RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 SMARCAL1Q9NZC9 954 aa12.77□□□□□ -0.37
ARHGEF1-220ENST00000600274 FAM86B1E9PN63 330 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 FAM86B2P0C5J1 330 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 GPS2Q13227 327 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 MIIPQ5JXC2 388 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 SIAH1Q8IUQ4 282 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 C10orf67Q8IYJ2 551 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 CNKSR1Q969H4 720 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 IFIH1Q9BYX4 1025 aaKnown RBP12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 CALCOCO1Q9P1Z2 691 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 COL24A1Q17RW2 1714 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 DDX60LQ5H9U9 1706 aaKnown RBP12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 LAMB1P07942 1786 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 YDJCA8MPS7 323 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 hCG_1984214I3L0E3 225 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 GCNT3O95395 438 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 H2AFXP16104 143 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 KRT83P78385 493 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 DGKZQ13574 1117 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 ZNF713Q8N859 430 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 CCDC102AQ96A19 550 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 GLIS2Q9BZE0 524 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 DNM3Q9UQ16 869 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 PCDHB13Q9Y5F0 798 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 MOCS3O95396 460 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 SMARCA1P28370 1054 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 ZBED6P86452 979 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 ADAM9Q13443 819 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 DEFB132Q7Z7B7 95 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 RDH13Q8NBN7 331 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 PRR12Q9ULL5 1215 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 SAMM50Q9Y512 469 aa12.76□□□□□ -0.37
ARHGEF1-220ENST00000600274 PSMD14O00487 310 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 MEIS2O14770 477 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 FGFR1OPO95684 399 aaKnown RBP12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 RXRBP28702 533 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 NT5C2P49902 561 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 CASP5P51878 434 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 GFPT1Q06210 699 aaPredicted RBP12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 MAN2A1Q16706 1144 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 SFR1Q86XK3 245 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 CATSPER3Q86XQ3 398 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 GPR161Q8N6U8 529 aaKnown RBP12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 CEP112Q8N8E3 955 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 EMILIN3Q9NT22 766 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 STK32BQ9NY57 414 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 ANKRD65E5RJM6 399 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 SORBS3O60504 671 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 TBCAO75347 108 aaKnown RBP12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 NR2F2P24468 414 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 HNRNPH2P55795 449 aaKnown RBP12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 RASSF7Q02833 373 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 PDIA5Q14554 519 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 PPP4R3AQ6IN85 833 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 CENPPQ6IPU0 288 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 GSPT2Q8IYD1 628 aaKnown RBP12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 FLAD1Q8NFF5 587 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 PNKPQ96T60 521 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 NT5C3AQ9H0P0 336 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 RASSF10A6NK89 507 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 STAT2P52630 851 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 GUF1Q8N442 669 aaKnown RBP12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 ERMNQ8TAM6 284 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 EHD2Q9NZN4 543 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 TAF1LQ8IZX4 1826 aa12.75□□□□□ -0.37
ARHGEF1-220ENST00000600274 SBF2Q86WG5 1849 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 A0A1W2PQC6 194 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 SHTN1A0MZ66 631 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 NCK2O43639 380 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 ACTN1P12814 892 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 FKBP3Q00688 224 aaKnown RBP12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 DCAF4Q8WV16 495 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 NYAP2Q9P242 653 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 COL4A3BPQ9Y5P4 624 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 FHOD1Q9Y613 1164 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 PVALEFA0A1B0GWK0 134 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 SASH3O75995 380 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 OAS2P29728 719 aaKnown RBP12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 MAGEA1P43355 309 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 KIF11P52732 1056 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 KCNA1Q09470 495 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 KIAA1755Q5JYT7 1200 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 HAUS3Q68CZ6 603 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 CC2D1AQ6P1N0 951 aaPredicted RBP12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 SECISBP2LQ93073 1101 aaKnown RBP12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 NUP58Q9BVL2 599 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 LRRC27Q9C0I9 530 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 RABEP2Q9H5N1 569 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 HAUS4Q9H6D7 363 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 ARHGEF10LQ9HCE6 1279 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 MYBP10242 640 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 GCFC2P16383 781 aaKnown RBP12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 CYP11B2P19099 503 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 SP4Q02446 784 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 LONRF2Q1L5Z9 754 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 RABGGTAQ92696 567 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 DNAJC19Q96DA6 116 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 DNAJC7Q99615 494 aa12.74□□□□□ -0.37
ARHGEF1-220ENST00000600274 REEP2Q9BRK0 252 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms