RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 UNC13DQ70J99 1090 aa16.94■□□□□ 0.3
HIF3A-218ENST00000600383 PNMA8AQ86V59 439 aaPredicted RBP16.94■□□□□ 0.3
HIF3A-218ENST00000600383 TPH2Q8IWU9 490 aa16.94■□□□□ 0.3
HIF3A-218ENST00000600383 NPHP3-ACAD11A0A0J9YXS1 232 aa16.93■□□□□ 0.3
HIF3A-218ENST00000600383 PSMA7O14818 248 aa16.93■□□□□ 0.3
HIF3A-218ENST00000600383 KRT18P05783 430 aaKnown RBP16.93■□□□□ 0.3
HIF3A-218ENST00000600383 CACNB1Q02641 598 aaPredicted RBP16.93■□□□□ 0.3
HIF3A-218ENST00000600383 PGM5Q15124 567 aa16.93■□□□□ 0.3
HIF3A-218ENST00000600383 PCNX4Q63HM2 1172 aa16.93■□□□□ 0.3
HIF3A-218ENST00000600383 MAP1SQ66K74 1059 aaPredicted RBP16.93■□□□□ 0.3
HIF3A-218ENST00000600383 GPBP1Q86WP2 473 aa16.93■□□□□ 0.3
HIF3A-218ENST00000600383 ZC3H4Q9UPT8 1303 aaKnown RBP16.93■□□□□ 0.3
HIF3A-218ENST00000600383 PVALEFA0A1B0GWK0 134 aa16.93■□□□□ 0.3
HIF3A-218ENST00000600383 PMS1P54277 932 aaKnown RBP16.93■□□□□ 0.3
HIF3A-218ENST00000600383 GHRHRQ02643 423 aa16.93■□□□□ 0.3
HIF3A-218ENST00000600383 TKFCQ3LXA3 575 aa16.93■□□□□ 0.3
HIF3A-218ENST00000600383 ARMC9Q7Z3E5 817 aa16.93■□□□□ 0.3
HIF3A-218ENST00000600383 PXMP2Q9NR77 195 aa16.93■□□□□ 0.3
HIF3A-218ENST00000600383 STK24Q9Y6E0 443 aa16.93■□□□□ 0.3
HIF3A-218ENST00000600383 COL11A1P12107 1806 aaPredicted RBP16.92■□□□□ 0.3
HIF3A-218ENST00000600383 TESPA1A2RU30 521 aaPredicted RBP16.92■□□□□ 0.3
HIF3A-218ENST00000600383 TRAF5O00463 557 aa16.92■□□□□ 0.3
HIF3A-218ENST00000600383 SEMA3FQ13275 785 aa16.92■□□□□ 0.3
HIF3A-218ENST00000600383 MTMR1Q13613 665 aa16.92■□□□□ 0.3
HIF3A-218ENST00000600383 SAMD3Q8N6K7 520 aa16.92■□□□□ 0.3
HIF3A-218ENST00000600383 CACTINQ8WUQ7 758 aaKnown RBP16.92■□□□□ 0.3
HIF3A-218ENST00000600383 OPTNQ96CV9 577 aa16.92■□□□□ 0.3
HIF3A-218ENST00000600383 EEF2KMTQ96G04 330 aa16.92■□□□□ 0.3
HIF3A-218ENST00000600383 PDCD2LQ9BRP1 358 aa16.92■□□□□ 0.3
HIF3A-218ENST00000600383 TEKT3Q9BXF9 490 aa16.92■□□□□ 0.3
HIF3A-218ENST00000600383 UNC45AQ9H3U1 944 aa16.92■□□□□ 0.3
HIF3A-218ENST00000600383 ZHX3Q9H4I2 956 aa16.92■□□□□ 0.3
HIF3A-218ENST00000600383 RLFQ13129 1914 aa16.92■□□□□ 0.3
HIF3A-218ENST00000600383 SLITRK3O94933 977 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 IRX3P78415 501 aaPredicted RBP16.91■□□□□ 0.3
HIF3A-218ENST00000600383 PPP2R5CQ13362 524 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 KIAA0895Q8NCT3 520 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 PIGOQ8TEQ8 1089 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 DNAJC19Q96DA6 116 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 DYDC2Q96IM9 177 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 ACAD9Q9H845 621 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 PANK4Q9NVE7 773 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 TBC1D7Q9P0N9 293 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 PARP14Q460N5 1801 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 SPDYE5A6NIY4 337 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 ATP2A1O14983 1001 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 SLC26A4O43511 780 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 TRIM47Q96LD4 638 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 HSD17B14Q9BPX1 270 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 POLR3CQ9BUI4 534 aaPredicted RBP16.91■□□□□ 0.3
HIF3A-218ENST00000600383 BHMT2Q9H2M3 363 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 JADE2Q9NQC1 790 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 UBIAD1Q9Y5Z9 338 aa16.91■□□□□ 0.3
HIF3A-218ENST00000600383 A0A0G2JLL6 359 aaPredicted RBP16.9■□□□□ 0.3
HIF3A-218ENST00000600383 ZBTB39O15060 712 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 CYP11B2P19099 503 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 SLC12A3P55017 1021 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 LRRC41Q15345 812 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 CDKAL1Q5VV42 579 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 PRRT2Q7Z6L0 340 aaPredicted RBP16.9■□□□□ 0.3
HIF3A-218ENST00000600383 LRRC8AQ8IWT6 810 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 C17orf53Q8N3J3 647 aaPredicted RBP16.9■□□□□ 0.3
HIF3A-218ENST00000600383 DHTKD1Q96HY7 919 aaPredicted RBP16.9■□□□□ 0.3
HIF3A-218ENST00000600383 PAGR1Q9BTK6 254 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 SRRTQ9BXP5 876 aaKnown RBP16.9■□□□□ 0.3
HIF3A-218ENST00000600383 A1CFQ9NQ94 594 aaKnown RBP16.9■□□□□ 0.3
HIF3A-218ENST00000600383 SAMM50Q9Y512 469 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 MYPNQ86TC9 1320 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 CXCL11O14625 94 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 NR3C2P08235 984 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 ARSHQ5FYA8 562 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 PROCA1Q8NCQ7 364 aaPredicted RBP16.9■□□□□ 0.3
HIF3A-218ENST00000600383 RIT2Q99578 217 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 POLD4Q9HCU8 107 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 INTS13Q9NVM9 706 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 CYP39A1Q9NYL5 469 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 BTBD7Q9P203 1132 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 PYCARDQ9ULZ3 195 aa16.9■□□□□ 0.3
HIF3A-218ENST00000600383 OTOFQ9HC10 1997 aa16.89■□□□□ 0.29
HIF3A-218ENST00000600383 BCRP11274 1271 aa16.89■□□□□ 0.29
HIF3A-218ENST00000600383 COASYQ13057 564 aa16.89■□□□□ 0.29
HIF3A-218ENST00000600383 HERC4Q5GLZ8 1057 aaPredicted RBP16.89■□□□□ 0.29
HIF3A-218ENST00000600383 ANKRD40Q6AI12 368 aa16.89■□□□□ 0.29
HIF3A-218ENST00000600383 LBX2Q6XYB7 198 aa16.89■□□□□ 0.29
HIF3A-218ENST00000600383 ANKRD35Q8N283 1001 aa16.89■□□□□ 0.29
HIF3A-218ENST00000600383 SYT2Q8N9I0 419 aaPredicted RBP16.89■□□□□ 0.29
HIF3A-218ENST00000600383 BANK1Q8NDB2 785 aa16.89■□□□□ 0.29
HIF3A-218ENST00000600383 GLIS3Q8NEA6 775 aa16.89■□□□□ 0.29
HIF3A-218ENST00000600383 NSUN6Q8TEA1 469 aaKnown RBP16.89■□□□□ 0.29
HIF3A-218ENST00000600383 P2RX5Q93086 422 aa16.89■□□□□ 0.29
HIF3A-218ENST00000600383 SLC10A4Q96EP9 437 aa16.89■□□□□ 0.29
HIF3A-218ENST00000600383 AGO4Q9HCK5 861 aaKnown RBP16.89■□□□□ 0.29
HIF3A-218ENST00000600383 IMPACTQ9P2X3 320 aa16.89■□□□□ 0.29
HIF3A-218ENST00000600383 HOXA7P31268 230 aaPredicted RBP16.88■□□□□ 0.29
HIF3A-218ENST00000600383 CLCN1P35523 988 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 ITGB3BPQ13352 177 aaPredicted RBP16.88■□□□□ 0.29
HIF3A-218ENST00000600383 PPIL2Q13356 520 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 VSTM4Q8IW00 320 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 CCDC65Q8IXS2 484 aa16.88■□□□□ 0.29
HIF3A-218ENST00000600383 CSGALNACT2Q8N6G5 542 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms