RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 USP17L6PQ6QN14 398 aa19.59■□□□□ 0.73
SCAF1-204ENST00000601038 SRBD1Q8N5C6 995 aaKnown RBP19.59■□□□□ 0.73
SCAF1-204ENST00000601038 TSPYL2Q9H2G4 693 aaPredicted RBP19.59■□□□□ 0.73
SCAF1-204ENST00000601038 C17orf102A2RUQ5 167 aa19.58■□□□□ 0.72
SCAF1-204ENST00000601038 EPOPA6NHQ4 379 aa19.58■□□□□ 0.72
SCAF1-204ENST00000601038 GTPBP6O43824 516 aaPredicted RBP19.58■□□□□ 0.72
SCAF1-204ENST00000601038 MBTPS1Q14703 1052 aa19.58■□□□□ 0.72
SCAF1-204ENST00000601038 TCTN1Q2MV58 587 aa19.58■□□□□ 0.72
SCAF1-204ENST00000601038 CYFIP1Q7L576 1253 aa19.58■□□□□ 0.72
SCAF1-204ENST00000601038 MICALL1Q8N3F8 863 aa19.58■□□□□ 0.72
SCAF1-204ENST00000601038 ARNTL2Q8WYA1 636 aa19.58■□□□□ 0.72
SCAF1-204ENST00000601038 ATP6V0A1Q93050 837 aa19.58■□□□□ 0.72
SCAF1-204ENST00000601038 GPR20Q99678 358 aa19.58■□□□□ 0.72
SCAF1-204ENST00000601038 SENP7Q9BQF6 1050 aa19.58■□□□□ 0.72
SCAF1-204ENST00000601038 ZBED2Q9BTP6 218 aa19.58■□□□□ 0.72
SCAF1-204ENST00000601038 MTCH2Q9Y6C9 303 aa19.58■□□□□ 0.72
SCAF1-204ENST00000601038 VCANP13611 3396 aa19.58■□□□□ 0.72
SCAF1-204ENST00000601038 EMSYQ7Z589 1322 aa19.57■□□□□ 0.72
SCAF1-204ENST00000601038 PLEKHA8P1O95397 391 aa19.57■□□□□ 0.72
SCAF1-204ENST00000601038 SMIM10L2AP0DMW4 78 aa19.57■□□□□ 0.72
SCAF1-204ENST00000601038 SMIM10L2BP0DMW5 78 aa19.57■□□□□ 0.72
SCAF1-204ENST00000601038 THPOP40225 353 aa19.57■□□□□ 0.72
SCAF1-204ENST00000601038 DEFB103AP81534 67 aa19.57■□□□□ 0.72
SCAF1-204ENST00000601038 CREB3L3Q68CJ9 461 aa19.57■□□□□ 0.72
SCAF1-204ENST00000601038 RNPEPQ9H4A4 650 aa19.57■□□□□ 0.72
SCAF1-204ENST00000601038 PSTPIP2Q9H939 334 aa19.57■□□□□ 0.72
SCAF1-204ENST00000601038 SLC12A7Q9Y666 1083 aa19.57■□□□□ 0.72
SCAF1-204ENST00000601038 RSPH10B2B2RC85 870 aa19.56■□□□□ 0.72
SCAF1-204ENST00000601038 LGR5O75473 907 aa19.56■□□□□ 0.72
SCAF1-204ENST00000601038 GJB5O95377 273 aa19.56■□□□□ 0.72
SCAF1-204ENST00000601038 RSPH10BP0C881 870 aa19.56■□□□□ 0.72
SCAF1-204ENST00000601038 COL9A3Q14050 684 aaPredicted RBP19.56■□□□□ 0.72
SCAF1-204ENST00000601038 TMCO2Q7Z6W1 182 aaPredicted RBP19.56■□□□□ 0.72
SCAF1-204ENST00000601038 NLRX1Q86UT6 975 aa19.56■□□□□ 0.72
SCAF1-204ENST00000601038 CMTR1Q8N1G2 835 aaKnown RBP19.56■□□□□ 0.72
SCAF1-204ENST00000601038 RAD9AQ99638 391 aa19.56■□□□□ 0.72
SCAF1-204ENST00000601038 ANO2Q9NQ90 1003 aa19.56■□□□□ 0.72
SCAF1-204ENST00000601038 CHD7Q9P2D1 2997 aa19.56■□□□□ 0.72
SCAF1-204ENST00000601038 PTPRSQ13332 1948 aa19.56■□□□□ 0.72
SCAF1-204ENST00000601038 PRRC2BQ5JSZ5 2229 aaKnown RBP19.56■□□□□ 0.72
SCAF1-204ENST00000601038 TNFRSF10AO00220 468 aa19.55■□□□□ 0.72
SCAF1-204ENST00000601038 TREHO43280 583 aa19.55■□□□□ 0.72
SCAF1-204ENST00000601038 GNAT1P11488 350 aa19.55■□□□□ 0.72
SCAF1-204ENST00000601038 RXRAP19793 462 aa19.55■□□□□ 0.72
SCAF1-204ENST00000601038 FANCBQ8NB91 859 aa19.55■□□□□ 0.72
SCAF1-204ENST00000601038 GIMAP8Q8ND71 665 aaPredicted RBP19.55■□□□□ 0.72
SCAF1-204ENST00000601038 LCHNA4D1U4 455 aa19.54■□□□□ 0.72
SCAF1-204ENST00000601038 CAND2O75155 1236 aa19.54■□□□□ 0.72
SCAF1-204ENST00000601038 BMP2KLQ5H9B9 411 aa19.54■□□□□ 0.72
SCAF1-204ENST00000601038 SGMS1Q86VZ5 419 aa19.54■□□□□ 0.72
SCAF1-204ENST00000601038 DBF4BQ8NFT6 615 aa19.54■□□□□ 0.72
SCAF1-204ENST00000601038 GPRASP2Q96D09 838 aa19.54■□□□□ 0.72
SCAF1-204ENST00000601038 ZNF215Q9UL58 517 aaPredicted RBP19.54■□□□□ 0.72
SCAF1-204ENST00000601038 TTC28Q96AY4 2481 aa19.54■□□□□ 0.72
SCAF1-204ENST00000601038 GRB10Q13322 594 aa19.53■□□□□ 0.72
SCAF1-204ENST00000601038 MKRN4PQ13434 485 aaPredicted RBP19.53■□□□□ 0.72
SCAF1-204ENST00000601038 SKIV2LQ15477 1246 aaKnown RBP19.53■□□□□ 0.72
SCAF1-204ENST00000601038 AAK1Q2M2I8 961 aa19.53■□□□□ 0.72
SCAF1-204ENST00000601038 PLEKHG4Q58EX7 1191 aa19.53■□□□□ 0.72
SCAF1-204ENST00000601038 RNF20Q5VTR2 975 aa19.53■□□□□ 0.72
SCAF1-204ENST00000601038 KRT40Q6A162 431 aa19.53■□□□□ 0.72
SCAF1-204ENST00000601038 TMTC3Q6ZXV5 915 aa19.53■□□□□ 0.72
SCAF1-204ENST00000601038 SPRED2Q7Z698 418 aa19.53■□□□□ 0.72
SCAF1-204ENST00000601038 IL27Q8NEV9 243 aa19.53■□□□□ 0.72
SCAF1-204ENST00000601038 ADAMTS19Q8TE59 1207 aa19.53■□□□□ 0.72
SCAF1-204ENST00000601038 CDHR1Q96JP9 859 aa19.53■□□□□ 0.72
SCAF1-204ENST00000601038 LRRC2Q9BYS8 371 aa19.53■□□□□ 0.72
SCAF1-204ENST00000601038 SETD4Q9NVD3 440 aa19.53■□□□□ 0.72
SCAF1-204ENST00000601038 TELO2Q9Y4R8 837 aa19.53■□□□□ 0.72
SCAF1-204ENST00000601038 LPXNO60711 386 aa19.52■□□□□ 0.72
SCAF1-204ENST00000601038 ADAM17P78536 824 aa19.52■□□□□ 0.72
SCAF1-204ENST00000601038 UTP14CQ5TAP6 766 aaKnown RBP19.52■□□□□ 0.72
SCAF1-204ENST00000601038 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.52■□□□□ 0.72
SCAF1-204ENST00000601038 TRIM50Q86XT4 487 aa19.52■□□□□ 0.72
SCAF1-204ENST00000601038 RAB11FIP4Q86YS3 637 aa19.52■□□□□ 0.72
SCAF1-204ENST00000601038 CCDC82Q8N4S0 544 aa19.52■□□□□ 0.72
SCAF1-204ENST00000601038 DOCK5Q9H7D0 1870 aa19.52■□□□□ 0.71
SCAF1-204ENST00000601038 hCG_1642624A0A1W2PR95 340 aa19.51■□□□□ 0.71
SCAF1-204ENST00000601038 ATP9AO75110 1047 aa19.51■□□□□ 0.71
SCAF1-204ENST00000601038 AMHP03971 560 aa19.51■□□□□ 0.71
SCAF1-204ENST00000601038 ITGB5P18084 799 aa19.51■□□□□ 0.71
SCAF1-204ENST00000601038 ERVK-21P61565 698 aa19.51■□□□□ 0.71
SCAF1-204ENST00000601038 SP4Q02446 784 aa19.51■□□□□ 0.71
SCAF1-204ENST00000601038 SYNE3Q6ZMZ3 975 aa19.51■□□□□ 0.71
SCAF1-204ENST00000601038 MICU3Q86XE3 530 aa19.51■□□□□ 0.71
SCAF1-204ENST00000601038 SEPT8Q92599 483 aa19.51■□□□□ 0.71
SCAF1-204ENST00000601038 TGS1Q96RS0 853 aaKnown RBP19.51■□□□□ 0.71
SCAF1-204ENST00000601038 LMCD1Q9NZU5 365 aa19.51■□□□□ 0.71
SCAF1-204ENST00000601038 INSL6Q9Y581 213 aa19.51■□□□□ 0.71
SCAF1-204ENST00000601038 UBIAD1Q9Y5Z9 338 aa19.51■□□□□ 0.71
SCAF1-204ENST00000601038 NRCAMQ92823 1304 aa19.51■□□□□ 0.71
SCAF1-204ENST00000601038 LINC01553A4QN01 128 aa19.5■□□□□ 0.71
SCAF1-204ENST00000601038 SPDYE3A6NKU9 549 aa19.5■□□□□ 0.71
SCAF1-204ENST00000601038 MAFGO15525 162 aa19.5■□□□□ 0.71
SCAF1-204ENST00000601038 BMP1P13497 986 aa19.5■□□□□ 0.71
SCAF1-204ENST00000601038 KCNA2P16389 499 aa19.5■□□□□ 0.71
SCAF1-204ENST00000601038 TCF7P36402 384 aaPredicted RBP19.5■□□□□ 0.71
SCAF1-204ENST00000601038 TFF2Q03403 129 aa19.5■□□□□ 0.71
SCAF1-204ENST00000601038 FAM117BQ6P1L5 589 aa19.5■□□□□ 0.71
SCAF1-204ENST00000601038 LMBR1Q8WVP7 490 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms