RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, human

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-223	ENST00000591239	ZNF286B	P0CG31	522 aa		10.5	□□□□□ -0.73
DNMT1-223	ENST00000591239	ARHGAP4	P98171	946 aa		10.5	□□□□□ -0.73
DNMT1-223	ENST00000591239	MTMR1	Q13613	665 aa		10.5	□□□□□ -0.73
DNMT1-223	ENST00000591239	ME3	Q16798	604 aa		10.5	□□□□□ -0.73
DNMT1-223	ENST00000591239	CEP55	Q53EZ4	464 aa		10.5	□□□□□ -0.73
DNMT1-223	ENST00000591239	METTL7B	Q6UX53	244 aa		10.5	□□□□□ -0.73
DNMT1-223	ENST00000591239	TDH	Q8IZJ6	230 aa		10.5	□□□□□ -0.73
DNMT1-223	ENST00000591239	GIMAP8	Q8ND71	665 aa	Predicted RBP	10.5	□□□□□ -0.73
DNMT1-223	ENST00000591239	CYP2W1	Q8TAV3	490 aa		10.5	□□□□□ -0.73
DNMT1-223	ENST00000591239	MXRA8	Q9BRK3	442 aa		10.5	□□□□□ -0.73
DNMT1-223	ENST00000591239	KATNAL1	Q9BW62	490 aa		10.5	□□□□□ -0.73
DNMT1-223	ENST00000591239	JADE2	Q9NQC1	790 aa		10.5	□□□□□ -0.73
DNMT1-223	ENST00000591239	TRMT13	Q9NUP7	481 aa	Known RBP	10.5	□□□□□ -0.73
DNMT1-223	ENST00000591239	HAS3	O00219	553 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	F2	P00734	622 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	KCNA2	P16389	499 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	ZNF76	P36508	570 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	PSEN2	P49810	448 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	FXR1	P51114	621 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	NLRP5	P59047	1200 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	FPGS	Q05932	587 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	PTPN11	Q06124	597 aa	Predicted RBP	10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	MFSD10	Q14728	455 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	KIAA0753	Q2KHM9	967 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	MFSD5	Q6N075	450 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	NECAB1	Q8N987	351 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	RASGRP4	Q8TDF6	673 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	CRYGN	Q8WXF5	182 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	AIFM3	Q96NN9	605 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	KIF2C	Q99661	725 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	GPR20	Q99678	358 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	C16orf70	Q9BSU1	422 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	C22orf23	Q9BZE7	217 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	PPP1R12C	Q9BZL4	782 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	HIPK3	Q9H422	1215 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239	KCNH7	Q9NS40	1196 aa		10.49	□□□□□ -0.73
DNMT1-223	ENST00000591239		H3BRB1	525 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	MEIS1	O00470	390 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	DTNB	O60941	627 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	LARGE1	O95461	756 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	CTDNEP1	O95476	244 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	CYP3A4	P08684	503 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	AR	P10275	920 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	CYP2C9	P11712	490 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	CYP2C18	P33260	490 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	RBM25	P49756	843 aa	Known RBP	10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	SP4	Q02446	784 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	NIPA1	Q7RTP0	329 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	SESTD1	Q86VW0	696 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	FAM177A1	Q8N128	213 aa	Predicted RBP	10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	C7orf31	Q8N865	590 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	GTF3C6	Q969F1	213 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	ALG1	Q9BT22	464 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	NOC4L	Q9BVI4	516 aa	Known RBP	10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	TUT1	Q9H6E5	874 aa	Known RBP	10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	PKD2L1	Q9P0L9	805 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	TELO2	Q9Y4R8	837 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	STK36	Q9NRP7	1315 aa		10.48	□□□□□ -0.73
DNMT1-223	ENST00000591239	DOCK5	Q9H7D0	1870 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	FAM86B1	E9PN63	330 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	LGALS2	P05162	132 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	FAM86B2	P0C5J1	330 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	CSF2RA	P15509	400 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	EPHB4	P54760	987 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	SHH	Q15465	462 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	PTGIS	Q16647	500 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	LRIT3	Q3SXY7	679 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	GALNT17	Q6IS24	598 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	GDF6	Q6KF10	455 aa	Predicted RBP	10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	BLID	Q8IZY5	108 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	TMEM199	Q8N511	208 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	AGO4	Q9HCK5	861 aa	Known RBP	10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	ORC3	Q9UBD5	711 aa	Predicted RBP	10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	HDAC6	Q9UBN7	1215 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	GTF2IRD1	Q9UHL9	959 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	PCDHA4	Q9UN74	947 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	LIMCH1	Q9UPQ0	1083 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	NOD1	Q9Y239	953 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	UMODL1	Q5DID0	1318 aa		10.47	□□□□□ -0.73
DNMT1-223	ENST00000591239	IGLV3-22	A0A075B6J6	115 aa		10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	GSTTP1	A0A1W2PQM5	241 aa		10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239		M0R2N6	131 aa		10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	XBP1	P17861	261 aa		10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	TCF7	P36402	384 aa	Predicted RBP	10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	CCL23	P55773	120 aa		10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	ITGB3BP	Q13352	177 aa	Predicted RBP	10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	PPIG	Q13427	754 aa	Known RBP eCLIP	10.46	□□□□□ -0.73	2e-14	■□□□□ 10.5
DNMT1-223	ENST00000591239	NPY5R	Q15761	445 aa		10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	C9orf50	Q5SZB4	431 aa		10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	UTP14C	Q5TAP6	766 aa	Known RBP	10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	PLA2G4D	Q86XP0	818 aa		10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	TRIM50	Q86XT4	487 aa		10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	DAGLB	Q8NCG7	672 aa		10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	NSUN7	Q8NE18	718 aa	Known RBP	10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	SEPT1	Q8WYJ6	367 aa		10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	WASF1	Q92558	559 aa		10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	CTAGE1	Q96RT6	745 aa		10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	SDF4	Q9BRK5	362 aa		10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	PHF20	Q9BVI0	1012 aa		10.46	□□□□□ -0.73
DNMT1-223	ENST00000591239	UPF2	Q9HAU5	1272 aa	Known RBP	10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 61 ms