RNA–Protein interactions for RNA: ENST00000591327.2

GFAP-218, Transcript of glial fibrillary acidic protein, humanhuman

TSL 1 (best)

Gene GFAP, Length 3,255 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-218ENST00000591327 PCDHAC2Q9Y5I4 1007 aa13.46□□□□□ -0.25
GFAP-218ENST00000591327 FAM196BA6NMK8 535 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 HERVK_113P62684 666 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 CDC42EP5Q6NZY7 148 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 SV2BQ7L1I2 683 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 PROM2Q8N271 834 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 CCDC47Q96A33 483 aaKnown RBP13.45□□□□□ -0.26
GFAP-218ENST00000591327 TTYH3Q9C0H2 523 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 USP17L10C9JJH3 530 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 POTEB2H3BUK9 544 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 ERCC3P19447 782 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 TRIM21P19474 475 aaKnown RBP13.45□□□□□ -0.26
GFAP-218ENST00000591327 SEC24CP53992 1094 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 CACNB3P54284 484 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 AMPD3Q01432 767 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 PSMD2Q13200 908 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 ECM1Q16610 540 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 SND1Q7KZF4 910 aaKnown RBP eCLIP13.45□□□□□ -0.26
GFAP-218ENST00000591327 GLIS3Q8NEA6 775 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 NOC4LQ9BVI4 516 aaKnown RBP13.45□□□□□ -0.26
GFAP-218ENST00000591327 PICK1Q9NRD5 415 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 BICDL2A1A5D9 508 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 RAD21O60216 631 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.26
GFAP-218ENST00000591327 CCDC96Q2M329 555 aa13.45□□□□□ -0.26
GFAP-218ENST00000591327 LARP4BQ92615 738 aaKnown RBP13.45□□□□□ -0.26
GFAP-218ENST00000591327 PCMTD1Q96MG8 357 aaPredicted RBP13.45□□□□□ -0.26
GFAP-218ENST00000591327 SRCAPQ6ZRS2 3230 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 PNMA6FA0A0J9YX94 578 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 SYF2O95926 243 aaKnown RBP13.44□□□□□ -0.26
GFAP-218ENST00000591327 SLC27A3Q5K4L6 730 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 CNNM4Q6P4Q7 775 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 SNX29Q8TEQ0 813 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 PARD3BQ8TEW8 1205 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 SPDL1Q96EA4 605 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 CDK5RAP3Q96JB5 506 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 RUFY1Q96T51 708 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 TACO1Q9BSH4 297 aaKnown RBP13.44□□□□□ -0.26
GFAP-218ENST00000591327 LRRC37AA6NMS7 1700 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 hCG_1984214I3L0E3 225 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 HPDP32754 393 aaPredicted RBP13.44□□□□□ -0.26
GFAP-218ENST00000591327 APOBEC3HQ6NTF7 200 aaKnown RBP13.44□□□□□ -0.26
GFAP-218ENST00000591327 ZNF713Q8N859 430 aaPredicted RBP13.44□□□□□ -0.26
GFAP-218ENST00000591327 MICAL1Q8TDZ2 1067 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 RIC8AQ9NPQ8 531 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 IDEP14735 1019 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 SLC7A5Q01650 507 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 LRRC41Q15345 812 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 TMEM266Q2M3C6 531 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 BAIAP2L1Q9UHR4 511 aa13.44□□□□□ -0.26
GFAP-218ENST00000591327 TRPC5Q9UL62 973 aaPredicted RBP13.44□□□□□ -0.26
GFAP-218ENST00000591327 RCCD1A6NED2 376 aa13.43□□□□□ -0.26
GFAP-218ENST00000591327 HGSO14964 777 aaPredicted RBP13.43□□□□□ -0.26
GFAP-218ENST00000591327 ORC2Q13416 577 aaPredicted RBP13.43□□□□□ -0.26
GFAP-218ENST00000591327 RAD54LQ92698 747 aa13.43□□□□□ -0.26
GFAP-218ENST00000591327 HAS1Q92839 578 aa13.43□□□□□ -0.26
GFAP-218ENST00000591327 PPANQ9NQ55 473 aaKnown RBP13.43□□□□□ -0.26
GFAP-218ENST00000591327 GOLGA6BA6NDN3 693 aa13.43□□□□□ -0.26
GFAP-218ENST00000591327 AMPD2Q01433 879 aa13.43□□□□□ -0.26
GFAP-218ENST00000591327 TCP10Q12799 353 aa13.43□□□□□ -0.26
GFAP-218ENST00000591327 MEA1Q16626 185 aa13.43□□□□□ -0.26
GFAP-218ENST00000591327 TSR1Q2NL82 804 aaKnown RBP13.43□□□□□ -0.26
GFAP-218ENST00000591327 CENPPQ6IPU0 288 aa13.43□□□□□ -0.26
GFAP-218ENST00000591327 UNC13DQ70J99 1090 aa13.43□□□□□ -0.26
GFAP-218ENST00000591327 YIPF3Q9GZM5 350 aa13.43□□□□□ -0.26
GFAP-218ENST00000591327 DNAJC18Q9H819 358 aa13.43□□□□□ -0.26
GFAP-218ENST00000591327 DBNDD1Q9H9R9 158 aa13.43□□□□□ -0.26
GFAP-218ENST00000591327 SH3BP1Q9Y3L3 701 aa13.43□□□□□ -0.26
GFAP-218ENST00000591327 ANKRD31Q8N7Z5 1873 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 EPHB6O15197 1021 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 MYBL2P10244 700 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 CLK2P49760 499 aaKnown RBP13.42□□□□□ -0.26
GFAP-218ENST00000591327 GUCY1A3Q02108 690 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 APBA1Q02410 837 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 SF3B2Q13435 895 aaKnown RBP13.42□□□□□ -0.26
GFAP-218ENST00000591327 CCDC181Q5TID7 509 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 AP1ARQ63HQ0 302 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 DDX12PQ92771 950 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 FAXDC2Q96IV6 333 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 NHEJ1Q9H9Q4 299 aaPredicted RBP13.42□□□□□ -0.26
GFAP-218ENST00000591327 DDX25Q9UHL0 483 aaKnown RBP13.42□□□□□ -0.26
GFAP-218ENST00000591327 MYO6Q9UM54 1294 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 USP17L15C9J2P7 530 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 USP17L13C9JLJ4 530 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 USP17L11C9JVI0 530 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 USP17L18D6R9N7 530 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 USP17L22D6RA61 530 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 USP17L17D6RBQ6 530 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 USP17L19D6RCP7 530 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 USP17L20D6RJB6 530 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 PLEKP08567 350 aaPredicted RBP13.42□□□□□ -0.26
GFAP-218ENST00000591327 CALRP27797 417 aaKnown RBP13.42□□□□□ -0.26
GFAP-218ENST00000591327 CYP27A1Q02318 531 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 USP17L24Q0WX57 530 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 CCDC122Q5T0U0 273 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 KRT79Q5XKE5 535 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 USP17L6PQ6QN14 398 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 MAEAQ7L5Y9 396 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 FAM114A1Q8IWE2 563 aa13.42□□□□□ -0.26
GFAP-218ENST00000591327 ZSCAN29Q8IWY8 852 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms