RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 TMEM63BQ5T3F8 832 aa23.1■■□□□ 1.29
PNKP-215ENST00000600910 TRPV1Q8NER1 839 aa23.1■■□□□ 1.29
PNKP-215ENST00000600910 RIT2Q99578 217 aa23.1■■□□□ 1.29
PNKP-215ENST00000600910 SENP7Q9BQF6 1050 aa23.1■■□□□ 1.29
PNKP-215ENST00000600910 TBC1D22BQ9NU19 505 aa23.1■■□□□ 1.29
PNKP-215ENST00000600910 SRPRBQ9Y5M8 271 aaKnown RBP23.1■■□□□ 1.29
PNKP-215ENST00000600910 DDX39AO00148 427 aaKnown RBP23.09■■□□□ 1.29
PNKP-215ENST00000600910 DHX15O43143 795 aaKnown RBP23.09■■□□□ 1.29
PNKP-215ENST00000600910 PRKAR2AP13861 404 aaKnown RBP23.09■■□□□ 1.29
PNKP-215ENST00000600910 TECP42680 631 aa23.09■■□□□ 1.29
PNKP-215ENST00000600910 GRIN1Q05586 938 aa23.09■■□□□ 1.29
PNKP-215ENST00000600910 KRI1Q8N9T8 703 aaKnown RBP23.09■■□□□ 1.29
PNKP-215ENST00000600910 FERMT2Q96AC1 680 aa23.09■■□□□ 1.29
PNKP-215ENST00000600910 SDF4Q9BRK5 362 aa23.09■■□□□ 1.29
PNKP-215ENST00000600910 TEKT3Q9BXF9 490 aa23.09■■□□□ 1.29
PNKP-215ENST00000600910 BCAS3Q9H6U6 928 aa23.09■■□□□ 1.29
PNKP-215ENST00000600910 SORBS3O60504 671 aa23.08■■□□□ 1.29
PNKP-215ENST00000600910 TMEM266Q2M3C6 531 aa23.08■■□□□ 1.29
PNKP-215ENST00000600910 IQSEC1Q6DN90 963 aa23.08■■□□□ 1.29
PNKP-215ENST00000600910 VAV3Q9UKW4 847 aa23.08■■□□□ 1.29
PNKP-215ENST00000600910 PCDHA7Q9UN72 937 aa23.08■■□□□ 1.29
PNKP-215ENST00000600910 NFASCO94856 1347 aa23.08■■□□□ 1.29
PNKP-215ENST00000600910 ELP1O95163 1332 aa23.08■■□□□ 1.29
PNKP-215ENST00000600910 ADCY6O43306 1168 aa23.08■■□□□ 1.28
PNKP-215ENST00000600910 GGPS1O95749 300 aa23.08■■□□□ 1.28
PNKP-215ENST00000600910 INHAP05111 366 aa23.08■■□□□ 1.28
PNKP-215ENST00000600910 SMPD1P17405 629 aa23.08■■□□□ 1.28
PNKP-215ENST00000600910 FXR2P51116 673 aaKnown RBP eCLIP23.08■■□□□ 1.28
PNKP-215ENST00000600910 NEDD9Q14511 834 aa23.08■■□□□ 1.28
PNKP-215ENST00000600910 CSPP1Q1MSJ5 1256 aa23.08■■□□□ 1.28
PNKP-215ENST00000600910 MAP3K21Q5TCX8 1036 aa23.08■■□□□ 1.28
PNKP-215ENST00000600910 CYFIP1Q7L576 1253 aa23.08■■□□□ 1.28
PNKP-215ENST00000600910 GIMAP8Q8ND71 665 aaPredicted RBP23.08■■□□□ 1.28
PNKP-215ENST00000600910 COPS5Q92905 334 aa23.08■■□□□ 1.28
PNKP-215ENST00000600910 CLIC6Q96NY7 704 aa23.08■■□□□ 1.28
PNKP-215ENST00000600910 DOCK5Q9H7D0 1870 aa23.08■■□□□ 1.28
PNKP-215ENST00000600910 PTGS1P23219 599 aa23.07■■□□□ 1.28
PNKP-215ENST00000600910 TNFAIP2Q03169 654 aa23.07■■□□□ 1.28
PNKP-215ENST00000600910 SPIRE1Q08AE8 756 aa23.07■■□□□ 1.28
PNKP-215ENST00000600910 DUSP28Q4G0W2 176 aa23.07■■□□□ 1.28
PNKP-215ENST00000600910 GJC2Q5T442 439 aaPredicted RBP23.07■■□□□ 1.28
PNKP-215ENST00000600910 SH3TC2Q8TF17 1288 aa23.07■■□□□ 1.28
PNKP-215ENST00000600910 FAM184BQ9ULE4 1060 aa23.07■■□□□ 1.28
PNKP-215ENST00000600910 POTEMA6NI47 508 aa23.06■■□□□ 1.28
PNKP-215ENST00000600910 FARP2O94887 1054 aaPredicted RBP23.06■■□□□ 1.28
PNKP-215ENST00000600910 AKR1A1P14550 325 aa23.06■■□□□ 1.28
PNKP-215ENST00000600910 CNGA1P29973 690 aa23.06■■□□□ 1.28
PNKP-215ENST00000600910 CCND3P30281 292 aaPredicted RBP23.06■■□□□ 1.28
PNKP-215ENST00000600910 TMEM87AQ8NBN3 555 aa23.06■■□□□ 1.28
PNKP-215ENST00000600910 CSRNP2Q9H175 543 aa23.06■■□□□ 1.28
PNKP-215ENST00000600910 UNC45AQ9H3U1 944 aa23.06■■□□□ 1.28
PNKP-215ENST00000600910 MLXIPQ9HAP2 919 aa23.06■■□□□ 1.28
PNKP-215ENST00000600910 JPH1Q9HDC5 661 aaPredicted RBP23.06■■□□□ 1.28
PNKP-215ENST00000600910 CHMP2AO43633 222 aa23.05■■□□□ 1.28
PNKP-215ENST00000600910 CUTAO60888 179 aa23.05■■□□□ 1.28
PNKP-215ENST00000600910 PPP2R5CQ13362 524 aa23.05■■□□□ 1.28
PNKP-215ENST00000600910 CELF3Q5SZQ8 465 aaKnown RBP23.05■■□□□ 1.28
PNKP-215ENST00000600910 AXDND1Q5T1B0 1012 aaPredicted RBP23.05■■□□□ 1.28
PNKP-215ENST00000600910 METTL7BQ6UX53 244 aa23.05■■□□□ 1.28
PNKP-215ENST00000600910 B3GNT9Q6UX72 402 aa23.05■■□□□ 1.28
PNKP-215ENST00000600910 DHX37Q8IY37 1157 aaKnown RBP23.05■■□□□ 1.28
PNKP-215ENST00000600910 IGSF22Q8N9C0 903 aa23.05■■□□□ 1.28
PNKP-215ENST00000600910 RAB34Q9BZG1 259 aa23.05■■□□□ 1.28
PNKP-215ENST00000600910 SLC9A2Q9UBY0 812 aa23.05■■□□□ 1.28
PNKP-215ENST00000600910 TCEAL9Q9UHQ7 104 aa23.05■■□□□ 1.28
PNKP-215ENST00000600910 NKRFO15226 690 aaKnown RBP eCLIP23.04■■□□□ 1.28
PNKP-215ENST00000600910 LONP1P36776 959 aaKnown RBP23.04■■□□□ 1.28
PNKP-215ENST00000600910 SP4Q02446 784 aa23.04■■□□□ 1.28
PNKP-215ENST00000600910 PDIA5Q14554 519 aa23.04■■□□□ 1.28
PNKP-215ENST00000600910 SLC9C1Q4G0N8 1177 aa23.04■■□□□ 1.28
PNKP-215ENST00000600910 SPECC1Q5M775 1068 aa23.04■■□□□ 1.28
PNKP-215ENST00000600910 NCAPH2Q6IBW4 605 aa23.04■■□□□ 1.28
PNKP-215ENST00000600910 LENG1Q96BZ8 264 aaPredicted RBP23.04■■□□□ 1.28
PNKP-215ENST00000600910 SEPT4O43236 478 aa23.04■■□□□ 1.28
PNKP-215ENST00000600910 CCNE2O96020 404 aa23.04■■□□□ 1.28
PNKP-215ENST00000600910 GH1P01241 217 aa23.04■■□□□ 1.28
PNKP-215ENST00000600910 KRT76Q01546 638 aa23.04■■□□□ 1.28
PNKP-215ENST00000600910 ARHGAP1Q07960 439 aa23.04■■□□□ 1.28
PNKP-215ENST00000600910 TPRNQ4KMQ1 711 aa23.04■■□□□ 1.28
PNKP-215ENST00000600910 ADALQ6DHV7 355 aa23.04■■□□□ 1.28
PNKP-215ENST00000600910 FBXO46Q6PJ61 603 aaPredicted RBP23.04■■□□□ 1.28
PNKP-215ENST00000600910 LRWD1Q9UFC0 647 aa23.04■■□□□ 1.28
PNKP-215ENST00000600910 GNEQ9Y223 722 aaKnown RBP23.04■■□□□ 1.28
PNKP-215ENST00000600910 TELO2Q9Y4R8 837 aa23.04■■□□□ 1.28
PNKP-215ENST00000600910 EML1O00423 815 aa23.03■■□□□ 1.28
PNKP-215ENST00000600910 PRPF40AO75400 957 aaKnown RBP23.03■■□□□ 1.28
PNKP-215ENST00000600910 PKN2Q16513 984 aaKnown RBP23.03■■□□□ 1.28
PNKP-215ENST00000600910 ZNF746Q6NUN9 644 aaPredicted RBP23.03■■□□□ 1.28
PNKP-215ENST00000600910 ZNF579Q8NAF0 562 aaKnown RBP23.03■■□□□ 1.28
PNKP-215ENST00000600910 PRDM10Q9NQV6 1147 aa23.03■■□□□ 1.28
PNKP-215ENST00000600910 PP2D1A8MPX8 630 aa23.02■■□□□ 1.28
PNKP-215ENST00000600910 GOLGA6L22H0YM25 854 aa23.02■■□□□ 1.28
PNKP-215ENST00000600910 CDC25AP30304 524 aa23.02■■□□□ 1.28
PNKP-215ENST00000600910 LAMC2Q13753 1193 aa23.02■■□□□ 1.28
PNKP-215ENST00000600910 AK8Q96MA6 479 aa23.02■■□□□ 1.28
PNKP-215ENST00000600910 SPATA33Q96N06 139 aa23.02■■□□□ 1.28
PNKP-215ENST00000600910 ACTR2P61160 394 aa23.01■■□□□ 1.27
PNKP-215ENST00000600910 HSDL1Q3SXM5 330 aa23.01■■□□□ 1.27
PNKP-215ENST00000600910 SHC4Q6S5L8 630 aa23.01■■□□□ 1.27
PNKP-215ENST00000600910 MIER3Q7Z3K6 550 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms