RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 SP2Q02086 613 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 TRIM32Q13049 653 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 LY6KQ17RY6 165 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 SLC9C1Q4G0N8 1177 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 DUSP28Q4G0W2 176 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 MAP3K21Q5TCX8 1036 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 DHX37Q8IY37 1157 aaKnown RBP16.6■□□□□ 0.25
CD48-203ENST00000613788 UIMC1Q96RL1 719 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 RAB34Q9BZG1 259 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 MLXIPQ9HAP2 919 aa16.6■□□□□ 0.25
CD48-203ENST00000613788 SRPRBQ9Y5M8 271 aaKnown RBP16.6■□□□□ 0.25
CD48-203ENST00000613788 DHX15O43143 795 aaKnown RBP16.59■□□□□ 0.25
CD48-203ENST00000613788 SEPT4O43236 478 aa16.59■□□□□ 0.25
CD48-203ENST00000613788 PSMD10O75832 226 aa16.59■□□□□ 0.25
CD48-203ENST00000613788 ARIH2O95376 493 aa16.59■□□□□ 0.25
CD48-203ENST00000613788 UBA1P22314 1058 aaKnown RBP16.59■□□□□ 0.25
CD48-203ENST00000613788 CNGA1P29973 690 aa16.59■□□□□ 0.25
CD48-203ENST00000613788 ME1P48163 572 aa16.59■□□□□ 0.25
CD48-203ENST00000613788 ITGB3BPQ13352 177 aaPredicted RBP16.59■□□□□ 0.25
CD48-203ENST00000613788 PDIA5Q14554 519 aa16.59■□□□□ 0.25
CD48-203ENST00000613788 KRI1Q8N9T8 703 aaKnown RBP16.59■□□□□ 0.25
CD48-203ENST00000613788 TRPV1Q8NER1 839 aa16.59■□□□□ 0.25
CD48-203ENST00000613788 HMX1Q9NP08 348 aaPredicted RBP16.59■□□□□ 0.25
CD48-203ENST00000613788 LRRC37A2A6NM11 1700 aa16.58■□□□□ 0.24
CD48-203ENST00000613788 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.58■□□□□ 0.24
CD48-203ENST00000613788 VWA3AA6NCI4 1184 aa16.58■□□□□ 0.24
CD48-203ENST00000613788 GGPS1O95749 300 aa16.58■□□□□ 0.24
CD48-203ENST00000613788 GH1P01241 217 aa16.58■□□□□ 0.24
CD48-203ENST00000613788 SMPD1P17405 629 aa16.58■□□□□ 0.24
CD48-203ENST00000613788 TECP42680 631 aa16.58■□□□□ 0.24
CD48-203ENST00000613788 FXR2P51116 673 aaKnown RBP eCLIP16.58■□□□□ 0.24
CD48-203ENST00000613788 KRT76Q01546 638 aa16.58■□□□□ 0.24
CD48-203ENST00000613788 LAMC2Q13753 1193 aa16.58■□□□□ 0.24
CD48-203ENST00000613788 CELF3Q5SZQ8 465 aaKnown RBP16.58■□□□□ 0.24
CD48-203ENST00000613788 METTL7BQ6UX53 244 aa16.58■□□□□ 0.24
CD48-203ENST00000613788 CYFIP1Q7L576 1253 aa16.58■□□□□ 0.24
CD48-203ENST00000613788 SH3TC2Q8TF17 1288 aa16.58■□□□□ 0.24
CD48-203ENST00000613788 GJA10Q969M2 543 aa16.58■□□□□ 0.24
CD48-203ENST00000613788 JPH1Q9HDC5 661 aaPredicted RBP16.58■□□□□ 0.24
CD48-203ENST00000613788 SLC9A2Q9UBY0 812 aa16.58■□□□□ 0.24
CD48-203ENST00000613788 Q9Y3F1 56 aa16.58■□□□□ 0.24
CD48-203ENST00000613788 MCM3APO60318 1980 aa16.58■□□□□ 0.24
CD48-203ENST00000613788 LONP1P36776 959 aaKnown RBP16.57■□□□□ 0.24
CD48-203ENST00000613788 PPP2R5CQ13362 524 aa16.57■□□□□ 0.24
CD48-203ENST00000613788 ZNF746Q6NUN9 644 aaPredicted RBP16.57■□□□□ 0.24
CD48-203ENST00000613788 AK8Q96MA6 479 aa16.57■□□□□ 0.24
CD48-203ENST00000613788 GDPD2Q9HCC8 539 aa16.57■□□□□ 0.24
CD48-203ENST00000613788 FBXO2Q9UK22 296 aaPredicted RBP16.57■□□□□ 0.24
CD48-203ENST00000613788 MYH15Q9Y2K3 1946 aa16.57■□□□□ 0.24
CD48-203ENST00000613788 ELP1O95163 1332 aa16.57■□□□□ 0.24
CD48-203ENST00000613788 KIAA1217Q5T5P2 1943 aa16.56■□□□□ 0.24
CD48-203ENST00000613788 DDX39AO00148 427 aaKnown RBP16.56■□□□□ 0.24
CD48-203ENST00000613788 MSCO60682 206 aa16.56■□□□□ 0.24
CD48-203ENST00000613788 CUTAO60888 179 aa16.56■□□□□ 0.24
CD48-203ENST00000613788 DUSP11O75319 330 aaKnown RBP16.56■□□□□ 0.24
CD48-203ENST00000613788 FARP2O94887 1054 aaPredicted RBP16.56■□□□□ 0.24
CD48-203ENST00000613788 CCND3P30281 292 aaPredicted RBP16.56■□□□□ 0.24
CD48-203ENST00000613788 IL17AQ16552 155 aa16.56■□□□□ 0.24
CD48-203ENST00000613788 COPS5Q92905 334 aa16.56■□□□□ 0.24
CD48-203ENST00000613788 EMID1Q96A84 441 aaPredicted RBP16.56■□□□□ 0.24
CD48-203ENST00000613788 LRWD1Q9UFC0 647 aa16.56■□□□□ 0.24
CD48-203ENST00000613788 VAV3Q9UKW4 847 aa16.56■□□□□ 0.24
CD48-203ENST00000613788 PCDHA7Q9UN72 937 aa16.56■□□□□ 0.24
CD48-203ENST00000613788 GNEQ9Y223 722 aaKnown RBP16.56■□□□□ 0.24
CD48-203ENST00000613788 STK24Q9Y6E0 443 aa16.56■□□□□ 0.24
CD48-203ENST00000613788 GOLGA6L22H0YM25 854 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 RARBP10826 455 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 SFNP31947 248 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 ARHGAP1Q07960 439 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 TMEM63BQ5T3F8 832 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 B3GNT9Q6UX72 402 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 SMAP1Q8IYB5 467 aaPredicted RBP16.55■□□□□ 0.24
CD48-203ENST00000613788 IGSF22Q8N9C0 903 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 ZNF579Q8NAF0 562 aaKnown RBP16.55■□□□□ 0.24
CD48-203ENST00000613788 RDM1Q8NG50 284 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 OR6J1Q8NGC5 347 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 SPATA33Q96N06 139 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 AP5M1Q9H0R1 490 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 UNC45AQ9H3U1 944 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 BCAS3Q9H6U6 928 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 SPC25Q9HBM1 224 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 SAMM50Q9Y512 469 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 GOLGA6L4A6NEF3 574 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 NOP56O00567 594 aaKnown RBP16.55■□□□□ 0.24
CD48-203ENST00000613788 DYNC1LI2O43237 492 aaPredicted RBP16.55■□□□□ 0.24
CD48-203ENST00000613788 JAK3P52333 1124 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 SPIRE1Q08AE8 756 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 GJC2Q5T442 439 aaPredicted RBP16.55■□□□□ 0.24
CD48-203ENST00000613788 ADALQ6DHV7 355 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 NCAPH2Q6IBW4 605 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 MIER3Q7Z3K6 550 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 TLK2Q86UE8 772 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 TMEM87AQ8NBN3 555 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 SEPT1Q8WYJ6 367 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 CSRNP2Q9H175 543 aa16.55■□□□□ 0.24
CD48-203ENST00000613788 DDX20Q9UHI6 824 aaKnown RBP16.55■□□□□ 0.24
CD48-203ENST00000613788 WDR64B1ANS9 1081 aa16.54■□□□□ 0.24
CD48-203ENST00000613788 ADCY6O43306 1168 aa16.54■□□□□ 0.24
CD48-203ENST00000613788 CHMP2AO43633 222 aa16.54■□□□□ 0.24
CD48-203ENST00000613788 SORBS3O60504 671 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms