RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 RSAD2Q8WXG1 361 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 CCDC124Q96CT7 223 aaKnown RBP7.42□□□□□ -1.22
CLCN3-211ENST00000613795 TRIM11Q96F44 468 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 TRIM15Q9C019 465 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 PFDN4Q9NQP4 134 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 LCMT1Q9UIC8 334 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 INTUQ9ULD6 942 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.42□□□□□ -1.22
CLCN3-211ENST00000613795 SERPINI2O75830 405 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 PRPF6O94906 941 aaKnown RBP7.42□□□□□ -1.22
CLCN3-211ENST00000613795 MOCS3O95396 460 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 POLR2MP0CAP2 368 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 GARSP41250 739 aaKnown RBP7.42□□□□□ -1.22
CLCN3-211ENST00000613795 RESTQ13127 1097 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 ASPRV1Q53RT3 343 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 CYB5D1Q6P9G0 228 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 ARHGAP22Q7Z5H3 698 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 LCA5Q86VQ0 697 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 MYOCDQ8IZQ8 938 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 BLIDQ8IZY5 108 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 HIC2Q96JB3 615 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.42□□□□□ -1.22
CLCN3-211ENST00000613795 NOD1Q9Y239 953 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 GOLGA8CPA6NN73 597 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 PFDN6O15212 129 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 NVLO15381 856 aaKnown RBP7.42□□□□□ -1.22
CLCN3-211ENST00000613795 HAUS5O94927 633 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 INHBAP08476 426 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 FBLN1P23142 703 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 PLA2G4AP47712 749 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 MAGOHP61326 146 aaKnown RBP7.42□□□□□ -1.22
CLCN3-211ENST00000613795 SLC7A5Q01650 507 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 DR1Q01658 176 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 TMED2Q15363 201 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 MMEL1Q495T6 779 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 CDC42BPGQ6DT37 1551 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 PODNQ7Z5L7 613 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 TEKT3Q9BXF9 490 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 NOD2Q9HC29 1040 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 COPRSQ9NQ92 184 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 ARL2BPQ9Y2Y0 163 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 ORC6Q9Y5N6 252 aa7.42□□□□□ -1.22
CLCN3-211ENST00000613795 DAPK3O43293 454 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 XRCC5P13010 732 aaKnown RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 GAP43P17677 238 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 IL6STP40189 918 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 TIMM10P62072 90 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 VSNL1P62760 191 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 ZNF827Q17R98 1081 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 CC2D2BQ6DHV5 1058 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 NUDCD3Q8IVD9 361 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 ZNF654Q8IZM8 581 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 NLGN1Q8N2Q7 840 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 PPWD1Q96BP3 646 aaKnown RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 CNOT6LQ96LI5 555 aaKnown RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 TRIM56Q9BRZ2 755 aaKnown RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 VCPKMTQ9H867 229 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 MRPL44Q9H9J2 332 aaKnown RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 USP21Q9UK80 565 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 HPCAL4Q9UM19 191 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 ADCY9O60503 1353 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 MAGEA13PA6NCF6 341 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 ERVV-1B6SEH8 477 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 EXOC3O60645 756 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 FAM107AO95990 144 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 HSPA8P11142 646 aaKnown RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 CA8P35219 290 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 ZAP70P43403 619 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 BPIFB4P59827 614 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 KPNB1Q14974 876 aaKnown RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 HERC4Q5GLZ8 1057 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 TCP11X2Q5H9J9 407 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 PPP4R4Q6NUP7 873 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 LRRC31Q6UY01 552 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 ZNF513Q8N8E2 541 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 ZFATQ9P243 1243 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 ZBTB21Q9ULJ3 1066 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 CSADQ9Y600 493 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 PRDM15P57071 1507 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 ARHGEF37A1IGU5 675 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 IPO5O00410 1097 aaKnown RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 XPOTO43592 962 aaKnown RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 HSPA9P38646 679 aaKnown RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 POLR2FP61218 127 aaKnown RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 TFDP1Q14186 410 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 RPS6KA2Q15349 733 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 GPATCH4Q5T3I0 446 aaKnown RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 ZNF658Q5TYW1 1059 aaPredicted RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 NXNQ6DKJ4 435 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 GDAP1Q8TB36 358 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 HINFPQ9BQA5 517 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 FTOQ9C0B1 505 aaKnown RBP eCLIP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 L2HGDHQ9H9P8 463 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 PAPOLBQ9NRJ5 636 aaKnown RBP7.41□□□□□ -1.22
CLCN3-211ENST00000613795 FHOD1Q9Y613 1164 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 A2ML1A8K2U0 1454 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 XDHP47989 1333 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 SMCO2A6NFE2 343 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 POC1B-GALNT4F8VUJ3 575 aa7.41□□□□□ -1.22
CLCN3-211ENST00000613795 CCDC159P0C7I6 412 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms