RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 KATNAL1Q9BW62 490 aa16.89■□□□□ 0.29
USE1-205ENST00000594724 JADE2Q9NQC1 790 aa16.89■□□□□ 0.29
USE1-205ENST00000594724 GTF2IRD1Q9UHL9 959 aa16.89■□□□□ 0.29
USE1-205ENST00000594724 LGALS2P05162 132 aa16.88■□□□□ 0.29
USE1-205ENST00000594724 CLK2P49760 499 aaKnown RBP16.88■□□□□ 0.29
USE1-205ENST00000594724 ZNF200P98182 395 aaPredicted RBP16.88■□□□□ 0.29
USE1-205ENST00000594724 MTMR1Q13613 665 aa16.88■□□□□ 0.29
USE1-205ENST00000594724 GPR153Q6NV75 609 aa16.88■□□□□ 0.29
USE1-205ENST00000594724 DEFB123Q8N688 67 aa16.88■□□□□ 0.29
USE1-205ENST00000594724 CTAGE1Q96RT6 745 aa16.88■□□□□ 0.29
USE1-205ENST00000594724 MXRA8Q9BRK3 442 aa16.88■□□□□ 0.29
USE1-205ENST00000594724 RNF26Q9BY78 433 aaPredicted RBP16.88■□□□□ 0.29
USE1-205ENST00000594724 GLT8D2Q9H1C3 349 aa16.88■□□□□ 0.29
USE1-205ENST00000594724 H3BRB1 525 aa16.87■□□□□ 0.29
USE1-205ENST00000594724 FGBP02675 491 aa16.87■□□□□ 0.29
USE1-205ENST00000594724 KCNA2P16389 499 aa16.87■□□□□ 0.29
USE1-205ENST00000594724 HIC1Q14526 733 aa16.87■□□□□ 0.29
USE1-205ENST00000594724 UTP14CQ5TAP6 766 aaKnown RBP16.87■□□□□ 0.29
USE1-205ENST00000594724 RETREG2Q8NC44 543 aa16.87■□□□□ 0.29
USE1-205ENST00000594724 VWCEQ96DN2 955 aa16.87■□□□□ 0.29
USE1-205ENST00000594724 CDHR1Q96JP9 859 aa16.87■□□□□ 0.29
USE1-205ENST00000594724 ZMYND12Q9H0C1 365 aa16.87■□□□□ 0.29
USE1-205ENST00000594724 TUT1Q9H6E5 874 aaKnown RBP16.87■□□□□ 0.29
USE1-205ENST00000594724 C6orf50Q9HD87 102 aa16.87■□□□□ 0.29
USE1-205ENST00000594724 DOCK5Q9H7D0 1870 aa16.86■□□□□ 0.29
USE1-205ENST00000594724 LAMA2P24043 3122 aaKnown RBP16.86■□□□□ 0.29
USE1-205ENST00000594724 ESYT2A0FGR8 921 aa16.86■□□□□ 0.29
USE1-205ENST00000594724 CPLX1O14810 134 aa16.86■□□□□ 0.29
USE1-205ENST00000594724 ARP10275 920 aa16.86■□□□□ 0.29
USE1-205ENST00000594724 ANAPC15P60006 121 aa16.86■□□□□ 0.29
USE1-205ENST00000594724 SSRP1Q08945 709 aaKnown RBP16.86■□□□□ 0.29
USE1-205ENST00000594724 AP3B2Q13367 1082 aa16.86■□□□□ 0.29
USE1-205ENST00000594724 BFSP2Q13515 415 aa16.86■□□□□ 0.29
USE1-205ENST00000594724 PSRC1Q6PGN9 363 aaPredicted RBP16.86■□□□□ 0.29
USE1-205ENST00000594724 DEFB128Q7Z7B8 93 aa16.86■□□□□ 0.29
USE1-205ENST00000594724 TRIM50Q86XT4 487 aa16.86■□□□□ 0.29
USE1-205ENST00000594724 TEX2Q8IWB9 1127 aa16.86■□□□□ 0.29
USE1-205ENST00000594724 GIMAP8Q8ND71 665 aaPredicted RBP16.86■□□□□ 0.29
USE1-205ENST00000594724 CCDC12Q8WUD4 166 aaPredicted RBP16.86■□□□□ 0.29
USE1-205ENST00000594724 DHX38Q92620 1227 aaKnown RBP16.86■□□□□ 0.29
USE1-205ENST00000594724 KCNH7Q9NS40 1196 aa16.86■□□□□ 0.29
USE1-205ENST00000594724 VPS54Q9P1Q0 977 aa16.86■□□□□ 0.29
USE1-205ENST00000594724 MAFGO15525 162 aa16.85■□□□□ 0.29
USE1-205ENST00000594724 DTNBO60941 627 aa16.85■□□□□ 0.29
USE1-205ENST00000594724 IQCF3P0C7M6 154 aa16.85■□□□□ 0.29
USE1-205ENST00000594724 SREBF1P36956 1147 aa16.85■□□□□ 0.29
USE1-205ENST00000594724 SMAD3P84022 425 aaKnown RBP16.85■□□□□ 0.29
USE1-205ENST00000594724 ARHGAP4P98171 946 aa16.85■□□□□ 0.29
USE1-205ENST00000594724 FAM109BQ6ICB4 259 aaPredicted RBP16.85■□□□□ 0.29
USE1-205ENST00000594724 OTOP2Q7RTS6 562 aa16.85■□□□□ 0.29
USE1-205ENST00000594724 RPUSD2Q8IZ73 545 aaKnown RBP16.85■□□□□ 0.29
USE1-205ENST00000594724 RASGRP4Q8TDF6 673 aa16.85■□□□□ 0.29
USE1-205ENST00000594724 CXXC1Q9P0U4 656 aaPredicted RBP16.85■□□□□ 0.29
USE1-205ENST00000594724 TPCN1Q9ULQ1 816 aa16.85■□□□□ 0.29
USE1-205ENST00000594724 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.84■□□□□ 0.29
USE1-205ENST00000594724 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.84■□□□□ 0.29
USE1-205ENST00000594724 GSTTP1A0A1W2PQM5 241 aa16.84■□□□□ 0.29
USE1-205ENST00000594724 RBAK-RBAKDNI3L0D1 243 aa16.84■□□□□ 0.29
USE1-205ENST00000594724 PITPNM1O00562 1244 aa16.84■□□□□ 0.29
USE1-205ENST00000594724 SMIM10L2AP0DMW4 78 aa16.84■□□□□ 0.29
USE1-205ENST00000594724 SMIM10L2BP0DMW5 78 aa16.84■□□□□ 0.29
USE1-205ENST00000594724 GNA11P29992 359 aa16.84■□□□□ 0.29
USE1-205ENST00000594724 TCF7P36402 384 aaPredicted RBP16.84■□□□□ 0.29
USE1-205ENST00000594724 ZNF76P36508 570 aa16.84■□□□□ 0.29
USE1-205ENST00000594724 CEP55Q53EZ4 464 aa16.84■□□□□ 0.29
USE1-205ENST00000594724 RASIP1Q5U651 963 aa16.84■□□□□ 0.29
USE1-205ENST00000594724 TRIM22Q8IYM9 498 aa16.84■□□□□ 0.29
USE1-205ENST00000594724 REXO1Q8N1G1 1221 aaKnown RBP16.84■□□□□ 0.29
USE1-205ENST00000594724 SEPT1Q8WYJ6 367 aa16.84■□□□□ 0.29
USE1-205ENST00000594724 HERVK_113Q902F9 699 aa16.84■□□□□ 0.29
USE1-205ENST00000594724 WNT8BQ93098 351 aa16.84■□□□□ 0.29
USE1-205ENST00000594724 FAM161BQ96MY7 647 aa16.84■□□□□ 0.29
USE1-205ENST00000594724 MTMR10Q9NXD2 777 aa16.84■□□□□ 0.29
USE1-205ENST00000594724 GRXCR1A8MXD5 290 aa16.83■□□□□ 0.28
USE1-205ENST00000594724 MEIS1O00470 390 aa16.83■□□□□ 0.28
USE1-205ENST00000594724 AK2P54819 239 aa16.83■□□□□ 0.28
USE1-205ENST00000594724 SCRN1Q12765 414 aa16.83■□□□□ 0.28
USE1-205ENST00000594724 PTK7Q13308 1070 aa16.83■□□□□ 0.28
USE1-205ENST00000594724 CCDC155Q8N6L0 562 aa16.83■□□□□ 0.28
USE1-205ENST00000594724 CAGE1Q8TC20 777 aa16.83■□□□□ 0.28
USE1-205ENST00000594724 AIFM3Q96NN9 605 aa16.83■□□□□ 0.28
USE1-205ENST00000594724 UIMC1Q96RL1 719 aa16.83■□□□□ 0.28
USE1-205ENST00000594724 SLKQ9H2G2 1235 aaPredicted RBP16.83■□□□□ 0.28
USE1-205ENST00000594724 RNPEPQ9H4A4 650 aa16.83■□□□□ 0.28
USE1-205ENST00000594724 C17orf102A2RUQ5 167 aa16.82■□□□□ 0.28
USE1-205ENST00000594724 FAM86B1E9PN63 330 aa16.82■□□□□ 0.28
USE1-205ENST00000594724 EIF5BO60841 1220 aaKnown RBP16.82■□□□□ 0.28
USE1-205ENST00000594724 DEXIO95424 95 aa16.82■□□□□ 0.28
USE1-205ENST00000594724 FAM86B2P0C5J1 330 aa16.82■□□□□ 0.28
USE1-205ENST00000594724 CKBP12277 381 aa16.82■□□□□ 0.28
USE1-205ENST00000594724 NLRP5P59047 1200 aa16.82■□□□□ 0.28
USE1-205ENST00000594724 ITGB3BPQ13352 177 aaPredicted RBP16.82■□□□□ 0.28
USE1-205ENST00000594724 CPLX2Q6PUV4 134 aaKnown RBP16.82■□□□□ 0.28
USE1-205ENST00000594724 PLA2G4DQ86XP0 818 aa16.82■□□□□ 0.28
USE1-205ENST00000594724 CCDC148Q8NFR7 591 aa16.82■□□□□ 0.28
USE1-205ENST00000594724 CRYGNQ8WXF5 182 aa16.82■□□□□ 0.28
USE1-205ENST00000594724 ATP6V0A1Q93050 837 aa16.82■□□□□ 0.28
USE1-205ENST00000594724 IL17RAQ96F46 866 aa16.82■□□□□ 0.28
USE1-205ENST00000594724 AGO4Q9HCK5 861 aaKnown RBP16.82■□□□□ 0.28
USE1-205ENST00000594724 SH3GLB2Q9NR46 395 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms