RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 KRT26Q7Z3Y9 468 aa21.08■□□□□ 0.96
SEMA3B-210ENST00000611067 PRPF38AQ8NAV1 312 aaKnown RBP21.08■□□□□ 0.96
SEMA3B-210ENST00000611067 PI4KBQ9UBF8 816 aa21.08■□□□□ 0.96
SEMA3B-210ENST00000611067 PLAGL2Q9UPG8 496 aa21.08■□□□□ 0.96
SEMA3B-210ENST00000611067 BCS1LQ9Y276 419 aa21.08■□□□□ 0.96
SEMA3B-210ENST00000611067 SAMM50Q9Y512 469 aa21.08■□□□□ 0.96
SEMA3B-210ENST00000611067 PCDHA13Q9Y5I0 950 aa21.08■□□□□ 0.96
SEMA3B-210ENST00000611067 ZEB2O60315 1214 aa21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 AKR1B1P15121 316 aa21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 MIIPQ5JXC2 388 aa21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 TTC19Q6DKK2 380 aaPredicted RBP21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 P2RX5Q93086 422 aa21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 PRMT6Q96LA8 375 aaPredicted RBP21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 ALS2CR12Q96Q35 445 aa21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 NOC4LQ9BVI4 516 aaKnown RBP21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 MYH10P35580 1976 aa21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 ADAMTS3O15072 1205 aa21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 CALML3P27482 149 aa21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 SHMT1P34896 483 aa21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 MNAT1P51948 309 aa21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 GLE1Q53GS7 698 aaKnown RBP21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 CCDC181Q5TID7 509 aa21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 DTHD1Q6ZMT9 781 aa21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 RASSF8Q8NHQ8 419 aa21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 GMLQ99445 158 aa21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 MLXIPQ9HAP2 919 aa21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 ZBTB12Q9Y330 459 aaPredicted RBP21.07■□□□□ 0.96
SEMA3B-210ENST00000611067 MOCS3O95396 460 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 LCA5LO95447 670 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 MTIF2P46199 727 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 PDCLQ13371 301 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 DLGAP5Q15398 846 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 NFRKBQ6P4R8 1299 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 ZIM3Q96PE6 472 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 CCSER1Q9C0I3 900 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 MAD2L2Q9UI95 211 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 BAZ2BQ9UIF8 2168 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 LOC102724159A0A0B4J2E5 919 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 DDTLA6NHG4 134 aaPredicted RBP21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 SPDYE2BA6NHP3 402 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 CLSTN1O94985 981 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 PLEKP08567 350 aaPredicted RBP21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 SPDYE6P0CI01 402 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 PAFAH1B1P43034 410 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 MATR3P43243 847 aaKnown RBP eCLIP21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 PWP2Q15269 919 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 FKBP15Q5T1M5 1219 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 STAG2Q8N3U4 1231 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 AGBL3Q8NEM8 1001 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 MTMR4Q9NYA4 1195 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 ARHGAP20Q9P2F6 1191 aa21.06■□□□□ 0.96
SEMA3B-210ENST00000611067 MPHOSPH10O00566 681 aaKnown RBP21.05■□□□□ 0.96
SEMA3B-210ENST00000611067 ENTPD3O75355 529 aa21.05■□□□□ 0.96
SEMA3B-210ENST00000611067 APBA1Q02410 837 aa21.05■□□□□ 0.96
SEMA3B-210ENST00000611067 C8orf74Q6P047 294 aa21.05■□□□□ 0.96
SEMA3B-210ENST00000611067 BLIDQ8IZY5 108 aa21.05■□□□□ 0.96
SEMA3B-210ENST00000611067 CCDC17Q96LX7 622 aa21.05■□□□□ 0.96
SEMA3B-210ENST00000611067 PAGR1Q9BTK6 254 aa21.05■□□□□ 0.96
SEMA3B-210ENST00000611067 KIAA0754O94854 1291 aa21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 FSBPO95073 299 aa21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 UBA7P41226 1012 aa21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 PPP1R2P41236 205 aa21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 PTGER2P43116 358 aa21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 NOVP48745 357 aa21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 KIF11P52732 1056 aa21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 MRPS25P82663 173 aaKnown RBP21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 ANKRD40Q6AI12 368 aa21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 CCDC155Q8N6L0 562 aa21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 LZTS2Q9BRK4 669 aa21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 CAPN7Q9Y6W3 813 aa21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 MEFVO15553 781 aaPredicted RBP21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 VEGFAP15692 232 aaPredicted RBP21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 FNTAP49354 379 aa21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 CXCL9Q07325 125 aa21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 EMC10Q5UCC4 262 aa21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 TYW1BQ6NUM6 668 aa21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 KDM7AQ6ZMT4 941 aa21.04■□□□□ 0.96
SEMA3B-210ENST00000611067 PALM3A6NDB9 673 aaPredicted RBP21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 PP2D1A8MPX8 630 aa21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 NFKBIEO00221 500 aa21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 TTLL1O95922 423 aa21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 CIAPIN1Q6FI81 312 aa21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 OTUD6BQ8N6M0 293 aa21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 CCDC47Q96A33 483 aaKnown RBP21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 EEF2KMTQ96G04 330 aa21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 CUEDC2Q9H467 287 aa21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 MAGEF1Q9HAY2 307 aa21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 SIPA1L1O43166 1804 aa21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 IGKV6D-41A0A0C4DH26 115 aa21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 CXCR5P32302 372 aa21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 SH3BP5LQ7L8J4 393 aa21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 YTHDF3Q7Z739 585 aaKnown RBP21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 IQCKQ8N0W5 287 aa21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 DNAJC18Q9H819 358 aa21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 ATRNL1Q5VV63 1379 aa21.03■□□□□ 0.96
SEMA3B-210ENST00000611067 PJA2O43164 708 aa21.02■□□□□ 0.96
SEMA3B-210ENST00000611067 EIF6P56537 245 aaKnown RBP21.02■□□□□ 0.96
SEMA3B-210ENST00000611067 MICALCLQ6ZW33 695 aa21.02■□□□□ 0.96
SEMA3B-210ENST00000611067 IFT20Q8IY31 132 aa21.02■□□□□ 0.96
SEMA3B-210ENST00000611067 CABS1Q96KC9 395 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms