RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 PALD1Q9ULE6 856 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.62□□□□□ -0.23
TCF4-248ENST00000616053 GPR1P46091 355 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 GPATCH4Q5T3I0 446 aaKnown RBP13.62□□□□□ -0.23
TCF4-248ENST00000616053 DARS2Q6PI48 645 aaKnown RBP13.62□□□□□ -0.23
TCF4-248ENST00000616053 SPON2Q9BUD6 331 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 LSM7Q9UK45 103 aaKnown RBP13.62□□□□□ -0.23
TCF4-248ENST00000616053 JRKLQ9Y4A0 524 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 GAPVD1Q14C86 1478 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 MYH10P35580 1976 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 PRPSAP2O60256 369 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 TMTC3Q6ZXV5 915 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 CDHR1Q96JP9 859 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 CABS1Q96KC9 395 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 TRPC5Q9UL62 973 aaPredicted RBP13.62□□□□□ -0.23
TCF4-248ENST00000616053 KLHL24Q6TFL4 600 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 SPICE1Q8N0Z3 855 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 LRRC47Q8N1G4 583 aaKnown RBP13.62□□□□□ -0.23
TCF4-248ENST00000616053 HES6Q96HZ4 224 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 SENP2Q9HC62 589 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 PCDHA12Q9UN75 941 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 ALDH1L1O75891 902 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 ATP6V1C1P21283 382 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 MRPS15P82914 257 aaKnown RBP13.62□□□□□ -0.23
TCF4-248ENST00000616053 KRBA2Q6ZNG9 492 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 ACAP3Q96P50 834 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 DACT1Q9NYF0 836 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 TBC1D10BQ4KMP7 808 aaPredicted RBP13.62□□□□□ -0.23
TCF4-248ENST00000616053 NLRC4Q9NPP4 1024 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 HPS4Q9NQG7 708 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.62□□□□□ -0.23
TCF4-248ENST00000616053 PPARGC1AQ9UBK2 798 aaKnown RBP13.62□□□□□ -0.23
TCF4-248ENST00000616053 FANCD2Q9BXW9 1451 aa13.62□□□□□ -0.23
TCF4-248ENST00000616053 POC1B-GALNT4F8VUJ3 575 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 PAK2Q13177 524 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 KRT72Q14CN4 511 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 CCDC92Q53HC0 331 aaPredicted RBP13.61□□□□□ -0.23
TCF4-248ENST00000616053 NOSTRINQ8IVI9 506 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 DEPDC1BQ8WUY9 529 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 KMT5AQ9NQR1 393 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 COBLO75128 1261 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.61□□□□□ -0.23
TCF4-248ENST00000616053 LRRC8CQ8TDW0 803 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 CALN1Q9BXU9 219 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 EVA1BQ9NVM1 165 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 PA2G4Q9UQ80 394 aaKnown RBP13.61□□□□□ -0.23
TCF4-248ENST00000616053 ARHGEF9O43307 516 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 TRPA1O75762 1119 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 C1orf131Q8NDD1 294 aaKnown RBP13.61□□□□□ -0.23
TCF4-248ENST00000616053 PPP1R13BQ96KQ4 1090 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 ARHGAP26Q9UNA1 814 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 SPATA16Q9BXB7 569 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 NPY2RP49146 381 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 PPP2R3AQ06190 1150 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 TRIM8Q9BZR9 551 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 TSKSQ9UJT2 592 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 AKNAQ7Z591 1439 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 PRRG1O14668 218 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 RC3H1Q5TC82 1133 aaKnown RBP13.61□□□□□ -0.23
TCF4-248ENST00000616053 RRAGAQ7L523 313 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 KCTD17Q8N5Z5 321 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 UTP6Q9NYH9 597 aaKnown RBP13.61□□□□□ -0.23
TCF4-248ENST00000616053 AATKQ6ZMQ8 1374 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 DISP3Q9P2K9 1392 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 CCDC151A5D8V7 595 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 C5orf58C9J3I9 102 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 CFLARO15519 480 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 DYNLT1P63172 113 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 TMEM161AQ9NX61 479 aa13.61□□□□□ -0.23
TCF4-248ENST00000616053 POLR2DO15514 142 aaKnown RBP13.6□□□□□ -0.23
TCF4-248ENST00000616053 HPCAP84074 193 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 SIX5Q8N196 739 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 SP110Q9HB58 689 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 ABI2Q9NYB9 513 aaPredicted RBP13.6□□□□□ -0.23
TCF4-248ENST00000616053 L3MBTL1Q9Y468 752 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 MAGEB5Q9BZ81 275 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 RNF181Q9P0P0 153 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 TUBB4AP04350 444 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 KPNA1P52294 538 aaPredicted RBP13.6□□□□□ -0.23
TCF4-248ENST00000616053 LRRC74AQ0VAA2 488 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 UPF3AQ9H1J1 476 aaKnown RBP13.6□□□□□ -0.23
TCF4-248ENST00000616053 PLEKHA4Q9H4M7 779 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 ABCC11Q96J66 1382 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 TOM1L1O75674 476 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 RAD17O75943 681 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 SAMSN1Q9NSI8 373 aaKnown RBP13.6□□□□□ -0.23
TCF4-248ENST00000616053 HDAC4P56524 1084 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 UBE3AQ05086 875 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 TOMM20Q15388 145 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 LVRNQ6Q4G3 990 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 TMEM87BQ96K49 555 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 PCDHGA4Q9Y5G9 962 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 CCDC141Q6ZP82 1450 aa13.6□□□□□ -0.23
TCF4-248ENST00000616053 FYNP06241 537 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 SH3BGRP55822 239 aaPredicted RBP13.59□□□□□ -0.23
TCF4-248ENST00000616053 ITPRIPL1Q6GPH6 555 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 DHX32Q7L7V1 743 aaKnown RBP13.59□□□□□ -0.23
TCF4-248ENST00000616053 CAMKK1Q8N5S9 505 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 KDM2BQ8NHM5 1336 aa13.59□□□□□ -0.23
TCF4-248ENST00000616053 SNTNA6NMZ2 147 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms