RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 MPP4Q96JB8 637 aa5.05□□□□□ -1.6
LINC00649-204ENST00000593977 SCLT1Q96NL6 688 aa5.05□□□□□ -1.6
LINC00649-204ENST00000593977 LACRTQ9GZZ8 138 aa5.05□□□□□ -1.6
LINC00649-204ENST00000593977 IFT122Q9HBG6 1241 aa5.05□□□□□ -1.6
LINC00649-204ENST00000593977 LUC7LQ9NQ29 371 aaKnown RBP5.05□□□□□ -1.6
LINC00649-204ENST00000593977 KRT82Q9NSB4 513 aa5.05□□□□□ -1.6
LINC00649-204ENST00000593977 MTMR10Q9NXD2 777 aa5.05□□□□□ -1.6
LINC00649-204ENST00000593977 GTF2IRD1Q9UHL9 959 aa5.05□□□□□ -1.6
LINC00649-204ENST00000593977 DACH1Q9UI36 760 aa5.05□□□□□ -1.6
LINC00649-204ENST00000593977 ASAP1Q9ULH1 1129 aa5.05□□□□□ -1.6
LINC00649-204ENST00000593977 SNCAIPQ9Y6H5 919 aa5.05□□□□□ -1.6
LINC00649-204ENST00000593977 PRUNE2Q8WUY3 3088 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 FAM155AB1AL88 458 aaPredicted RBP5.04□□□□□ -1.6
LINC00649-204ENST00000593977 GFRA2O00451 464 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 HIP1RO75146 1068 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 ZRANB2O95218 330 aaKnown RBP eCLIP5.04□□□□□ -1.6
LINC00649-204ENST00000593977 CYP11A1P05108 521 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 ARAFP10398 606 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 PHKG2P15735 406 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 TYRP1P17643 537 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 ADH6P28332 368 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 ARL4DP49703 201 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 PCBP4P57723 403 aaKnown RBP5.04□□□□□ -1.6
LINC00649-204ENST00000593977 ZNF280AP59817 542 aaPredicted RBP5.04□□□□□ -1.6
LINC00649-204ENST00000593977 ITPK1Q13572 414 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 GALEQ14376 348 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 GRM3Q14832 879 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 SAFBQ15424 915 aaKnown RBP eCLIP5.04□□□□□ -1.6
LINC00649-204ENST00000593977 CCDC96Q2M329 555 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 RGL3Q3MIN7 710 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 ZC3H12BQ5HYM0 836 aaKnown RBP5.04□□□□□ -1.6
LINC00649-204ENST00000593977 HYIQ5T013 277 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 LCE2CQ5TA81 110 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 HGSNATQ68CP4 663 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 LVRNQ6Q4G3 990 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 HDXQ7Z353 690 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 SKAP1Q86WV1 359 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 SYNE4Q8N205 404 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 CNTD1Q8N815 330 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 ZSCAN1Q8NBB4 408 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 KCNH5Q8NCM2 988 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 COG1Q8WTW3 980 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 DDX1Q92499 740 aaKnown RBP5.04□□□□□ -1.6
LINC00649-204ENST00000593977 WNT8BQ93098 351 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 SKA1Q96BD8 255 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 EXOC2Q96KP1 924 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 LPIN3Q9BQK8 851 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 LRRC27Q9C0I9 530 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 EPN3Q9H201 632 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 PHAXQ9H814 394 aaKnown RBP5.04□□□□□ -1.6
LINC00649-204ENST00000593977 CNNM2Q9H8M5 875 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 SH2B1Q9NRF2 756 aaPredicted RBP5.04□□□□□ -1.6
LINC00649-204ENST00000593977 GMIPQ9P107 970 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 EVLQ9UI08 416 aaPredicted RBP5.04□□□□□ -1.6
LINC00649-204ENST00000593977 FBXO2Q9UK22 296 aaPredicted RBP5.04□□□□□ -1.6
LINC00649-204ENST00000593977 NAGPAQ9UK23 515 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 PHTF1Q9UMS5 762 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 NOL7Q9UMY1 257 aaKnown RBP5.04□□□□□ -1.6
LINC00649-204ENST00000593977 PCDHA4Q9UN74 947 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 RABGAP1Q9Y3P9 1069 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 LAMB4A4D0S4 1761 aa5.04□□□□□ -1.6
LINC00649-204ENST00000593977 RNF123Q5XPI4 1314 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 A0A1W2PPC1 479 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 C2CD2LO14523 706 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 CELF2O95319 508 aaKnown RBP5.03□□□□□ -1.6
LINC00649-204ENST00000593977 RBP3P10745 1247 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 EPHA1P21709 976 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 KIF23Q02241 960 aaPredicted RBP5.03□□□□□ -1.6
LINC00649-204ENST00000593977 GSTM4Q03013 218 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 C19orf57Q0VDD7 668 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 STK3Q13188 491 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 PCBP1Q15365 356 aaKnown RBP eCLIP5.03□□□□□ -1.6
LINC00649-204ENST00000593977 PUM3Q15397 648 aaKnown RBP5.03□□□□□ -1.6
LINC00649-204ENST00000593977 ALDH1L2Q3SY69 923 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 MINDY4Q4G0A6 757 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 WIPI1Q5MNZ9 446 aaPredicted RBP5.03□□□□□ -1.6
LINC00649-204ENST00000593977 SYDE2Q5VT97 1194 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 PKN3Q6P5Z2 889 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 C1orf228Q6PIY5 440 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 Q7L0L9 218 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 SPATS2Q86XZ4 545 aaKnown RBP5.03□□□□□ -1.6
LINC00649-204ENST00000593977 PARD3BQ8TEW8 1205 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 SMARCC1Q92922 1105 aaPredicted RBP5.03□□□□□ -1.6
LINC00649-204ENST00000593977 GJA10Q969M2 543 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 CORO1BQ9BR76 489 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 CDK19Q9BWU1 502 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 PUS7LQ9H0K6 701 aaKnown RBP5.03□□□□□ -1.6
LINC00649-204ENST00000593977 DDX20Q9UHI6 824 aaKnown RBP5.03□□□□□ -1.6
LINC00649-204ENST00000593977 FRMD4BQ9Y2L6 1034 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 SPEF1Q9Y4P9 236 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 TRPM7Q96QT4 1865 aa5.03□□□□□ -1.6
LINC00649-204ENST00000593977 ZNF541Q9H0D2 1346 aa5.02□□□□□ -1.61
LINC00649-204ENST00000593977 CDC14CA4D256 554 aa5.02□□□□□ -1.61
LINC00649-204ENST00000593977 hCG_1984214I3L0E3 225 aa5.02□□□□□ -1.61
LINC00649-204ENST00000593977 GPR25O00155 361 aa5.02□□□□□ -1.61
LINC00649-204ENST00000593977 FBXO21O94952 628 aa5.02□□□□□ -1.61
LINC00649-204ENST00000593977 RHOBTB3O94955 611 aa5.02□□□□□ -1.61
LINC00649-204ENST00000593977 TNFAIP3P21580 790 aa5.02□□□□□ -1.61
LINC00649-204ENST00000593977 TM4SF1P30408 202 aa5.02□□□□□ -1.61
LINC00649-204ENST00000593977 RENBPP51606 427 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms