RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 DEFB132Q7Z7B7 95 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 PNMA5Q96PV4 448 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 CSRNP1Q96S65 589 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 PSTPIP2Q9H939 334 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 CLRN2A0PK11 232 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 TCP10L2B9ZVM9 353 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 F5H6K3 240 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 NDUFB10O96000 172 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 HNRNPH1P31943 449 aaKnown RBP13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 SNAP25P60880 206 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 KLRC3Q07444 240 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 DHTKD1Q96HY7 919 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 CNOT6LQ96LI5 555 aaKnown RBP13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 TUBGCP2Q9BSJ2 902 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 CRACR2AQ9BSW2 395 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 ZNF277Q9NRM2 450 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 PSME4Q14997 1843 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 MYMKA6NI61 221 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 USP17L15C9J2P7 530 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 USP17L13C9JLJ4 530 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 USP17L11C9JVI0 530 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 USP17L18D6R9N7 530 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 USP17L22D6RA61 530 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 USP17L17D6RBQ6 530 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 USP17L19D6RCP7 530 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 USP17L20D6RJB6 530 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 PSMD14O00487 310 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 DPEP1P16444 411 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 CCNE1P24864 410 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 ARHGAP25P42331 645 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 LIG3P49916 1009 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 MNAT1P51948 309 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 USP17L24Q0WX57 530 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 PPFIA1Q13136 1202 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 USP17L6PQ6QN14 398 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 TRAPPC11Q7Z392 1133 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 KCNK18Q7Z418 384 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 A1CFQ9NQ94 594 aaKnown RBP13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 TRIM10Q9UDY6 481 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 TFR2Q9UP52 801 aa13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 ATF5Q9Y2D1 282 aaPredicted RBP13.98□□□□□ -0.17
PCDHGA4-202ENST00000612927 ARFGEF1Q9Y6D6 1849 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 COL2A1P02458 1487 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 SHTN1A0MZ66 631 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 SPDYE2BA6NHP3 402 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 SPDYE6P0CI01 402 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 KCNA3P22001 575 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 CCT5P48643 541 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 IRAK1P51617 712 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 PPP4R3AQ6IN85 833 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 SNX29Q8TEQ0 813 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 CCDC47Q96A33 483 aaKnown RBP13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 CDK5RAP3Q96JB5 506 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 DDX25Q9UHL0 483 aaKnown RBP13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 REXO2Q9Y3B8 237 aaKnown RBP13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 PCDHA1Q9Y5I3 950 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 A6NNZ2 444 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 TMEM266Q2M3C6 531 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 TUBB8Q3ZCM7 444 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 RBM26Q5T8P6 1007 aaKnown RBP13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 SV2BQ7L1I2 683 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 LARGE2Q8N3Y3 721 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 GMCL1P1Q8NEA9 526 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 LARP4BQ92615 738 aaKnown RBP13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 GMLQ99445 158 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 SEMA6BQ9H3T3 888 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 AGPAT5Q9NUQ2 364 aa13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 LUC7L2Q9Y383 392 aaKnown RBP13.97□□□□□ -0.17
PCDHGA4-202ENST00000612927 A0A1W2PRG0 241 aa13.96□□□□□ -0.17
PCDHGA4-202ENST00000612927 GOLGA6CA6NDK9 693 aa13.96□□□□□ -0.17
PCDHGA4-202ENST00000612927 GOLGA6DP0CG33 693 aa13.96□□□□□ -0.17
PCDHGA4-202ENST00000612927 TAL1P17542 331 aaPredicted RBP13.96□□□□□ -0.17
PCDHGA4-202ENST00000612927 SETQ01105 290 aaPredicted RBP13.96□□□□□ -0.17
PCDHGA4-202ENST00000612927 NCAPH2Q6IBW4 605 aa13.96□□□□□ -0.17
PCDHGA4-202ENST00000612927 KCNV1Q6PIU1 500 aa13.96□□□□□ -0.17
PCDHGA4-202ENST00000612927 RTKN2Q8IZC4 609 aa13.96□□□□□ -0.17
PCDHGA4-202ENST00000612927 HAS1Q92839 578 aa13.96□□□□□ -0.17
PCDHGA4-202ENST00000612927 PSMD1Q99460 953 aa13.96□□□□□ -0.17
PCDHGA4-202ENST00000612927 GOLGA6AQ9NYA3 693 aa13.96□□□□□ -0.17
PCDHGA4-202ENST00000612927 A0A1W2PQC6 194 aa13.96□□□□□ -0.18
PCDHGA4-202ENST00000612927 ERCC3P19447 782 aa13.96□□□□□ -0.18
PCDHGA4-202ENST00000612927 INPP5BP32019 993 aa13.96□□□□□ -0.18
PCDHGA4-202ENST00000612927 GGCXP38435 758 aa13.96□□□□□ -0.18
PCDHGA4-202ENST00000612927 MTIF2P46199 727 aaKnown RBP13.96□□□□□ -0.18
PCDHGA4-202ENST00000612927 AMPD3Q01432 767 aa13.96□□□□□ -0.18
PCDHGA4-202ENST00000612927 CKAP4Q07065 602 aaKnown RBP13.96□□□□□ -0.18
PCDHGA4-202ENST00000612927 ECM1Q16610 540 aa13.96□□□□□ -0.18
PCDHGA4-202ENST00000612927 WDR59Q6PJI9 974 aa13.96□□□□□ -0.18
PCDHGA4-202ENST00000612927 GLIS3Q8NEA6 775 aa13.96□□□□□ -0.18
PCDHGA4-202ENST00000612927 OR8K1Q8NGG5 319 aa13.96□□□□□ -0.18
PCDHGA4-202ENST00000612927 GMCL1Q96IK5 515 aa13.96□□□□□ -0.18
PCDHGA4-202ENST00000612927 MYH7BA7E2Y1 1941 aa13.95□□□□□ -0.18
PCDHGA4-202ENST00000612927 BICDL2A1A5D9 508 aa13.95□□□□□ -0.18
PCDHGA4-202ENST00000612927 RASSF10A6NK89 507 aa13.95□□□□□ -0.18
PCDHGA4-202ENST00000612927 EIF3HO15372 352 aaKnown RBP eCLIP13.95□□□□□ -0.18
PCDHGA4-202ENST00000612927 NDUFA10O95299 355 aa13.95□□□□□ -0.18
PCDHGA4-202ENST00000612927 VIL1P09327 827 aaKnown RBP13.95□□□□□ -0.18
PCDHGA4-202ENST00000612927 IDEP14735 1019 aa13.95□□□□□ -0.18
PCDHGA4-202ENST00000612927 TRIM21P19474 475 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms