RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 PPP1R14CQ8TAE6 165 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 SUN5Q8TC36 379 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 NUDT16Q96DE0 195 aaKnown RBP5.21□□□□□ -1.58
LINC01109-201ENST00000603837 BARD1Q99728 777 aaKnown RBP5.21□□□□□ -1.58
LINC01109-201ENST00000603837 ZFAND3Q9H8U3 227 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 MKL2Q9ULH7 1088 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 CORO1CQ9ULV4 474 aaPredicted RBP5.21□□□□□ -1.58
LINC01109-201ENST00000603837 PCDHB11Q9Y5F2 797 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 SLC4A7Q9Y6M7 1214 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 ADGRB3O60242 1522 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 ADGRB2O60241 1585 aa5.21□□□□□ -1.58
LINC01109-201ENST00000603837 RASSF10A6NK89 507 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 ZSCAN12O43309 604 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 ST13P50502 369 aaKnown RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 ETF1P62495 437 aaKnown RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 TYRO3Q06418 890 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 DCTN1Q14203 1278 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 LBRQ14739 615 aaKnown RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 CCNG2Q16589 344 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 KBTBD12Q3ZCT8 623 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 VPS53Q5VIR6 699 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 POMZP3Q6PJE2 187 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 B4GALNT4Q76KP1 1039 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 CEP68Q76N32 757 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 BZW1Q7L1Q6 419 aaKnown RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 RSRC2Q7L4I2 434 aaKnown RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 DAAM2Q86T65 1068 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 DEPDC4Q8N2C3 294 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 ARHGAP45Q92619 1136 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 ZCWPW1Q9H0M4 648 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 ATP8A1Q9Y2Q0 1164 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 WDR33Q9C0J8 1336 aaKnown RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 SLIT1O75093 1534 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 TRIM75PA6NK02 468 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 PDLIM1O00151 329 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 RASSF9O75901 435 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 ATF7P17544 494 aaPredicted RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 DESP17661 470 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 RPL17P18621 184 aaKnown RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 RPL13P26373 211 aaKnown RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 NOS2P35228 1153 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 POLD2P49005 469 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 MRPS35P82673 323 aaKnown RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 ADCY1Q08828 1119 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 GNPTABQ3T906 1256 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 TRAF7Q6Q0C0 670 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 BRAPQ7Z569 592 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 CCDC170Q8IYT3 715 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 PHTF2Q8N3S3 785 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 ZNF784Q8NCA9 323 aaPredicted RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 CCDC150Q8NCX0 1101 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 ZFAND2BQ8WV99 257 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 RSAD2Q8WXG1 361 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 KCNN1Q92952 543 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 TNMDQ9H2S6 317 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 NEUROD4Q9HD90 331 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 SLC40A1Q9NP59 571 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 VTI1BQ9UEU0 232 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 TCHHQ07283 1943 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 ANKRD26Q9UPS8 1709 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 ERVK-7P63135 1459 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 GOLGA6L9A6NEM1 432 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 FAM25EA8MYX2 175 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 AKR1B15C9JRZ8 316 aaPredicted RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 PIK3CDO00329 1044 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 ST8SIA5O15466 376 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 CYP27B1O15528 508 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 AKAP10O43572 662 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 MBD4O95243 580 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 ALAS1P13196 640 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 TXLNAP40222 546 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 CASP2P42575 452 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 PPP2R3AQ06190 1150 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 PUM3Q15397 648 aaKnown RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 GPR162Q16538 588 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 MAP3K11Q16584 847 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 IMMTQ16891 758 aaKnown RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 MUM1Q2TAK8 710 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 ANO6Q4KMQ2 910 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 RBM20Q5T481 1227 aaKnown RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 E4F1Q66K89 784 aaPredicted RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 XRRA1Q6P2D8 792 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 EEPD1Q7L9B9 569 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 CHD1LQ86WJ1 897 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 SLC44A2Q8IWA5 706 aaPredicted RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 LRRC43Q8N309 656 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 ATP11CQ8NB49 1132 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 BCAS4Q8TDM0 211 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 HNRNPLLQ8WVV9 542 aaKnown RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 TRMT2BQ96GJ1 504 aaKnown RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 GBP3Q9H0R5 595 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 VCPKMTQ9H867 229 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 MYO1AQ9UBC5 1043 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 GTF2A1LQ9UNN4 478 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 WDR37Q9Y2I8 494 aa5.2□□□□□ -1.58
LINC01109-201ENST00000603837 CLTCQ00610 1675 aaKnown RBP5.2□□□□□ -1.58
LINC01109-201ENST00000603837 A0A1B0GVG6 124 aa5.19□□□□□ -1.58
LINC01109-201ENST00000603837 MEFVO15553 781 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms