RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 UBA7P41226 1012 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 FXR2P51116 673 aaKnown RBP eCLIP14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 SETQ01105 290 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 PRKCZQ05513 592 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 FAM110CQ1W6H9 321 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 NIPA1Q7RTP0 329 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 NLRX1Q86UT6 975 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 VSIG10LQ86VR7 867 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 FMR1NBQ8N0W7 255 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 SLAIN1Q8ND83 568 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 CYP2W1Q8TAV3 490 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 SYMPKQ92797 1274 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 HAS1Q92839 578 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 EPSTI1Q96J88 318 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 AK8Q96MA6 479 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 PYM1Q9BRP8 204 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 PANK2Q9BZ23 570 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 PORCNQ9H237 461 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 JADE2Q9NQC1 790 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 TMEM63CQ9P1W3 806 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 LRWD1Q9UFC0 647 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 CCDC39Q9UFE4 941 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 HPSEQ9Y251 543 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 UBIAD1Q9Y5Z9 338 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 IVNS1ABPQ9Y6Y0 642 aa14.72□□□□□ -0.05
SHKBP1-209ENST00000595803 MSH4O15457 936 aa14.71□□□□□ -0.05
SHKBP1-209ENST00000595803 TFRCP02786 760 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-209ENST00000595803 SYN1P17600 705 aa14.71□□□□□ -0.05
SHKBP1-209ENST00000595803 PLA2G5P39877 138 aa14.71□□□□□ -0.05
SHKBP1-209ENST00000595803 MRPS9P82933 396 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-209ENST00000595803 CNTN2Q02246 1040 aa14.71□□□□□ -0.05
SHKBP1-209ENST00000595803 SNW1Q13573 536 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-209ENST00000595803 USP49Q70CQ1 688 aa14.71□□□□□ -0.05
SHKBP1-209ENST00000595803 IL31RAQ8NI17 732 aa14.71□□□□□ -0.05
SHKBP1-209ENST00000595803 DIS3LQ8TF46 1054 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-209ENST00000595803 PAWRQ96IZ0 340 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-209ENST00000595803 UIMC1Q96RL1 719 aa14.71□□□□□ -0.05
SHKBP1-209ENST00000595803 SDF4Q9BRK5 362 aa14.71□□□□□ -0.05
SHKBP1-209ENST00000595803 NUP62CLQ9H1M0 184 aa14.71□□□□□ -0.05
SHKBP1-209ENST00000595803 KCNMB3Q9NPA1 279 aa14.71□□□□□ -0.05
SHKBP1-209ENST00000595803 ADGRA2Q96PE1 1338 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 IGLV3-22A0A075B6J6 115 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 SOWAHBA6NEL2 793 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 CTAGE5O15320 804 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 POLR2DO15514 142 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 STAM2O75886 525 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 ARP10275 920 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 BCRP11274 1271 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 ITGB5P18084 799 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 MAPK4P31152 587 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 ALDH5A1P51649 535 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 STXBP2Q15833 593 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 PLEKHH3Q7Z736 793 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 CABP7Q86V35 215 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 FAM133AQ8N9E0 248 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 RASSF8Q8NHQ8 419 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 ETNPPLQ8TBG4 499 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 LENG9Q96B70 501 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 CCDC34Q96HJ3 373 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 TIGD1Q96MW7 591 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 FAM161BQ96MY7 647 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 DEFB118Q96PH6 123 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 ZNF577Q9BSK1 485 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 WDR11Q9BZH6 1224 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 UBE2OQ9C0C9 1292 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 CCSER1Q9C0I3 900 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 TNMDQ9H2S6 317 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 CLSTN2Q9H4D0 955 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 STK24Q9Y6E0 443 aa14.7□□□□□ -0.06
SHKBP1-209ENST00000595803 MAFGO15525 162 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 EIF3JO75822 258 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 PGK2P07205 417 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 CDC25AP30304 524 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 PDE4DQ08499 809 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 MTMR1Q13613 665 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 CAMK4Q16566 473 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 KRT79Q5XKE5 535 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 NECAB2Q7Z6G3 386 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 ABRAQ8N0Z2 381 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 PDILTQ8N807 584 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 IGSF22Q8N9C0 903 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 IQUBQ8NA54 791 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 CNNM3Q8NE01 707 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 SLC5A5Q92911 643 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 GJA10Q969M2 543 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 CALML4Q96GE6 196 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 TEKT3Q9BXF9 490 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 USP25Q9UHP3 1055 aa14.69□□□□□ -0.06
SHKBP1-209ENST00000595803 DNAJC25-GNG10A0A024R161 153 aa14.68□□□□□ -0.06
SHKBP1-209ENST00000595803 PP2D1A8MPX8 630 aa14.68□□□□□ -0.06
SHKBP1-209ENST00000595803 GAS7O60861 476 aa14.68□□□□□ -0.06
SHKBP1-209ENST00000595803 INHAP05111 366 aa14.68□□□□□ -0.06
SHKBP1-209ENST00000595803 ZRSR1Q15695 479 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-209ENST00000595803 ZSCAN23Q3MJ62 389 aa14.68□□□□□ -0.06
SHKBP1-209ENST00000595803 GNPTABQ3T906 1256 aa14.68□□□□□ -0.06
SHKBP1-209ENST00000595803 LONRF3Q496Y0 759 aa14.68□□□□□ -0.06
SHKBP1-209ENST00000595803 LRCH2Q5VUJ6 765 aa14.68□□□□□ -0.06
SHKBP1-209ENST00000595803 RRAGBQ5VZM2 374 aa14.68□□□□□ -0.06
SHKBP1-209ENST00000595803 FAM109BQ6ICB4 259 aaPredicted RBP14.68□□□□□ -0.06
SHKBP1-209ENST00000595803 KANK3Q6NY19 840 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms