RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 FKBP15Q5T1M5 1219 aa17.65■□□□□ 0.42
CTSA-214ENST00000606788 CIAPIN1Q6FI81 312 aa17.65■□□□□ 0.42
CTSA-214ENST00000606788 ANKRD13CQ8N6S4 541 aa17.65■□□□□ 0.42
CTSA-214ENST00000606788 HINFPQ9BQA5 517 aa17.65■□□□□ 0.42
CTSA-214ENST00000606788 NDST4Q9H3R1 872 aa17.65■□□□□ 0.42
CTSA-214ENST00000606788 QSER1Q2KHR3 1735 aa17.65■□□□□ 0.42
CTSA-214ENST00000606788 ATRNL1Q5VV63 1379 aa17.64■□□□□ 0.42
CTSA-214ENST00000606788 PHLPP2Q6ZVD8 1323 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 MACROD2A1Z1Q3 448 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 NDUFA10O95299 355 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 SPATA31C1P0DKV0 1188 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 ALAS1P13196 640 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 USP11P51784 963 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 SFR1Q86XK3 245 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 TMTC1Q8IUR5 882 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 HDAC6Q9UBN7 1215 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 NFIBO00712 420 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 CLIC2O15247 247 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 ARP10275 920 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 CAP2P40123 477 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 LDHDQ86WU2 507 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 REEP2Q9BRK0 252 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 RUSC1Q9BVN2 902 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 TAOK3Q9H2K8 898 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 RAVER2Q9HCJ3 691 aaKnown RBP17.64■□□□□ 0.41
CTSA-214ENST00000606788 ITIH6Q6UXX5 1313 aa17.64■□□□□ 0.41
CTSA-214ENST00000606788 PPP2R3AQ06190 1150 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 SPIRE1Q08AE8 756 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 R3HDM1Q15032 1099 aaKnown RBP17.63■□□□□ 0.41
CTSA-214ENST00000606788 RRAGAQ7L523 313 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 VCPKMTQ9H867 229 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 RCCD1A6NED2 376 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 SEC31AO94979 1220 aaKnown RBP17.63■□□□□ 0.41
CTSA-214ENST00000606788 MYBP10242 640 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 DALRD3Q5D0E6 543 aaKnown RBP17.63■□□□□ 0.41
CTSA-214ENST00000606788 KIAA1328Q86T90 577 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 DYDC2Q96IM9 177 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 CCPG1Q9ULG6 757 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 DNM3Q9UQ16 869 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 TNS1Q9HBL0 1735 aaKnown RBP17.63■□□□□ 0.41
CTSA-214ENST00000606788 PVALEFA0A1B0GWK0 134 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 GCOM1H8Y6P7 765 aaPredicted RBP17.63■□□□□ 0.41
CTSA-214ENST00000606788 POLR2MP0CAP2 368 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 SREBF1P36956 1147 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 AP3B2Q13367 1082 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 VWA3BQ502W6 1294 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 PSMD1Q99460 953 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 EIF2AK1Q9BQI3 630 aaKnown RBP17.63■□□□□ 0.41
CTSA-214ENST00000606788 EMILIN3Q9NT22 766 aa17.63■□□□□ 0.41
CTSA-214ENST00000606788 SRGAP2O75044 1071 aa17.62■□□□□ 0.41
CTSA-214ENST00000606788 LRCH2Q5VUJ6 765 aa17.62■□□□□ 0.41
CTSA-214ENST00000606788 DNAAF5Q86Y56 855 aa17.62■□□□□ 0.41
CTSA-214ENST00000606788 CCDC65Q8IXS2 484 aa17.62■□□□□ 0.41
CTSA-214ENST00000606788 GUF1Q8N442 669 aaKnown RBP17.62■□□□□ 0.41
CTSA-214ENST00000606788 IL31RAQ8NI17 732 aa17.62■□□□□ 0.41
CTSA-214ENST00000606788 SCFD1Q8WVM8 642 aa17.62■□□□□ 0.41
CTSA-214ENST00000606788 PSMB7Q99436 277 aa17.62■□□□□ 0.41
CTSA-214ENST00000606788 TSG101Q99816 390 aa17.62■□□□□ 0.41
CTSA-214ENST00000606788 LACRTQ9GZZ8 138 aa17.62■□□□□ 0.41
CTSA-214ENST00000606788 NT5C3AQ9H0P0 336 aa17.62■□□□□ 0.41
CTSA-214ENST00000606788 DNA2P51530 1060 aa17.62■□□□□ 0.41
CTSA-214ENST00000606788 FAM114A1Q8IWE2 563 aa17.62■□□□□ 0.41
CTSA-214ENST00000606788 SLFN12Q8IYM2 578 aa17.62■□□□□ 0.41
CTSA-214ENST00000606788 BANK1Q8NDB2 785 aa17.62■□□□□ 0.41
CTSA-214ENST00000606788 HOOK2Q96ED9 719 aa17.62■□□□□ 0.41
CTSA-214ENST00000606788 CCDC122Q5T0U0 273 aa17.61■□□□□ 0.41
CTSA-214ENST00000606788 NBPF12Q5TAG4 269 aaPredicted RBP17.61■□□□□ 0.41
CTSA-214ENST00000606788 TCERG1LQ5VWI1 586 aa17.61■□□□□ 0.41
CTSA-214ENST00000606788 LRRC55Q6ZSA7 311 aa17.61■□□□□ 0.41
CTSA-214ENST00000606788 MICALL2Q8IY33 904 aa17.61■□□□□ 0.41
CTSA-214ENST00000606788 ZKSCAN4Q969J2 545 aaPredicted RBP17.61■□□□□ 0.41
CTSA-214ENST00000606788 CAPZA3Q96KX2 299 aa17.61■□□□□ 0.41
CTSA-214ENST00000606788 CCDC94Q9BW85 323 aaPredicted RBP17.61■□□□□ 0.41
CTSA-214ENST00000606788 CAPN11Q9UMQ6 739 aa17.61■□□□□ 0.41
CTSA-214ENST00000606788 TMEM150BA6NC51 233 aa17.61■□□□□ 0.41
CTSA-214ENST00000606788 NFKBIEO00221 500 aa17.61■□□□□ 0.41
CTSA-214ENST00000606788 ARHGAP25P42331 645 aa17.61■□□□□ 0.41
CTSA-214ENST00000606788 ORC2Q13416 577 aaPredicted RBP17.61■□□□□ 0.41
CTSA-214ENST00000606788 ZC2HC1CQ53FD0 456 aaPredicted RBP17.61■□□□□ 0.41
CTSA-214ENST00000606788 MAP7D2Q96T17 732 aa17.61■□□□□ 0.41
CTSA-214ENST00000606788 NAA15Q9BXJ9 866 aaKnown RBP17.61■□□□□ 0.41
CTSA-214ENST00000606788 NHEJ1Q9H9Q4 299 aaPredicted RBP17.61■□□□□ 0.41
CTSA-214ENST00000606788 PEX10O60683 326 aa17.61■□□□□ 0.41
CTSA-214ENST00000606788 SLC12A3P55017 1021 aa17.61■□□□□ 0.41
CTSA-214ENST00000606788 HERVK_113P62684 666 aa17.61■□□□□ 0.41
CTSA-214ENST00000606788 DCAF17Q5H9S7 520 aaPredicted RBP17.61■□□□□ 0.41
CTSA-214ENST00000606788 HAUS3Q68CZ6 603 aa17.61■□□□□ 0.41
CTSA-214ENST00000606788 WNK4Q96J92 1243 aa17.61■□□□□ 0.41
CTSA-214ENST00000606788 ZNHIT6Q9NWK9 470 aaKnown RBP17.61■□□□□ 0.41
CTSA-214ENST00000606788 KDM3AQ9Y4C1 1321 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 GAS7O60861 476 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 FLOT1O75955 427 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 GCNT3O95395 438 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 GMPSP49915 693 aaPredicted RBP17.6■□□□□ 0.41
CTSA-214ENST00000606788 SP4Q02446 784 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 ADAM9Q13443 819 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 MTMR2Q13614 643 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 CACNA2D4Q7Z3S7 1137 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 CRYGNQ8WXF5 182 aa17.6■□□□□ 0.41
CTSA-214ENST00000606788 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms