RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 HNRNPUQ00839 825 aaKnown RBP eCLIP11.84□□□□□ -0.51
SMCO4P1-201ENST00000592909 CBX2Q14781 532 aaPredicted RBP11.84□□□□□ -0.51
SMCO4P1-201ENST00000592909 MSLNLQ96KJ4 702 aa11.84□□□□□ -0.51
SMCO4P1-201ENST00000592909 SPATA33Q96N06 139 aa11.84□□□□□ -0.51
SMCO4P1-201ENST00000592909 UBA5Q9GZZ9 404 aa11.84□□□□□ -0.51
SMCO4P1-201ENST00000592909 RC3H2Q9HBD1 1191 aaKnown RBP11.84□□□□□ -0.51
SMCO4P1-201ENST00000592909 PXMP2Q9NR77 195 aa11.84□□□□□ -0.51
SMCO4P1-201ENST00000592909 MRPL11Q9Y3B7 192 aaKnown RBP11.84□□□□□ -0.51
SMCO4P1-201ENST00000592909 H3BRB1 525 aa11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 LINC01565O15544 149 aa11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 RGS20O76081 388 aa11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 FGAP02671 866 aa11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 MMP1P03956 469 aa11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 GOLGA8HP0CJ92 632 aa11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 SMIM10L2AP0DMW4 78 aa11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 SMIM10L2BP0DMW5 78 aa11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 TGFB3P10600 412 aa11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 PCP11498 1178 aaKnown RBP11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 GHRHRQ02643 423 aa11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 FAM26DQ5JW98 314 aa11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 PLVAPQ9BX97 442 aa11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 CPVLQ9H3G5 476 aa11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 RNPEPQ9H4A4 650 aa11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 IGFLR1Q9H665 355 aa11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 TUT1Q9H6E5 874 aaKnown RBP11.83□□□□□ -0.52
SMCO4P1-201ENST00000592909 GGPS1O95749 300 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 CTSHP09668 335 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 HSD17B4P51659 736 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 SP2Q02086 613 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 SIGLEC14Q08ET2 396 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 COASYQ13057 564 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 CAMK1Q14012 370 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 QRICH1Q2TAL8 776 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 VSIG10LQ86VR7 867 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 DGKHQ86XP1 1220 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 ADGRF4Q8IZF3 695 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 SMRP1Q8NCR6 262 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 PPP2R3CQ969Q6 453 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 ZNF689Q96CS4 500 aaPredicted RBP11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 PDCD2LQ9BRP1 358 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 CLEC1BQ9P126 229 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 PLAGL2Q9UPG8 496 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 ADGRA3Q8IWK6 1321 aa11.82□□□□□ -0.52
SMCO4P1-201ENST00000592909 PROB1E7EW31 1015 aa11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 LGALS2P05162 132 aa11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 GNAT1P11488 350 aa11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 UBA1P22314 1058 aaKnown RBP11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 NDUFV1P49821 464 aa11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 NUBP1P53384 320 aa11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 RRP1P56182 461 aaKnown RBP11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 NAALADL2Q58DX5 795 aa11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 STOX1Q6ZVD7 989 aa11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 EFHBQ8N7U6 833 aa11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 P2RX5Q93086 422 aa11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 USP26Q9BXU7 913 aa11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 MLXIPQ9HAP2 919 aa11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 HELLSQ9NRZ9 838 aa11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 FAM86C1Q9NVL1 165 aa11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 MAP3K20Q9NYL2 800 aaKnown RBP11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 ZMYM6O95789 1325 aa11.81□□□□□ -0.52
SMCO4P1-201ENST00000592909 ENPP3O14638 875 aa11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 OPLAHO14841 1288 aa11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 SORBS3O60504 671 aa11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 CFBP00751 764 aa11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 MYCLP12524 364 aaPredicted RBP11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 AVPR2P30518 371 aa11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 VCPP55072 806 aaKnown RBP11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 ADAM17P78536 824 aa11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 BTG3Q14201 252 aaPredicted RBP11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 ASPRV1Q53RT3 343 aa11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 MFSD6Q6ZSS7 791 aa11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 MIER1Q8N108 512 aa11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 SAMD3Q8N6K7 520 aa11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 OTUD7AQ8TE49 926 aaPredicted RBP11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 ATOH1Q92858 354 aaPredicted RBP11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 ASIC4Q96FT7 647 aa11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 PHF7Q9BWX1 381 aaPredicted RBP11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 EHMT1Q9H9B1 1298 aa11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 RIF1Q5UIP0 2472 aaKnown RBP11.8□□□□□ -0.52
SMCO4P1-201ENST00000592909 DGKIO75912 1065 aa11.79□□□□□ -0.52
SMCO4P1-201ENST00000592909 CHRNA1P02708 482 aa11.79□□□□□ -0.52
SMCO4P1-201ENST00000592909 ICAM3P32942 547 aa11.79□□□□□ -0.52
SMCO4P1-201ENST00000592909 NT5C2P49902 561 aa11.79□□□□□ -0.52
SMCO4P1-201ENST00000592909 PGM5Q15124 567 aa11.79□□□□□ -0.52
SMCO4P1-201ENST00000592909 CCDC178Q5BJE1 867 aa11.79□□□□□ -0.52
SMCO4P1-201ENST00000592909 PNMA1Q8ND90 353 aa11.79□□□□□ -0.52
SMCO4P1-201ENST00000592909 SPPL3Q8TCT6 385 aa11.79□□□□□ -0.52
SMCO4P1-201ENST00000592909 ESR2Q92731 530 aa11.79□□□□□ -0.52
SMCO4P1-201ENST00000592909 AMNQ9BXJ7 453 aa11.79□□□□□ -0.52
SMCO4P1-201ENST00000592909 JMJD4Q9H9V9 463 aa11.79□□□□□ -0.52
SMCO4P1-201ENST00000592909 SETD4Q9NVD3 440 aa11.79□□□□□ -0.52
SMCO4P1-201ENST00000592909 USP15Q9Y4E8 981 aaPredicted RBP11.79□□□□□ -0.52
SMCO4P1-201ENST00000592909 USP34Q70CQ2 3546 aa11.79□□□□□ -0.52
SMCO4P1-201ENST00000592909 CCDC171Q6TFL3 1326 aa11.79□□□□□ -0.52
SMCO4P1-201ENST00000592909 TRIOO75962 3097 aa11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 ITGB1P05556 798 aa11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 ATF7P17544 494 aaPredicted RBP11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 MX1P20591 662 aa11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 DNAJB1P25685 340 aa11.78□□□□□ -0.52
SMCO4P1-201ENST00000592909 HAND2P61296 217 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms