RNA–Protein interactions for RNA: ENST00000611127.4

FAM228B-205, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-205ENST00000611127 SHISA5Q8N114 240 aa9.5□□□□□ -0.89
FAM228B-205ENST00000611127 WDR66Q8TBY9 1149 aa9.5□□□□□ -0.89
FAM228B-205ENST00000611127 FRMD6Q96NE9 622 aa9.5□□□□□ -0.89
FAM228B-205ENST00000611127 NECAB3Q96P71 396 aaPredicted RBP9.5□□□□□ -0.89
FAM228B-205ENST00000611127 DISC1Q9NRI5 854 aa9.5□□□□□ -0.89
FAM228B-205ENST00000611127 COL1A1P02452 1464 aaPredicted RBP9.49□□□□□ -0.89
FAM228B-205ENST00000611127 CLRN2A0PK11 232 aa9.49□□□□□ -0.89
FAM228B-205ENST00000611127 UBE2Q2LH0YL09 131 aa9.49□□□□□ -0.89
FAM228B-205ENST00000611127 CRKP46108 304 aa9.49□□□□□ -0.89
FAM228B-205ENST00000611127 ERVK-24P63145 666 aa9.49□□□□□ -0.89
FAM228B-205ENST00000611127 KIF23Q02241 960 aaPredicted RBP9.49□□□□□ -0.89
FAM228B-205ENST00000611127 ZNF252P-AS1Q0IIN9 211 aa9.49□□□□□ -0.89
FAM228B-205ENST00000611127 TNFAIP1Q13829 316 aa9.49□□□□□ -0.89
FAM228B-205ENST00000611127 ATP2B3Q16720 1220 aa9.49□□□□□ -0.89
FAM228B-205ENST00000611127 FTSJ3Q8IY81 847 aaKnown RBP9.49□□□□□ -0.89
FAM228B-205ENST00000611127 AGBL5Q8NDL9 886 aa9.49□□□□□ -0.89
FAM228B-205ENST00000611127 VEZTQ9HBM0 779 aa9.49□□□□□ -0.89
FAM228B-205ENST00000611127 PCOLCE2Q9UKZ9 415 aa9.49□□□□□ -0.89
FAM228B-205ENST00000611127 PA2G4Q9UQ80 394 aaKnown RBP9.49□□□□□ -0.89
FAM228B-205ENST00000611127 PCDHAC2Q9Y5I4 1007 aa9.49□□□□□ -0.89
FAM228B-205ENST00000611127 UNCXA6NJT0 531 aa9.48□□□□□ -0.89
FAM228B-205ENST00000611127 DYNC1LI2O43237 492 aaPredicted RBP9.48□□□□□ -0.89
FAM228B-205ENST00000611127 TNNI2P48788 182 aa9.48□□□□□ -0.89
FAM228B-205ENST00000611127 RASA3Q14644 834 aa9.48□□□□□ -0.89
FAM228B-205ENST00000611127 COL19A1Q14993 1142 aa9.48□□□□□ -0.89
FAM228B-205ENST00000611127 DNAJC14Q6Y2X3 702 aaPredicted RBP9.48□□□□□ -0.89
FAM228B-205ENST00000611127 MOB2Q70IA6 237 aa9.48□□□□□ -0.89
FAM228B-205ENST00000611127 RASAL3Q86YV0 1011 aa9.48□□□□□ -0.89
FAM228B-205ENST00000611127 STK11IPQ8N1F8 1099 aa9.48□□□□□ -0.89
FAM228B-205ENST00000611127 TMEM57Q8N5G2 664 aa9.48□□□□□ -0.89
FAM228B-205ENST00000611127 TEKT1Q969V4 418 aa9.48□□□□□ -0.89
FAM228B-205ENST00000611127 TDRD3Q9H7E2 651 aaKnown RBP9.48□□□□□ -0.89
FAM228B-205ENST00000611127 SAGE1Q9NXZ1 904 aa9.48□□□□□ -0.89
FAM228B-205ENST00000611127 CACNA2D2Q9NY47 1150 aa9.48□□□□□ -0.89
FAM228B-205ENST00000611127 ZNF70Q9UC06 446 aaPredicted RBP9.48□□□□□ -0.89
FAM228B-205ENST00000611127 DENND2AQ9ULE3 1009 aa9.48□□□□□ -0.89
FAM228B-205ENST00000611127 TNNQ9UQP3 1299 aa9.48□□□□□ -0.89
FAM228B-205ENST00000611127 MAST3O60307 1309 aa9.48□□□□□ -0.89
FAM228B-205ENST00000611127 SPEF2Q9C093 1822 aa9.47□□□□□ -0.89
FAM228B-205ENST00000611127 TAL1P17542 331 aaPredicted RBP9.47□□□□□ -0.89
FAM228B-205ENST00000611127 G3BP1Q13283 466 aaKnown RBP eCLIP9.47□□□□□ -0.89
FAM228B-205ENST00000611127 PRKG1Q13976 671 aa9.47□□□□□ -0.89
FAM228B-205ENST00000611127 LRRC14Q15048 493 aa9.47□□□□□ -0.89
FAM228B-205ENST00000611127 MAP3K11Q16584 847 aa9.47□□□□□ -0.89
FAM228B-205ENST00000611127 ZC3H12AQ5D1E8 599 aaKnown RBP9.47□□□□□ -0.89
FAM228B-205ENST00000611127 LDLRAD1Q5T700 205 aa9.47□□□□□ -0.89
FAM228B-205ENST00000611127 HHIPL2Q6UWX4 724 aa9.47□□□□□ -0.89
FAM228B-205ENST00000611127 RNF214Q8ND24 703 aa9.47□□□□□ -0.89
FAM228B-205ENST00000611127 MISP3Q96FF7 219 aa9.47□□□□□ -0.89
FAM228B-205ENST00000611127 ZDHHC15Q96MV8 337 aa9.47□□□□□ -0.89
FAM228B-205ENST00000611127 KRTAP9-2Q9BYQ4 174 aa9.47□□□□□ -0.89
FAM228B-205ENST00000611127 LRRC4CQ9HCJ2 640 aa9.47□□□□□ -0.89
FAM228B-205ENST00000611127 FAM8A1Q9UBU6 413 aa9.47□□□□□ -0.89
FAM228B-205ENST00000611127 ADGRE2Q9UHX3 823 aa9.47□□□□□ -0.89
FAM228B-205ENST00000611127 TXKP42681 527 aa9.46□□□□□ -0.9
FAM228B-205ENST00000611127 TIMM10P62072 90 aa9.46□□□□□ -0.9
FAM228B-205ENST00000611127 TFCP2Q12800 502 aa9.46□□□□□ -0.9
FAM228B-205ENST00000611127 TTLL4Q14679 1199 aa9.46□□□□□ -0.9
FAM228B-205ENST00000611127 NBPF12Q5TAG4 269 aaPredicted RBP9.46□□□□□ -0.9
FAM228B-205ENST00000611127 ZGPATQ8N5A5 531 aaKnown RBP9.46□□□□□ -0.9
FAM228B-205ENST00000611127 MKNK2Q9HBH9 465 aa9.46□□□□□ -0.9
FAM228B-205ENST00000611127 RNF186Q9NXI6 227 aa9.46□□□□□ -0.9
FAM228B-205ENST00000611127 TMOD2Q9NZR1 351 aa9.46□□□□□ -0.9
FAM228B-205ENST00000611127 ZC3H7BQ9UGR2 993 aaKnown RBP9.46□□□□□ -0.9
FAM228B-205ENST00000611127 PSME4Q14997 1843 aa9.46□□□□□ -0.9
FAM228B-205ENST00000611127 AOX1Q06278 1338 aa9.46□□□□□ -0.9
FAM228B-205ENST00000611127 THSD7BQ9C0I4 1608 aa9.45□□□□□ -0.9
FAM228B-205ENST00000611127 PNMA6EA0A0J9YXQ4 647 aa9.45□□□□□ -0.9
FAM228B-205ENST00000611127 A0A1B0GUL7 405 aa9.45□□□□□ -0.9
FAM228B-205ENST00000611127 TCP10L2B9ZVM9 353 aa9.45□□□□□ -0.9
FAM228B-205ENST00000611127 LDHBP07195 334 aaKnown RBP9.45□□□□□ -0.9
FAM228B-205ENST00000611127 PHKA1P46020 1223 aa9.45□□□□□ -0.9
FAM228B-205ENST00000611127 TM4SF4P48230 202 aa9.45□□□□□ -0.9
FAM228B-205ENST00000611127 ATP8B2P98198 1209 aa9.45□□□□□ -0.9
FAM228B-205ENST00000611127 MVPQ14764 893 aaKnown RBP9.45□□□□□ -0.9
FAM228B-205ENST00000611127 FKBP1CQ5VVH2 108 aa9.45□□□□□ -0.9
FAM228B-205ENST00000611127 APOBEC3HQ6NTF7 200 aaKnown RBP9.45□□□□□ -0.9
FAM228B-205ENST00000611127 ITPRIPQ8IWB1 547 aa9.45□□□□□ -0.9
FAM228B-205ENST00000611127 NEUROD6Q96NK8 337 aa9.45□□□□□ -0.9
FAM228B-205ENST00000611127 OSBPL7Q9BZF2 842 aa9.45□□□□□ -0.9
FAM228B-205ENST00000611127 CBX8Q9HC52 389 aa9.45□□□□□ -0.9
FAM228B-205ENST00000611127 SALL1Q9NSC2 1324 aa9.45□□□□□ -0.9
FAM228B-205ENST00000611127 TRPM7Q96QT4 1865 aa9.45□□□□□ -0.9
FAM228B-205ENST00000611127 ENC1O14682 589 aa9.44□□□□□ -0.9
FAM228B-205ENST00000611127 RNGTTO60942 597 aaKnown RBP9.44□□□□□ -0.9
FAM228B-205ENST00000611127 USP2O75604 605 aaPredicted RBP9.44□□□□□ -0.9
FAM228B-205ENST00000611127 ADORA1P30542 326 aa9.44□□□□□ -0.9
FAM228B-205ENST00000611127 INHBEP58166 350 aa9.44□□□□□ -0.9
FAM228B-205ENST00000611127 SREBF2Q12772 1141 aa9.44□□□□□ -0.9
FAM228B-205ENST00000611127 GORABQ5T7V8 394 aa9.44□□□□□ -0.9
FAM228B-205ENST00000611127 FAM83AQ86UY5 434 aa9.44□□□□□ -0.9
FAM228B-205ENST00000611127 TP53INP2Q8IXH6 220 aa9.44□□□□□ -0.9
FAM228B-205ENST00000611127 ANKRD13AQ8IZ07 590 aa9.44□□□□□ -0.9
FAM228B-205ENST00000611127 ABI1Q8IZP0 508 aa9.44□□□□□ -0.9
FAM228B-205ENST00000611127 STK35Q8TDR2 534 aa9.44□□□□□ -0.9
FAM228B-205ENST00000611127 SSH3Q8TE77 659 aa9.44□□□□□ -0.9
FAM228B-205ENST00000611127 HOOK2Q96ED9 719 aa9.44□□□□□ -0.9
FAM228B-205ENST00000611127 TEPSINQ96N21 525 aa9.44□□□□□ -0.9
FAM228B-205ENST00000611127 TMEM39BQ9GZU3 492 aa9.44□□□□□ -0.9
FAM228B-205ENST00000611127 C12orf49Q9H741 205 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms