RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 CATSPER3Q86XQ3 398 aa12.78□□□□□ -0.36
TUBD1-211ENST00000591548 SMARCE1Q969G3 411 aa12.78□□□□□ -0.36
TUBD1-211ENST00000591548 CDK5RAP3Q96JB5 506 aa12.78□□□□□ -0.36
TUBD1-211ENST00000591548 INPP4AQ96PE3 977 aaPredicted RBP12.78□□□□□ -0.36
TUBD1-211ENST00000591548 IWS1Q96ST2 819 aa12.78□□□□□ -0.36
TUBD1-211ENST00000591548 RIT2Q99578 217 aa12.78□□□□□ -0.36
TUBD1-211ENST00000591548 EFCC1Q9HA90 598 aa12.78□□□□□ -0.36
TUBD1-211ENST00000591548 PKD2L1Q9P0L9 805 aa12.78□□□□□ -0.36
TUBD1-211ENST00000591548 MORF4L1Q9UBU8 362 aa12.78□□□□□ -0.36
TUBD1-211ENST00000591548 DNAJC25-GNG10A0A024R161 153 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 POTEB3A0JP26 581 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 SLC26A4O43511 780 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 ATP9AO75110 1047 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 SMC2O95347 1197 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 PGK2P07205 417 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 RPA1P27694 616 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 ZNF165P49910 485 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 ALDH5A1P51649 535 aaPredicted RBP12.77□□□□□ -0.36
TUBD1-211ENST00000591548 SEMA3FQ13275 785 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 POTEBQ6S5H4 581 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 ERMNQ8TAM6 284 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 FAM200AQ8TCP9 573 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 PARK7Q99497 189 aaKnown RBP12.77□□□□□ -0.36
TUBD1-211ENST00000591548 UNC45AQ9H3U1 944 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 MAGEF1Q9HAY2 307 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 CBX8Q9HC52 389 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 STK17AQ9UEE5 414 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 KIAA1024Q9UPX6 916 aa12.77□□□□□ -0.36
TUBD1-211ENST00000591548 KDM3AQ9Y4C1 1321 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 CHMP2AO43633 222 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 TOMM70O94826 608 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 CAVIN2O95810 425 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 EDNRBP24530 442 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 MORC3Q14149 939 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 MCM6Q14566 821 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 KCTD2Q14681 263 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 HAUS3Q68CZ6 603 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 LARP4BQ92615 738 aaKnown RBP12.77□□□□□ -0.37
TUBD1-211ENST00000591548 RAD54LQ92698 747 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 GPRASP2Q96D09 838 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 FGD4Q96M96 766 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 GSDMAQ96QA5 445 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 MMP19Q99542 508 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 HSD17B14Q9BPX1 270 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 EIF2AK1Q9BQI3 630 aaKnown RBP12.77□□□□□ -0.37
TUBD1-211ENST00000591548 TEKT3Q9BXF9 490 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 NT5C3AQ9H0P0 336 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 STK24Q9Y6E0 443 aa12.77□□□□□ -0.37
TUBD1-211ENST00000591548 POTEFA5A3E0 1075 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 TMEM88BA6NKF7 163 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 E9PMD0 336 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 DDX39AO00148 427 aaKnown RBP12.76□□□□□ -0.37
TUBD1-211ENST00000591548 MAFGO15525 162 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 STAM2O75886 525 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 FCER1AP12319 257 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 CCNA1P78396 465 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 DHX8Q14562 1220 aaKnown RBP12.76□□□□□ -0.37
TUBD1-211ENST00000591548 IQCB1Q15051 598 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 STXBP2Q15833 593 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 WDR78Q5VTH9 848 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 POTEGQ6S5H5 508 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 NLRX1Q86UT6 975 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 LUZP1Q86V48 1076 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 TRIML1Q8N9V2 468 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 POLR3CQ9BUI4 534 aaPredicted RBP12.76□□□□□ -0.37
TUBD1-211ENST00000591548 TRIM9Q9C026 710 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 TBC1D22BQ9NU19 505 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 RGL1Q9NZL6 768 aa12.76□□□□□ -0.37
TUBD1-211ENST00000591548 ADD3Q9UEY8 706 aaKnown RBP12.76□□□□□ -0.37
TUBD1-211ENST00000591548 ABT1Q9ULW3 272 aaKnown RBP12.76□□□□□ -0.37
TUBD1-211ENST00000591548 ADGRA2Q96PE1 1338 aa12.75□□□□□ -0.37
TUBD1-211ENST00000591548 SPATA31C2B4DYI2 1134 aa12.75□□□□□ -0.37
TUBD1-211ENST00000591548 KLRC4O43908 158 aa12.75□□□□□ -0.37
TUBD1-211ENST00000591548 EIF3JO75822 258 aaKnown RBP12.75□□□□□ -0.37
TUBD1-211ENST00000591548 SLITRK3O94933 977 aa12.75□□□□□ -0.37
TUBD1-211ENST00000591548 RPN1P04843 607 aaKnown RBP12.75□□□□□ -0.37
TUBD1-211ENST00000591548 MYL1P05976 194 aa12.75□□□□□ -0.37
TUBD1-211ENST00000591548 PSMC6P62333 389 aa12.75□□□□□ -0.37
TUBD1-211ENST00000591548 CYP4A11Q02928 519 aa12.75□□□□□ -0.37
TUBD1-211ENST00000591548 SV2BQ7L1I2 683 aa12.75□□□□□ -0.37
TUBD1-211ENST00000591548 CCDC102AQ96A19 550 aa12.75□□□□□ -0.37
TUBD1-211ENST00000591548 HHIPL1Q96JK4 782 aa12.75□□□□□ -0.37
TUBD1-211ENST00000591548 C7orf25Q9BPX7 421 aa12.75□□□□□ -0.37
TUBD1-211ENST00000591548 ZCCHC17Q9NP64 241 aaKnown RBP12.75□□□□□ -0.37
TUBD1-211ENST00000591548 MYMKA6NI61 221 aa12.74□□□□□ -0.37
TUBD1-211ENST00000591548 KCNA2P16389 499 aa12.74□□□□□ -0.37
TUBD1-211ENST00000591548 INHBEP58166 350 aa12.74□□□□□ -0.37
TUBD1-211ENST00000591548 AMPD3Q01432 767 aa12.74□□□□□ -0.37
TUBD1-211ENST00000591548 CTTNQ14247 550 aaKnown RBP12.74□□□□□ -0.37
TUBD1-211ENST00000591548 EPHA7Q15375 998 aa12.74□□□□□ -0.37
TUBD1-211ENST00000591548 FAM110CQ1W6H9 321 aa12.74□□□□□ -0.37
TUBD1-211ENST00000591548 UVSSAQ2YD98 709 aa12.74□□□□□ -0.37
TUBD1-211ENST00000591548 IFNL1Q8IU54 200 aa12.74□□□□□ -0.37
TUBD1-211ENST00000591548 DHX40Q8IX18 779 aaKnown RBP12.74□□□□□ -0.37
TUBD1-211ENST00000591548 DYDC2Q96IM9 177 aa12.74□□□□□ -0.37
TUBD1-211ENST00000591548 ZIC5Q96T25 663 aa12.74□□□□□ -0.37
TUBD1-211ENST00000591548 BPIFA3Q9BQP9 254 aa12.74□□□□□ -0.37
TUBD1-211ENST00000591548 NAT10Q9H0A0 1025 aaKnown RBP12.74□□□□□ -0.37
TUBD1-211ENST00000591548 BCAS3Q9H6U6 928 aa12.74□□□□□ -0.37
TUBD1-211ENST00000591548 TUFT1Q9NNX1 390 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms