RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 FAM20AQ96MK3 541 aa18.35■□□□□ 0.53
PRKCSH-217ENST00000592741 P2RX7Q99572 595 aaKnown RBP18.35■□□□□ 0.53
PRKCSH-217ENST00000592741 RAB21Q9UL25 225 aa18.35■□□□□ 0.53
PRKCSH-217ENST00000592741 NPHP3-ACAD11A0A0J9YXS1 232 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 FRMD3A2A2Y4 597 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 POTEFA5A3E0 1075 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 PPIP5K2O43314 1243 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 USO1O60763 962 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 TFRCP02786 760 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 ATP1A1P05023 1023 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 POTEIP0CG38 1075 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 SPIRE1Q08AE8 756 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 PAPD7Q5XG87 772 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 POTEGQ6S5H5 508 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 POTEEQ6S8J3 1075 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 PURBQ96QR8 312 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 FGFBP2Q9BYJ0 223 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 LACRTQ9GZZ8 138 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 DEF6Q9H4E7 631 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 HERC5Q9UII4 1024 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 SAR1BQ9Y6B6 198 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 RCCD1A6NED2 376 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 ENC1O14682 589 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 ERLIN1O75477 346 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 JAG1P78504 1218 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 CYP27A1Q02318 531 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 CACNB1Q02641 598 aaPredicted RBP18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 ARHGAP27Q6ZUM4 889 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 RRAGAQ7L523 313 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 CACNA2D4Q7Z3S7 1137 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 NELFCDQ8IXH7 590 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 HNRNPLLQ8WVV9 542 aaKnown RBP18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 LENG9Q96B70 501 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 EMILIN3Q9NT22 766 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 ARHGAP20Q9P2F6 1191 aa18.34■□□□□ 0.53
PRKCSH-217ENST00000592741 ANO9A1A5B4 782 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 LRRC53A6NM62 1247 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 SASH3O75995 380 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 TUBBP07437 444 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 PLEKP08567 350 aaPredicted RBP18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 RPA1P27694 616 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 CIITAP33076 1130 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 KIF11P52732 1056 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 TRAF1Q13077 416 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 RRP1BQ14684 758 aaKnown RBP18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 LONRF2Q1L5Z9 754 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 PDXDC1Q6P996 788 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 PPP4R3CPQ6ZMV5 832 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 CATSPER3Q86XQ3 398 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 SCFD1Q8WVM8 642 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 SECISBP2LQ93073 1101 aaKnown RBP18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 ARHGEF10LQ9HCE6 1279 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 ST7Q9NRC1 585 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 DNM3Q9UQ16 869 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 RGPD3A6NKT7 1758 aaPredicted RBP18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 RGPD4Q7Z3J3 1758 aa18.33■□□□□ 0.52
PRKCSH-217ENST00000592741 YDJCA8MPS7 323 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 FAM86B1E9PN63 330 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 FAM86B2P0C5J1 330 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 ERCC3P19447 782 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 EIF4A3P38919 411 aaKnown RBP18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 CKAP4Q07065 602 aaKnown RBP18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 RAD51AP2Q09MP3 1159 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 TERF2Q15554 542 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 BAP1Q92560 729 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 PNKPQ96T60 521 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 IFIH1Q9BYX4 1025 aaKnown RBP18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 ZHX3Q9H4I2 956 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 HDAC6Q9UBN7 1215 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 PRR12Q9ULL5 1215 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 PCDHA13Q9Y5I0 950 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 TNS1Q9HBL0 1735 aaKnown RBP18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 A0A1W2PRG0 241 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 ZNF263O14978 683 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 AKR1B10O60218 316 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 LCA5LO95447 670 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 RHOXF2BP0C7M4 288 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 ZNF76P36508 570 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 MARSP56192 900 aaKnown RBP18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 ARSHQ5FYA8 562 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 RHOXF2Q9BQY4 288 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 KCTD10Q9H3F6 313 aa18.32■□□□□ 0.52
PRKCSH-217ENST00000592741 MACROD2A1Z1Q3 448 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 PIK3CDO00329 1044 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 CYP3A4P08684 503 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 HOXA13P31271 388 aaPredicted RBP18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 STAT2P52630 851 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 KCNMA1Q12791 1236 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 EDRF1Q3B7T1 1238 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 KRT26Q7Z3Y9 468 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 TEX2Q8IWB9 1127 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 ZC3H3Q8IXZ2 948 aaKnown RBP18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 SPICE1Q8N0Z3 855 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 SYT2Q8N9I0 419 aaPredicted RBP18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 SMCR8Q8TEV9 937 aaPredicted RBP18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 FUT8Q9BYC5 575 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 GBP3Q9H0R5 595 aa18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 NUCKS1Q9H1E3 243 aaKnown RBP18.31■□□□□ 0.52
PRKCSH-217ENST00000592741 CEP72Q9P209 647 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms