RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 RPTORQ8N122 1335 aa11.55□□□□□ -0.56
VPS25-206ENST00000591584 UQCRHLA0A096LP55 91 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 SHTN1A0MZ66 631 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 E9PMD0 336 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 MFAP3LO75121 409 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 FLOT1O75955 427 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 UQCRHP07919 91 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 SPATA31C1P0DKV0 1188 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 PTPRAP18433 802 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 PMS1P54277 932 aaKnown RBP11.54□□□□□ -0.56
VPS25-206ENST00000591584 ECM1Q16610 540 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 HERC4Q5GLZ8 1057 aaPredicted RBP11.54□□□□□ -0.56
VPS25-206ENST00000591584 ANGEL2Q5VTE6 544 aaKnown RBP11.54□□□□□ -0.56
VPS25-206ENST00000591584 LRCH2Q5VUJ6 765 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 PCNX4Q63HM2 1172 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 KCNK18Q7Z418 384 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 TMEM139Q8IV31 216 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 RBM46Q8TBY0 533 aaKnown RBP11.54□□□□□ -0.56
VPS25-206ENST00000591584 PPP1R13BQ96KQ4 1090 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 C16orf45Q96MC5 204 aaPredicted RBP11.54□□□□□ -0.56
VPS25-206ENST00000591584 ERGIC2Q96RQ1 377 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 EIF2AK1Q9BQI3 630 aaKnown RBP11.54□□□□□ -0.56
VPS25-206ENST00000591584 ZNF577Q9BSK1 485 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 NOC4LQ9BVI4 516 aaKnown RBP11.54□□□□□ -0.56
VPS25-206ENST00000591584 EDEM3Q9BZQ6 932 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 EMILIN3Q9NT22 766 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 TBC1D22BQ9NU19 505 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 HOXC10Q9NYD6 342 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 TAB2Q9NYJ8 693 aa11.54□□□□□ -0.56
VPS25-206ENST00000591584 A0A1W2PQJ5 194 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 POTEB3A0JP26 581 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 TRIM49BA6NDI0 452 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 POTECB2RU33 542 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 ATP2A1O14983 1001 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 GAS7O60861 476 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 SSBP05455 408 aaKnown RBP eCLIP11.53□□□□□ -0.56
VPS25-206ENST00000591584 CCDC175P0C221 793 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 VCAM1P19320 739 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 MTIF2P46199 727 aaKnown RBP11.53□□□□□ -0.56
VPS25-206ENST00000591584 ADKP55263 362 aaKnown RBP11.53□□□□□ -0.56
VPS25-206ENST00000591584 PPP2R3AQ06190 1150 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 TBC1D8BQ0IIM8 1120 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 SPP2Q13103 211 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 SYCP1Q15431 976 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 MAN2A1Q16706 1144 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 EDRF1Q3B7T1 1238 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 POTEBQ6S5H4 581 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 CYP26C1Q6V0L0 522 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 STXBP4Q6ZWJ1 553 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 CREBRFQ8IUR6 639 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 ZNF397Q8NF99 534 aaPredicted RBP11.53□□□□□ -0.56
VPS25-206ENST00000591584 OR8K1Q8NGG5 319 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 CLEC4DQ8WXI8 215 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 TBC1D5Q92609 795 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 KLRG1Q96E93 195 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 CNOT6LQ96LI5 555 aaKnown RBP11.53□□□□□ -0.56
VPS25-206ENST00000591584 AGBL1Q96MI9 1066 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 TANGO6Q9C0B7 1094 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 SEMA6BQ9H3T3 888 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 RPAP3Q9H6T3 665 aaPredicted RBP11.53□□□□□ -0.56
VPS25-206ENST00000591584 FBXO28Q9NVF7 368 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 TMOD4Q9NZQ9 345 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 SEL1LQ9UBV2 794 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 CAPN11Q9UMQ6 739 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 ADAMTS5Q9UNA0 930 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 LUC7L2Q9Y383 392 aaKnown RBP11.53□□□□□ -0.56
VPS25-206ENST00000591584 COL4A3BPQ9Y5P4 624 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 FRMPD4Q14CM0 1322 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 ZNF541Q9H0D2 1346 aa11.53□□□□□ -0.56
VPS25-206ENST00000591584 MYH7BA7E2Y1 1941 aa11.52□□□□□ -0.56
VPS25-206ENST00000591584 TBCAO75347 108 aaKnown RBP11.52□□□□□ -0.57
VPS25-206ENST00000591584 STAM2O75886 525 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 SLITRK3O94933 977 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 EGFRP00533 1210 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 CASP14P31944 242 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 DSG3P32926 999 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 STAT3P40763 770 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 MARSP56192 900 aaKnown RBP11.52□□□□□ -0.57
VPS25-206ENST00000591584 ETF1P62495 437 aaKnown RBP11.52□□□□□ -0.57
VPS25-206ENST00000591584 MTMR2Q13614 643 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 GIT2Q14161 759 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 COG2Q14746 738 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 VWA3BQ502W6 1294 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 SH3D19Q5HYK7 790 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 B3GNT9Q6UX72 402 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 MTERF4Q7Z6M4 381 aaKnown RBP11.52□□□□□ -0.57
VPS25-206ENST00000591584 RDM1Q8NG50 284 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 WRNIP1Q96S55 665 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 TIPINQ9BVW5 301 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 JADE2Q9NQC1 790 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 ADARB2Q9NS39 739 aaKnown RBP11.52□□□□□ -0.57
VPS25-206ENST00000591584 ZNHIT6Q9NWK9 470 aaKnown RBP11.52□□□□□ -0.57
VPS25-206ENST00000591584 TRMT1Q9NXH9 659 aaKnown RBP11.52□□□□□ -0.57
VPS25-206ENST00000591584 FAM184BQ9ULE4 1060 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 PPP2R2CQ9Y2T4 447 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 PCDHA2Q9Y5H9 948 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 UBIAD1Q9Y5Z9 338 aa11.52□□□□□ -0.57
VPS25-206ENST00000591584 IPO5O00410 1097 aaKnown RBP11.51□□□□□ -0.57
VPS25-206ENST00000591584 VWA5AO00534 786 aa11.51□□□□□ -0.57
VPS25-206ENST00000591584 CETN3O15182 167 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms