RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 DPCR1Q3MIW9 517 aa23.33■■□□□ 1.33
PNKP-203ENST00000593946 GPRASP2Q96D09 838 aa23.33■■□□□ 1.33
PNKP-203ENST00000593946 TEKT3Q9BXF9 490 aa23.33■■□□□ 1.33
PNKP-203ENST00000593946 ZCCHC17Q9NP64 241 aaKnown RBP23.33■■□□□ 1.33
PNKP-203ENST00000593946 MAN1B1Q9UKM7 699 aa23.33■■□□□ 1.33
PNKP-203ENST00000593946 MCM3APO60318 1980 aa23.33■■□□□ 1.33
PNKP-203ENST00000593946 DNAJC25-GNG10A0A024R161 153 aa23.33■■□□□ 1.32
PNKP-203ENST00000593946 EML1O00423 815 aa23.33■■□□□ 1.32
PNKP-203ENST00000593946 DHX15O43143 795 aaKnown RBP23.33■■□□□ 1.32
PNKP-203ENST00000593946 MED24O75448 989 aa23.33■■□□□ 1.32
PNKP-203ENST00000593946 RPA1P27694 616 aa23.33■■□□□ 1.32
PNKP-203ENST00000593946 TRIML1Q8N9V2 468 aa23.33■■□□□ 1.32
PNKP-203ENST00000593946 GSDMAQ96QA5 445 aa23.33■■□□□ 1.32
PNKP-203ENST00000593946 MMP19Q99542 508 aa23.33■■□□□ 1.32
PNKP-203ENST00000593946 ADD3Q9UEY8 706 aaKnown RBP23.33■■□□□ 1.32
PNKP-203ENST00000593946 LOXHD1Q8IVV2 1947 aa23.32■■□□□ 1.32
PNKP-203ENST00000593946 POTEB3A0JP26 581 aa23.32■■□□□ 1.32
PNKP-203ENST00000593946 SOWAHBA6NEL2 793 aa23.32■■□□□ 1.32
PNKP-203ENST00000593946 FAM155AB1AL88 458 aaPredicted RBP23.32■■□□□ 1.32
PNKP-203ENST00000593946 IGF2BP3O00425 579 aaKnown RBP eCLIP23.32■■□□□ 1.32
PNKP-203ENST00000593946 MAFGO15525 162 aa23.32■■□□□ 1.32
PNKP-203ENST00000593946 RGS20O76081 388 aa23.32■■□□□ 1.32
PNKP-203ENST00000593946 TOMM70O94826 608 aa23.32■■□□□ 1.32
PNKP-203ENST00000593946 ZNF165P49910 485 aa23.32■■□□□ 1.32
PNKP-203ENST00000593946 ITGB3BPQ13352 177 aaPredicted RBP23.32■■□□□ 1.32
PNKP-203ENST00000593946 CUL4BQ13620 913 aa23.32■■□□□ 1.32
PNKP-203ENST00000593946 POTEBQ6S5H4 581 aa23.32■■□□□ 1.32
PNKP-203ENST00000593946 KCNK18Q7Z418 384 aa23.32■■□□□ 1.32
PNKP-203ENST00000593946 LARP4BQ92615 738 aaKnown RBP23.32■■□□□ 1.32
PNKP-203ENST00000593946 EFCC1Q9HA90 598 aa23.32■■□□□ 1.32
PNKP-203ENST00000593946 SPATA31C1P0DKV0 1188 aa23.31■■□□□ 1.32
PNKP-203ENST00000593946 FCER1AP12319 257 aa23.31■■□□□ 1.32
PNKP-203ENST00000593946 BMP6P22004 513 aa23.31■■□□□ 1.32
PNKP-203ENST00000593946 EDNRBP24530 442 aa23.31■■□□□ 1.32
PNKP-203ENST00000593946 MORC3Q14149 939 aa23.31■■□□□ 1.32
PNKP-203ENST00000593946 KCTD2Q14681 263 aa23.31■■□□□ 1.32
PNKP-203ENST00000593946 NLRX1Q86UT6 975 aa23.31■■□□□ 1.32
PNKP-203ENST00000593946 CATSPER3Q86XQ3 398 aa23.31■■□□□ 1.32
PNKP-203ENST00000593946 RAD54LQ92698 747 aa23.31■■□□□ 1.32
PNKP-203ENST00000593946 HHIPL1Q96JK4 782 aa23.31■■□□□ 1.32
PNKP-203ENST00000593946 POLR3CQ9BUI4 534 aaPredicted RBP23.31■■□□□ 1.32
PNKP-203ENST00000593946 BLZF1Q9H2G9 400 aa23.31■■□□□ 1.32
PNKP-203ENST00000593946 UNC45AQ9H3U1 944 aa23.31■■□□□ 1.32
PNKP-203ENST00000593946 CBX8Q9HC52 389 aa23.31■■□□□ 1.32
PNKP-203ENST00000593946 TMEM88BA6NKF7 163 aa23.3■■□□□ 1.32
PNKP-203ENST00000593946 SEMA3FQ13275 785 aa23.3■■□□□ 1.32
PNKP-203ENST00000593946 STXBP2Q15833 593 aa23.3■■□□□ 1.32
PNKP-203ENST00000593946 FAM110CQ1W6H9 321 aa23.3■■□□□ 1.32
PNKP-203ENST00000593946 ISM2Q6H9L7 571 aa23.3■■□□□ 1.32
PNKP-203ENST00000593946 CCDC102AQ96A19 550 aa23.3■■□□□ 1.32
PNKP-203ENST00000593946 EIF2AK1Q9BQI3 630 aaKnown RBP23.3■■□□□ 1.32
PNKP-203ENST00000593946 TBC1D22BQ9NU19 505 aa23.3■■□□□ 1.32
PNKP-203ENST00000593946 ADGRA2Q96PE1 1338 aa23.3■■□□□ 1.32
PNKP-203ENST00000593946 CHMP2AO43633 222 aa23.3■■□□□ 1.32
PNKP-203ENST00000593946 WDR78Q5VTH9 848 aa23.3■■□□□ 1.32
PNKP-203ENST00000593946 SV2BQ7L1I2 683 aa23.3■■□□□ 1.32
PNKP-203ENST00000593946 FGD4Q96M96 766 aa23.3■■□□□ 1.32
PNKP-203ENST00000593946 HSD17B14Q9BPX1 270 aa23.3■■□□□ 1.32
PNKP-203ENST00000593946 PKD2L1Q9P0L9 805 aa23.3■■□□□ 1.32
PNKP-203ENST00000593946 ABT1Q9ULW3 272 aaKnown RBP23.3■■□□□ 1.32
PNKP-203ENST00000593946 KIAA1024Q9UPX6 916 aa23.3■■□□□ 1.32
PNKP-203ENST00000593946 ATP9AO75110 1047 aa23.29■■□□□ 1.32
PNKP-203ENST00000593946 EIF3JO75822 258 aaKnown RBP23.29■■□□□ 1.32
PNKP-203ENST00000593946 PGK2P07205 417 aa23.29■■□□□ 1.32
PNKP-203ENST00000593946 INHBEP58166 350 aa23.29■■□□□ 1.32
PNKP-203ENST00000593946 AMPD3Q01432 767 aa23.29■■□□□ 1.32
PNKP-203ENST00000593946 FSTL1Q12841 308 aa23.29■■□□□ 1.32
PNKP-203ENST00000593946 MCM6Q14566 821 aa23.29■■□□□ 1.32
PNKP-203ENST00000593946 CDHR1Q96JP9 859 aa23.29■■□□□ 1.32
PNKP-203ENST00000593946 TRIM9Q9C026 710 aa23.29■■□□□ 1.32
PNKP-203ENST00000593946 NAT10Q9H0A0 1025 aaKnown RBP23.29■■□□□ 1.32
PNKP-203ENST00000593946 POTEFA5A3E0 1075 aa23.28■■□□□ 1.32
PNKP-203ENST00000593946 UVSSAQ2YD98 709 aa23.28■■□□□ 1.32
PNKP-203ENST00000593946 GNPTABQ3T906 1256 aa23.28■■□□□ 1.32
PNKP-203ENST00000593946 POTEGQ6S5H5 508 aa23.28■■□□□ 1.32
PNKP-203ENST00000593946 KCTD17Q8N5Z5 321 aa23.28■■□□□ 1.32
PNKP-203ENST00000593946 C7orf25Q9BPX7 421 aa23.28■■□□□ 1.32
PNKP-203ENST00000593946 TUFT1Q9NNX1 390 aa23.28■■□□□ 1.32
PNKP-203ENST00000593946 RPN1P04843 607 aaKnown RBP23.28■■□□□ 1.32
PNKP-203ENST00000593946 IQCB1Q15051 598 aa23.28■■□□□ 1.32
PNKP-203ENST00000593946 EPHA7Q15375 998 aa23.28■■□□□ 1.32
PNKP-203ENST00000593946 LUZP1Q86V48 1076 aa23.28■■□□□ 1.32
PNKP-203ENST00000593946 IFNL1Q8IU54 200 aa23.28■■□□□ 1.32
PNKP-203ENST00000593946 BPIFA3Q9BQP9 254 aa23.28■■□□□ 1.32
PNKP-203ENST00000593946 ZNF236Q9UL36 1845 aa23.27■■□□□ 1.32
PNKP-203ENST00000593946 B4DLN1 442 aa23.27■■□□□ 1.32
PNKP-203ENST00000593946 SPATA31C2B4DYI2 1134 aa23.27■■□□□ 1.32
PNKP-203ENST00000593946 DDX39AO00148 427 aaKnown RBP23.27■■□□□ 1.32
PNKP-203ENST00000593946 KCNA2P16389 499 aa23.27■■□□□ 1.32
PNKP-203ENST00000593946 MUTP22033 750 aa23.27■■□□□ 1.32
PNKP-203ENST00000593946 CYP4A11Q02928 519 aa23.27■■□□□ 1.32
PNKP-203ENST00000593946 ABRAQ8N0Z2 381 aa23.27■■□□□ 1.32
PNKP-203ENST00000593946 RGL1Q9NZL6 768 aa23.27■■□□□ 1.32
PNKP-203ENST00000593946 LOC102724159A0A0B4J2E5 919 aa23.26■■□□□ 1.31
PNKP-203ENST00000593946 E9PMD0 336 aa23.26■■□□□ 1.31
PNKP-203ENST00000593946 KLRC4O43908 158 aa23.26■■□□□ 1.31
PNKP-203ENST00000593946 SLITRK3O94933 977 aa23.26■■□□□ 1.31
PNKP-203ENST00000593946 ICAM3P32942 547 aa23.26■■□□□ 1.31
PNKP-203ENST00000593946 PDE4DQ08499 809 aa23.26■■□□□ 1.31
PNKP-203ENST00000593946 DHX8Q14562 1220 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms