RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 SWAP70Q9UH65 585 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 MAPK8IP1Q9UQF2 711 aa13.13□□□□□ -0.31
TP53-220ENST00000610623 MYH10P35580 1976 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 KIF11P52732 1056 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 BYSLQ13895 437 aaKnown RBP13.12□□□□□ -0.31
TP53-220ENST00000610623 AGBL2Q5U5Z8 902 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 CDCA2Q69YH5 1023 aaPredicted RBP13.12□□□□□ -0.31
TP53-220ENST00000610623 FAM114A1Q8IWE2 563 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 NSMCE1Q8WV22 266 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 LMBR1Q8WVP7 490 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 CASKIN2Q8WXE0 1202 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 LRRC45Q96CN5 670 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 SPDL1Q96EA4 605 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 EHD2Q9NZN4 543 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 COL4A1P02462 1669 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 ERICH2A1L162 156 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 FAM205CA6NFA0 338 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 SPDYE5A6NIY4 337 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 ZPR1O75312 459 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 MYL1P05976 194 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 BCAMP50895 628 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 PPP2R2AP63151 447 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 TTC38Q5R3I4 469 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 FKBP15Q5T1M5 1219 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 TBC1D9BQ66K14 1250 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 DHX37Q8IY37 1157 aaKnown RBP13.12□□□□□ -0.31
TP53-220ENST00000610623 NOX5Q96PH1 765 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 SPAG5Q96R06 1193 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 SETDB2Q96T68 719 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 PSMB7Q99436 277 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 TAF1DQ9H5J8 278 aaPredicted RBP13.12□□□□□ -0.31
TP53-220ENST00000610623 C15orf41Q9Y2V0 281 aa13.12□□□□□ -0.31
TP53-220ENST00000610623 ESYT3A0FGR9 886 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 TTLL13PA6NNM8 815 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 H0YGN5 161 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 OPLAHO14841 1288 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 MBD4O95243 580 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 PMS1P54277 932 aaKnown RBP13.11□□□□□ -0.31
TP53-220ENST00000610623 SKIV2LQ15477 1246 aaKnown RBP13.11□□□□□ -0.31
TP53-220ENST00000610623 ZNF174Q15697 407 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 ACCSLQ4AC99 568 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 GRIPAP1Q4V328 841 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 AKNAD1Q5T1N1 836 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 KLHDC7AQ5VTJ3 777 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 HIBCHQ6NVY1 386 aaPredicted RBP13.11□□□□□ -0.31
TP53-220ENST00000610623 TTI2Q6NXR4 508 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 CPLX4Q7Z7G2 160 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 ZSCAN29Q8IWY8 852 aaPredicted RBP13.11□□□□□ -0.31
TP53-220ENST00000610623 TCP11Q8WWU5 503 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 RAPGEF5Q92565 580 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 DHTKD1Q96HY7 919 aaPredicted RBP13.11□□□□□ -0.31
TP53-220ENST00000610623 NACAP1Q9BZK3 213 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 NAPBQ9H115 298 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 ARHGAP20Q9P2F6 1191 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 BAIAP2L1Q9UHR4 511 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 CCNL1Q9UK58 526 aaPredicted RBP13.11□□□□□ -0.31
TP53-220ENST00000610623 RTCBQ9Y3I0 505 aaKnown RBP13.11□□□□□ -0.31
TP53-220ENST00000610623 NFS1Q9Y697 457 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 CFAP73A6NFT4 308 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 ORC4O43929 436 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 PPP1R7Q15435 360 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 EARS2Q5JPH6 523 aaKnown RBP13.11□□□□□ -0.31
TP53-220ENST00000610623 MFSD6Q6ZSS7 791 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 BZW1Q7L1Q6 419 aaKnown RBP13.11□□□□□ -0.31
TP53-220ENST00000610623 IFNL3Q8IZI9 196 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 KIRREL3Q8IZU9 778 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 ISCUQ9H1K1 167 aa13.11□□□□□ -0.31
TP53-220ENST00000610623 ZSCAN5CA6NGD5 496 aaPredicted RBP13.1□□□□□ -0.31
TP53-220ENST00000610623 CCT8L1PA6NM43 557 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 LIN7AO14910 233 aaPredicted RBP13.1□□□□□ -0.31
TP53-220ENST00000610623 AKR1B10O60218 316 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 TRIM37O94972 964 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 HSD17B3P37058 310 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 MAGEA1P43355 309 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 CUL1Q13616 776 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 ODF2Q5BJF6 829 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 CAVIN4Q5BKX8 364 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 TYW1BQ6NUM6 668 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 CSGALNACT2Q8N6G5 542 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 ANKS4BQ8N8V4 417 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 TBC1D31Q96DN5 1066 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 NLRP3Q96P20 1036 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 UBAC1Q9BSL1 405 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 CNOT10Q9H9A5 744 aaKnown RBP13.1□□□□□ -0.31
TP53-220ENST00000610623 CDHR5Q9HBB8 845 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 TAF1P21675 1872 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 BICDL2A1A5D9 508 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 SNAP23O00161 211 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 NCK2O43639 380 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 PLEKP08567 350 aaPredicted RBP13.1□□□□□ -0.31
TP53-220ENST00000610623 MYBP10242 640 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 TRAPPC10P48553 1259 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 KLK7P49862 253 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 RWDD2BP57060 319 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 TNNC1P63316 161 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 MYO1EQ12965 1108 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 MTMR3Q13615 1198 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 NBPF5PQ86XG9 351 aaPredicted RBP13.1□□□□□ -0.31
TP53-220ENST00000610623 C2CD5Q86YS7 1000 aa13.1□□□□□ -0.31
TP53-220ENST00000610623 CMTR1Q8N1G2 835 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms