RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 SEPT14Q6ZU15 432 aa10.95□□□□□ -0.66
DDX39A-220ENST00000593008 VSIG10LQ86VR7 867 aa10.95□□□□□ -0.66
DDX39A-220ENST00000593008 FAM177A1Q8N128 213 aaPredicted RBP10.95□□□□□ -0.66
DDX39A-220ENST00000593008 TSEN34Q9BSV6 310 aaKnown RBP10.95□□□□□ -0.66
DDX39A-220ENST00000593008 GLT8D2Q9H1C3 349 aa10.95□□□□□ -0.66
DDX39A-220ENST00000593008 PRDM5Q9NQX1 630 aaPredicted RBP10.95□□□□□ -0.66
DDX39A-220ENST00000593008 STARD7Q9NQZ5 370 aa10.95□□□□□ -0.66
DDX39A-220ENST00000593008 CHMP5Q9NZZ3 219 aa10.95□□□□□ -0.66
DDX39A-220ENST00000593008 UBIAD1Q9Y5Z9 338 aa10.95□□□□□ -0.66
DDX39A-220ENST00000593008 ALPK3Q96L96 1907 aa10.95□□□□□ -0.66
DDX39A-220ENST00000593008 DOCK5Q9H7D0 1870 aa10.95□□□□□ -0.66
DDX39A-220ENST00000593008 B4DLN1 442 aa10.94□□□□□ -0.66
DDX39A-220ENST00000593008 RBAK-RBAKDNI3L0D1 243 aa10.94□□□□□ -0.66
DDX39A-220ENST00000593008 DDX39AO00148 427 aaKnown RBP10.94□□□□□ -0.66
DDX39A-220ENST00000593008 MSH4O15457 936 aa10.94□□□□□ -0.66
DDX39A-220ENST00000593008 CYP3A4P08684 503 aa10.94□□□□□ -0.66
DDX39A-220ENST00000593008 CST5P28325 142 aaPredicted RBP10.94□□□□□ -0.66
DDX39A-220ENST00000593008 MAGEA10P43363 369 aaPredicted RBP10.94□□□□□ -0.66
DDX39A-220ENST00000593008 MDM2Q00987 491 aaPredicted RBP10.94□□□□□ -0.66
DDX39A-220ENST00000593008 SP2Q02086 613 aa10.94□□□□□ -0.66
DDX39A-220ENST00000593008 TLE2Q04725 743 aa10.94□□□□□ -0.66
DDX39A-220ENST00000593008 SF3A1Q15459 793 aaKnown RBP10.94□□□□□ -0.66
DDX39A-220ENST00000593008 IL17AQ16552 155 aa10.94□□□□□ -0.66
DDX39A-220ENST00000593008 DUSP28Q4G0W2 176 aa10.94□□□□□ -0.66
DDX39A-220ENST00000593008 TPRNQ4KMQ1 711 aa10.94□□□□□ -0.66
DDX39A-220ENST00000593008 HABP4Q5JVS0 413 aaKnown RBP10.94□□□□□ -0.66
DDX39A-220ENST00000593008 CXCL17Q6UXB2 119 aa10.94□□□□□ -0.66
DDX39A-220ENST00000593008 BRAPQ7Z569 592 aa10.94□□□□□ -0.66
DDX39A-220ENST00000593008 PCSK9Q8NBP7 692 aaKnown RBP10.94□□□□□ -0.66
DDX39A-220ENST00000593008 OR6J1Q8NGC5 347 aa10.94□□□□□ -0.66
DDX39A-220ENST00000593008 HAS1Q92839 578 aa10.94□□□□□ -0.66
DDX39A-220ENST00000593008 MBOAT7Q96N66 472 aa10.94□□□□□ -0.66
DDX39A-220ENST00000593008 MXRA8Q9BRK3 442 aa10.94□□□□□ -0.66
DDX39A-220ENST00000593008 MAF1Q9H063 256 aa10.94□□□□□ -0.66
DDX39A-220ENST00000593008 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.94□□□□□ -0.66
DDX39A-220ENST00000593008 MAP3K20Q9NYL2 800 aaKnown RBP10.94□□□□□ -0.66
DDX39A-220ENST00000593008 DDX25Q9UHL0 483 aaKnown RBP10.94□□□□□ -0.66
DDX39A-220ENST00000593008 CIZ1Q9ULV3 898 aaPredicted RBP10.94□□□□□ -0.66
DDX39A-220ENST00000593008 LOC102724159A0A0B4J2E5 919 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 RBM47A0AV96 593 aaKnown RBP10.93□□□□□ -0.66
DDX39A-220ENST00000593008 MOXD2PA6NHM9 499 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 FIBPO43427 364 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 TXNP10599 105 aaKnown RBP10.93□□□□□ -0.66
DDX39A-220ENST00000593008 NCLP19338 710 aaKnown RBP10.93□□□□□ -0.66
DDX39A-220ENST00000593008 UBA1P22314 1058 aaKnown RBP10.93□□□□□ -0.66
DDX39A-220ENST00000593008 MARCKSP29966 332 aaPredicted RBP10.93□□□□□ -0.66
DDX39A-220ENST00000593008 CIITAP33076 1130 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 ZNF76P36508 570 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 NUCB2P80303 420 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 SP4Q02446 784 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 SNX17Q15036 470 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 PTPAQ15257 358 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 PWP2Q15269 919 aaKnown RBP10.93□□□□□ -0.66
DDX39A-220ENST00000593008 STXBP2Q15833 593 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 CEP55Q53EZ4 464 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 SH3RF1Q7Z6J0 888 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 PLA2G4DQ86XP0 818 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 C4orf32Q8N8J7 132 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 ETNPPLQ8TBG4 499 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 SCFD2Q8WU76 684 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 GLT1D1Q96MS3 346 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 INPP4AQ96PE3 977 aaPredicted RBP10.93□□□□□ -0.66
DDX39A-220ENST00000593008 AGO4Q9HCK5 861 aaKnown RBP10.93□□□□□ -0.66
DDX39A-220ENST00000593008 JADE2Q9NQC1 790 aa10.93□□□□□ -0.66
DDX39A-220ENST00000593008 NOL7Q9UMY1 257 aaKnown RBP10.93□□□□□ -0.66
DDX39A-220ENST00000593008 TRIOBPQ9H2D6 2365 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 CYP3A7-CYP3A51PA0A087WV96 503 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 TRIM43BA6NCK2 446 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 PP2D1A8MPX8 630 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 MEIS1O00470 390 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 NEMFO60524 1076 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 MYL3P08590 195 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 KCNA2P16389 499 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 CYP3A7P24462 503 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 PSMC6P62333 389 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 MTMR1Q13613 665 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 TTLL4Q14679 1199 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 LY6KQ17RY6 165 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 RILPL1Q5EBL4 403 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 SAMD3Q8N6K7 520 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 PPP1R13LQ8WUF5 828 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 TRIM43Q96BQ3 446 aaPredicted RBP10.92□□□□□ -0.66
DDX39A-220ENST00000593008 IWS1Q96ST2 819 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 PRO3102Q9H379 93 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 ZSCAN16Q9H4T2 348 aaPredicted RBP10.92□□□□□ -0.66
DDX39A-220ENST00000593008 EHMT1Q9H9B1 1298 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 KCNMB3Q9NPA1 279 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 PDLIM7Q9NR12 457 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 KCNH7Q9NS40 1196 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 PRKAG2Q9UGJ0 569 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 Q9Y3F1 56 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 KIAA1217Q5T5P2 1943 aa10.92□□□□□ -0.66
DDX39A-220ENST00000593008 SPATA31C2B4DYI2 1134 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 CHMP2AO43633 222 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 ZEB2O60315 1214 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 EIF3JO75822 258 aaKnown RBP10.91□□□□□ -0.66
DDX39A-220ENST00000593008 CCNE2O96020 404 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 CLTBP09497 229 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 USP11P51784 963 aa10.91□□□□□ -0.66
DDX39A-220ENST00000593008 CHMP4BP1P59074 171 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms