RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 SF3B2Q13435 895 aaKnown RBP16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 RAPGEF1Q13905 1077 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 CDC37Q16543 378 aaPredicted RBP16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 TUBB8Q3ZCM7 444 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 CEP85LQ5SZL2 805 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 CD302Q8IX05 232 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 TSG101Q99816 390 aa16.65■□□□□ 0.26
PCDHGB1-202ENST00000611598 FXR2P51116 673 aaKnown RBP eCLIP16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 FAM133AQ8N9E0 248 aa16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 OR2W6PQ8NHA6 318 aa16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 MYCBPAPQ8TBZ2 947 aa16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 CCT8L2Q96SF2 557 aa16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 LZTS2Q9BRK4 669 aa16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 EDEM3Q9BZQ6 932 aa16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 CENPHQ9H3R5 247 aa16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 SEC63Q9UGP8 760 aaKnown RBP16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 ATXN2Q99700 1313 aaKnown RBP16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 MDH1P40925 334 aaKnown RBP16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 ERVK-9P63128 1117 aa16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 COASYQ13057 564 aa16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 SLC18A3Q16572 532 aa16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 NELFCDQ8IXH7 590 aa16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 MYOCDQ8IZQ8 938 aa16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 USP38Q8NB14 1042 aa16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 COA7Q96BR5 231 aa16.64■□□□□ 0.25
PCDHGB1-202ENST00000611598 CCDC88AQ3V6T2 1871 aa16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 H0YHG0 523 aa16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 FSBPO95073 299 aa16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 FKBP3Q00688 224 aaKnown RBP16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 EMC10Q5UCC4 262 aa16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 TBC1D9BQ66K14 1250 aa16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 NLRP14Q86W24 1093 aa16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 DDX42Q86XP3 938 aaKnown RBP eCLIP16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 WHAMMQ8TF30 809 aa16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 UIMC1Q96RL1 719 aa16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 NCAPGQ9BPX3 1015 aa16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 SNED1Q8TER0 1413 aa16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 MAST2Q6P0Q8 1798 aa16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 LDHBP07195 334 aaKnown RBP16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 ECHS1P30084 290 aa16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 HLTFQ14527 1009 aaKnown RBP eCLIP16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 DNAJC19Q96DA6 116 aa16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 EYA3Q99504 573 aa16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 RIC8AQ9NPQ8 531 aa16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 GEMIN8Q9NWZ8 242 aaKnown RBP16.63■□□□□ 0.25
PCDHGB1-202ENST00000611598 MYBP10242 640 aa16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 HSPA9P38646 679 aaKnown RBP16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 CACNB1Q02641 598 aaPredicted RBP16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 KLHL30Q0D2K2 578 aa16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 TMEM266Q2M3C6 531 aa16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 RNF187Q5TA31 235 aaPredicted RBP16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 FRMPD2Q68DX3 1309 aaPredicted RBP16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 LOC102724159A0A0B4J2E5 919 aa16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 USP17L5A8MUK1 530 aa16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 E7EVH7 732 aa16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 KCNK3O14649 394 aa16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 PWP2Q15269 919 aaKnown RBP16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 UAP1Q16222 522 aaPredicted RBP16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 TMEM119Q4V9L6 283 aa16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 KRT79Q5XKE5 535 aa16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 CLEC4GQ6UXB4 293 aa16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 PROM2Q8N271 834 aa16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 SYN2Q92777 582 aaPredicted RBP16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 TAF1DQ9H5J8 278 aaPredicted RBP16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 PPANQ9NQ55 473 aaKnown RBP16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 TMEM59LQ9UK28 342 aa16.62■□□□□ 0.25
PCDHGB1-202ENST00000611598 HMGB1P1B2RPK0 211 aaPredicted RBP16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 SSBP05455 408 aaKnown RBP eCLIP16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 HSD17B3P37058 310 aa16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 CDK8P49336 464 aa16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 IFT88Q13099 833 aa16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 GPATCH11Q8N954 259 aa16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 CEP95Q96GE4 821 aa16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 PAGR1Q9BTK6 254 aa16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 NEUROG2Q9H2A3 272 aa16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 TMBIM4Q9HC24 238 aa16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 TNNC1P63316 161 aa16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 FAM26FQ5R3K3 315 aa16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 SPTY2D1Q68D10 685 aaPredicted RBP16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 CABS1Q96KC9 395 aa16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 NUCKS1Q9H1E3 243 aaKnown RBP16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 PANK4Q9NVE7 773 aa16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.61■□□□□ 0.25
PCDHGB1-202ENST00000611598 IRS2Q9Y4H2 1338 aa16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 NPHP3-ACAD11A0A0J9YXS1 232 aa16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 ACTN1P12814 892 aa16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 PSMD2Q13200 908 aa16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 TRIM59Q8IWR1 403 aa16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 AP1M1Q9BXS5 423 aa16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 LUC7LQ9NQ29 371 aaKnown RBP16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 H0YGN5 161 aa16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 FAM107AO95990 144 aa16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 TNNI2P48788 182 aa16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 UBE2SQ16763 222 aa16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 SPATS2Q86XZ4 545 aaKnown RBP16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 GPR101Q96P66 508 aaPredicted RBP16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 ANKRD2Q9GZV1 360 aa16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 ISCUQ9H1K1 167 aa16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 GANQ9H2C0 597 aa16.6■□□□□ 0.25
PCDHGB1-202ENST00000611598 PLCB1Q9NQ66 1216 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms