RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 MYH9P35579 1960 aaKnown RBP14.58□□□□□ -0.07
USE1-209ENST00000601592 TRIM43BA6NCK2 446 aa14.58□□□□□ -0.08
USE1-209ENST00000601592 B4GALT4O60513 344 aa14.58□□□□□ -0.08
USE1-209ENST00000601592 ARP10275 920 aa14.58□□□□□ -0.08
USE1-209ENST00000601592 RAG1P15918 1043 aa14.58□□□□□ -0.08
USE1-209ENST00000601592 KCNA2P16389 499 aa14.58□□□□□ -0.08
USE1-209ENST00000601592 ST3GAL1Q11201 340 aa14.58□□□□□ -0.08
USE1-209ENST00000601592 TRIM29Q14134 588 aa14.58□□□□□ -0.08
USE1-209ENST00000601592 UTP14CQ5TAP6 766 aaKnown RBP14.58□□□□□ -0.08
USE1-209ENST00000601592 GALNT17Q6IS24 598 aa14.58□□□□□ -0.08
USE1-209ENST00000601592 PLA2G4DQ86XP0 818 aa14.58□□□□□ -0.08
USE1-209ENST00000601592 TRIM43Q96BQ3 446 aaPredicted RBP14.58□□□□□ -0.08
USE1-209ENST00000601592 UIMC1Q96RL1 719 aa14.58□□□□□ -0.08
USE1-209ENST00000601592 SENP7Q9BQF6 1050 aa14.58□□□□□ -0.08
USE1-209ENST00000601592 KATNAL1Q9BW62 490 aa14.58□□□□□ -0.08
USE1-209ENST00000601592 TRPV6Q9H1D0 765 aa14.58□□□□□ -0.08
USE1-209ENST00000601592 SH2B1Q9NRF2 756 aaPredicted RBP14.58□□□□□ -0.08
USE1-209ENST00000601592 KCNH7Q9NS40 1196 aa14.58□□□□□ -0.08
USE1-209ENST00000601592 COLQQ9Y215 455 aaPredicted RBP14.58□□□□□ -0.08
USE1-209ENST00000601592 WDR81Q562E7 1941 aa14.58□□□□□ -0.08
USE1-209ENST00000601592 FAM86B1E9PN63 330 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 DDX39AO00148 427 aaKnown RBP14.57□□□□□ -0.08
USE1-209ENST00000601592 PPFIA4O75335 1185 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 LGALS2P05162 132 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 FAM86B2P0C5J1 330 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 FDPSP14324 419 aaKnown RBP14.57□□□□□ -0.08
USE1-209ENST00000601592 PSEN2P49810 448 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 MFSD10Q14728 455 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 FAM177A1Q8N128 213 aaPredicted RBP14.57□□□□□ -0.08
USE1-209ENST00000601592 SLC43A3Q8NBI5 491 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 DAGLBQ8NCG7 672 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 TBCKQ8TEA7 893 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 BADQ92934 168 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 GPR20Q99678 358 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 SDF4Q9BRK5 362 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 PHF20Q9BVI0 1012 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 SEZ6LQ9BYH1 1024 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 PPP1R12CQ9BZL4 782 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 UBE2OQ9C0C9 1292 aaKnown RBP14.57□□□□□ -0.08
USE1-209ENST00000601592 BRMS1Q9HCU9 246 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 TRMT13Q9NUP7 481 aaKnown RBP14.57□□□□□ -0.08
USE1-209ENST00000601592 NOD1Q9Y239 953 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 TELO2Q9Y4R8 837 aa14.57□□□□□ -0.08
USE1-209ENST00000601592 CCDC194A0A1B0GVG4 234 aa14.56□□□□□ -0.08
USE1-209ENST00000601592 MEIS1O00470 390 aa14.56□□□□□ -0.08
USE1-209ENST00000601592 MAFGO15525 162 aa14.56□□□□□ -0.08
USE1-209ENST00000601592 F2P00734 622 aa14.56□□□□□ -0.08
USE1-209ENST00000601592 CYP3A4P08684 503 aa14.56□□□□□ -0.08
USE1-209ENST00000601592 SETQ01105 290 aaPredicted RBP14.56□□□□□ -0.08
USE1-209ENST00000601592 NPY5RQ15761 445 aa14.56□□□□□ -0.08
USE1-209ENST00000601592 KIAA0753Q2KHM9 967 aa14.56□□□□□ -0.08
USE1-209ENST00000601592 PRR16Q569H4 304 aa14.56□□□□□ -0.08
USE1-209ENST00000601592 NFRKBQ6P4R8 1299 aa14.56□□□□□ -0.08
USE1-209ENST00000601592 NIPA1Q7RTP0 329 aa14.56□□□□□ -0.08
USE1-209ENST00000601592 KRT25Q7Z3Z0 450 aa14.56□□□□□ -0.08
USE1-209ENST00000601592 TRIM50Q86XT4 487 aa14.56□□□□□ -0.08
USE1-209ENST00000601592 C7orf31Q8N865 590 aa14.56□□□□□ -0.08
USE1-209ENST00000601592 KAT2BQ92831 832 aa14.56□□□□□ -0.08
USE1-209ENST00000601592 AGO4Q9HCK5 861 aaKnown RBP14.56□□□□□ -0.08
USE1-209ENST00000601592 JPH1Q9HDC5 661 aaPredicted RBP14.56□□□□□ -0.08
USE1-209ENST00000601592 TRIOBPQ9H2D6 2365 aa14.56□□□□□ -0.08
USE1-209ENST00000601592 TANC1Q9C0D5 1861 aa14.55□□□□□ -0.08
USE1-209ENST00000601592 KIAA0355O15063 1070 aa14.55□□□□□ -0.08
USE1-209ENST00000601592 CD4P01730 458 aa14.55□□□□□ -0.08
USE1-209ENST00000601592 HOXD8P13378 290 aaPredicted RBP14.55□□□□□ -0.08
USE1-209ENST00000601592 KRT2P35908 639 aa14.55□□□□□ -0.08
USE1-209ENST00000601592 TCF7P36402 384 aaPredicted RBP14.55□□□□□ -0.08
USE1-209ENST00000601592 GUCY1B3Q02153 619 aa14.55□□□□□ -0.08
USE1-209ENST00000601592 NONOQ15233 471 aaKnown RBP eCLIP14.55□□□□□ -0.08
USE1-209ENST00000601592 FAM184AQ8NB25 1140 aa14.55□□□□□ -0.08
USE1-209ENST00000601592 OXER1Q8TDS5 423 aa14.55□□□□□ -0.08
USE1-209ENST00000601592 CRYGNQ8WXF5 182 aa14.55□□□□□ -0.08
USE1-209ENST00000601592 GDF15Q99988 308 aa14.55□□□□□ -0.08
USE1-209ENST00000601592 LLPHQ9BRT6 129 aaKnown RBP14.55□□□□□ -0.08
USE1-209ENST00000601592 ZNF577Q9BSK1 485 aa14.55□□□□□ -0.08
USE1-209ENST00000601592 HIPK3Q9H422 1215 aa14.55□□□□□ -0.08
USE1-209ENST00000601592 HDAC6Q9UBN7 1215 aa14.55□□□□□ -0.08
USE1-209ENST00000601592 SLC9A2Q9UBY0 812 aa14.55□□□□□ -0.08
USE1-209ENST00000601592 TCEAL9Q9UHQ7 104 aa14.55□□□□□ -0.08
USE1-209ENST00000601592 TBX21Q9UL17 535 aa14.55□□□□□ -0.08
USE1-209ENST00000601592 ZNF215Q9UL58 517 aaPredicted RBP14.55□□□□□ -0.08
USE1-209ENST00000601592 SCN5AQ14524 2016 aa14.54□□□□□ -0.08
USE1-209ENST00000601592 IGLV3-22A0A075B6J6 115 aa14.54□□□□□ -0.08
USE1-209ENST00000601592 H3BRB1 525 aa14.54□□□□□ -0.08
USE1-209ENST00000601592 M0R2N6 131 aa14.54□□□□□ -0.08
USE1-209ENST00000601592 IPO5O00410 1097 aaKnown RBP14.54□□□□□ -0.08
USE1-209ENST00000601592 CD2BP2O95400 341 aaKnown RBP14.54□□□□□ -0.08
USE1-209ENST00000601592 SUPT20HL2P0C7V6 817 aa14.54□□□□□ -0.08
USE1-209ENST00000601592 CYP2C9P11712 490 aa14.54□□□□□ -0.08
USE1-209ENST00000601592 ITGB8P26012 769 aa14.54□□□□□ -0.08
USE1-209ENST00000601592 HMGN5P82970 282 aaKnown RBP14.54□□□□□ -0.08
USE1-209ENST00000601592 PTPN11Q06124 597 aaPredicted RBP14.54□□□□□ -0.08
USE1-209ENST00000601592 ITGB3BPQ13352 177 aaPredicted RBP14.54□□□□□ -0.08
USE1-209ENST00000601592 PTGISQ16647 500 aa14.54□□□□□ -0.08
USE1-209ENST00000601592 INF2Q27J81 1249 aa14.54□□□□□ -0.08
USE1-209ENST00000601592 GDF6Q6KF10 455 aaPredicted RBP14.54□□□□□ -0.08
USE1-209ENST00000601592 PIK3AP1Q6ZUJ8 805 aa14.54□□□□□ -0.08
USE1-209ENST00000601592 SEPT1Q8WYJ6 367 aa14.54□□□□□ -0.08
USE1-209ENST00000601592 GLG1Q92896 1179 aa14.54□□□□□ -0.08
USE1-209ENST00000601592 C16orf70Q9BSU1 422 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms