RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 TMEM39AQ9NV64 488 aa16.27■□□□□ 0.2
HDDC2-206ENST00000608461 M0R2N6 131 aa16.26■□□□□ 0.19
HDDC2-206ENST00000608461 SYN1P17600 705 aa16.26■□□□□ 0.19
HDDC2-206ENST00000608461 NBPF20Q3BBV1 942 aa16.26■□□□□ 0.19
HDDC2-206ENST00000608461 PGBD1Q96JS3 809 aa16.26■□□□□ 0.19
HDDC2-206ENST00000608461 PRO3102Q9H379 93 aa16.26■□□□□ 0.19
HDDC2-206ENST00000608461 TBX21Q9UL17 535 aa16.26■□□□□ 0.19
HDDC2-206ENST00000608461 HAS3O00219 553 aa16.25■□□□□ 0.19
HDDC2-206ENST00000608461 ATP9AO75110 1047 aa16.25■□□□□ 0.19
HDDC2-206ENST00000608461 FDPSP14324 419 aaKnown RBP16.25■□□□□ 0.19
HDDC2-206ENST00000608461 PSMC6P62333 389 aa16.25■□□□□ 0.19
HDDC2-206ENST00000608461 HMGN5P82970 282 aaKnown RBP16.25■□□□□ 0.19
HDDC2-206ENST00000608461 NPY5RQ15761 445 aa16.25■□□□□ 0.19
HDDC2-206ENST00000608461 KRT25Q7Z3Z0 450 aa16.25■□□□□ 0.19
HDDC2-206ENST00000608461 KAT2BQ92831 832 aa16.25■□□□□ 0.19
HDDC2-206ENST00000608461 GPR20Q99678 358 aa16.25■□□□□ 0.19
HDDC2-206ENST00000608461 SDF4Q9BRK5 362 aa16.25■□□□□ 0.19
HDDC2-206ENST00000608461 ALG1Q9BT22 464 aa16.25■□□□□ 0.19
HDDC2-206ENST00000608461 BRMS1Q9HCU9 246 aa16.25■□□□□ 0.19
HDDC2-206ENST00000608461 PRDM5Q9NQX1 630 aaPredicted RBP16.25■□□□□ 0.19
HDDC2-206ENST00000608461 IGLV3-22A0A075B6J6 115 aa16.24■□□□□ 0.19
HDDC2-206ENST00000608461 TRIM43BA6NCK2 446 aa16.24■□□□□ 0.19
HDDC2-206ENST00000608461 FAM86B1E9PN63 330 aa16.24■□□□□ 0.19
HDDC2-206ENST00000608461 H3BRB1 525 aa16.24■□□□□ 0.19
HDDC2-206ENST00000608461 TIMP1P01033 207 aa16.24■□□□□ 0.19
HDDC2-206ENST00000608461 FAM86B2P0C5J1 330 aa16.24■□□□□ 0.19
HDDC2-206ENST00000608461 RAG1P15918 1043 aa16.24■□□□□ 0.19
HDDC2-206ENST00000608461 MAGEA10P43363 369 aaPredicted RBP16.24■□□□□ 0.19
HDDC2-206ENST00000608461 MOXD1Q6UVY6 613 aa16.24■□□□□ 0.19
HDDC2-206ENST00000608461 CHRDL2Q6WN34 429 aa16.24■□□□□ 0.19
HDDC2-206ENST00000608461 CYP2W1Q8TAV3 490 aa16.24■□□□□ 0.19
HDDC2-206ENST00000608461 SEPT1Q8WYJ6 367 aa16.24■□□□□ 0.19
HDDC2-206ENST00000608461 TRIM43Q96BQ3 446 aaPredicted RBP16.24■□□□□ 0.19
HDDC2-206ENST00000608461 AIFM3Q96NN9 605 aa16.24■□□□□ 0.19
HDDC2-206ENST00000608461 C16orf70Q9BSU1 422 aa16.24■□□□□ 0.19
HDDC2-206ENST00000608461 TUT1Q9H6E5 874 aaKnown RBP16.24■□□□□ 0.19
HDDC2-206ENST00000608461 AGO4Q9HCK5 861 aaKnown RBP16.24■□□□□ 0.19
HDDC2-206ENST00000608461 JPH1Q9HDC5 661 aaPredicted RBP16.24■□□□□ 0.19
HDDC2-206ENST00000608461 TBC1D22BQ9NU19 505 aa16.24■□□□□ 0.19
HDDC2-206ENST00000608461 ZNF215Q9UL58 517 aaPredicted RBP16.24■□□□□ 0.19
HDDC2-206ENST00000608461 COLQQ9Y215 455 aaPredicted RBP16.24■□□□□ 0.19
HDDC2-206ENST00000608461 B4GALT4O60513 344 aa16.23■□□□□ 0.19
HDDC2-206ENST00000608461 LGALS2P05162 132 aa16.23■□□□□ 0.19
HDDC2-206ENST00000608461 PSEN2P49810 448 aa16.23■□□□□ 0.19
HDDC2-206ENST00000608461 TRIM29Q14134 588 aa16.23■□□□□ 0.19
HDDC2-206ENST00000608461 MFSD10Q14728 455 aa16.23■□□□□ 0.19
HDDC2-206ENST00000608461 NONOQ15233 471 aaKnown RBP eCLIP16.23■□□□□ 0.19
HDDC2-206ENST00000608461 KIAA0753Q2KHM9 967 aa16.23■□□□□ 0.19
HDDC2-206ENST00000608461 SH3RF1Q7Z6J0 888 aa16.23■□□□□ 0.19
HDDC2-206ENST00000608461 PLA2G4DQ86XP0 818 aa16.23■□□□□ 0.19
HDDC2-206ENST00000608461 C7orf31Q8N865 590 aa16.23■□□□□ 0.19
HDDC2-206ENST00000608461 RASGRP4Q8TDF6 673 aa16.23■□□□□ 0.19
HDDC2-206ENST00000608461 TBCKQ8TEA7 893 aa16.23■□□□□ 0.19
HDDC2-206ENST00000608461 NAP1L4Q99733 375 aaKnown RBP16.23■□□□□ 0.19
HDDC2-206ENST00000608461 SLC9A2Q9UBY0 812 aa16.23■□□□□ 0.19
HDDC2-206ENST00000608461 LTBP2Q14767 1821 aa16.23■□□□□ 0.19
HDDC2-206ENST00000608461 CYP3A7-CYP3A51PA0A087WV96 503 aa16.22■□□□□ 0.19
HDDC2-206ENST00000608461 CCDC194A0A1B0GVG4 234 aa16.22■□□□□ 0.19
HDDC2-206ENST00000608461 IPO5O00410 1097 aaKnown RBP16.22■□□□□ 0.19
HDDC2-206ENST00000608461 ADAMTS3O15072 1205 aa16.22■□□□□ 0.19
HDDC2-206ENST00000608461 ARP10275 920 aa16.22■□□□□ 0.19
HDDC2-206ENST00000608461 CYP3A7P24462 503 aa16.22■□□□□ 0.19
HDDC2-206ENST00000608461 FAM47CQ5HY64 1035 aa16.22■□□□□ 0.19
HDDC2-206ENST00000608461 MFSD5Q6N075 450 aa16.22■□□□□ 0.19
HDDC2-206ENST00000608461 CCDC83Q8IWF9 413 aa16.22■□□□□ 0.19
HDDC2-206ENST00000608461 TNPO1Q92973 898 aaKnown RBP16.22■□□□□ 0.19
HDDC2-206ENST00000608461 BCAS3Q9H6U6 928 aa16.22■□□□□ 0.19
HDDC2-206ENST00000608461 GTF2IRD1Q9UHL9 959 aa16.22■□□□□ 0.19
HDDC2-206ENST00000608461 KCNJ14Q9UNX9 436 aa16.22■□□□□ 0.19
HDDC2-206ENST00000608461 DOCK5Q9H7D0 1870 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 PITPNM1O00562 1244 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 ATG7O95352 703 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 MMP1P03956 469 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 ZNF286BP0CG31 522 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 GNAT1P11488 350 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 KRT2P35908 639 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 TCF7P36402 384 aaPredicted RBP16.21■□□□□ 0.19
HDDC2-206ENST00000608461 ST3GAL1Q11201 340 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 Q4G0T1 1027 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 TMEM199Q8N511 208 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 BADQ92934 168 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 ZNF577Q9BSK1 485 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 UBE2OQ9C0C9 1292 aaKnown RBP16.21■□□□□ 0.19
HDDC2-206ENST00000608461 TRPV6Q9H1D0 765 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 HIPK3Q9H422 1215 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 SMARCAD1Q9H4L7 1026 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 ERAP1Q9NZ08 941 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 NOD1Q9Y239 953 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 KIF3AQ9Y496 699 aa16.21■□□□□ 0.19
HDDC2-206ENST00000608461 EMSYQ7Z589 1322 aa16.2■□□□□ 0.18
HDDC2-206ENST00000608461 GSTTP1A0A1W2PQM5 241 aa16.2■□□□□ 0.18
HDDC2-206ENST00000608461 SORBS3O60504 671 aa16.2■□□□□ 0.18
HDDC2-206ENST00000608461 JAK2O60674 1132 aa16.2■□□□□ 0.18
HDDC2-206ENST00000608461 GCFC2P16383 781 aaKnown RBP16.2■□□□□ 0.18
HDDC2-206ENST00000608461 SLC26A2P50443 739 aa16.2■□□□□ 0.18
HDDC2-206ENST00000608461 MDM2Q00987 491 aaPredicted RBP16.2■□□□□ 0.18
HDDC2-206ENST00000608461 ITGB3BPQ13352 177 aaPredicted RBP16.2■□□□□ 0.18
HDDC2-206ENST00000608461 PTGISQ16647 500 aa16.2■□□□□ 0.18
HDDC2-206ENST00000608461 PRR16Q569H4 304 aa16.2■□□□□ 0.18
HDDC2-206ENST00000608461 PPP4R3AQ6IN85 833 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms