RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ERVK-24P63145 666 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 GLE1Q53GS7 698 aaKnown RBP18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 FAM83BQ5T0W9 1011 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 FAM102BQ5T8I3 360 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 GKAP1Q5VSY0 366 aaPredicted RBP18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 IFT74Q96LB3 600 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 TMEM60Q9H2L4 133 aa18.69■□□□□ 0.58
SMARCA4-215ENST00000590574 A0A087WUV0 522 aaPredicted RBP18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 GAP43P17677 238 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 KLK7P49862 253 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 SEMA3FQ13275 785 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 ALKBH5Q6P6C2 394 aaKnown RBP18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 ANKRD42Q8N9B4 389 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 TFR2Q9UP52 801 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 LRRN2O75325 713 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 FGFR2P21802 821 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 GUF1Q8N442 669 aaKnown RBP18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 NOA1Q8NC60 698 aaKnown RBP18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 FBF1Q8TES7 1133 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 SUGCTQ9HAC7 445 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 ATP8A1Q9Y2Q0 1164 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 CEP83Q9Y592 693 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 STK4Q13043 487 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 SBK1Q52WX2 424 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 PPP4R3CPQ6ZMV5 832 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 PPM1KQ8N3J5 372 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 KANSL2Q9H9L4 492 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 H0YIN7 160 aa18.68■□□□□ 0.58
SMARCA4-215ENST00000590574 AKAP12Q02952 1782 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 N4BP1O75113 896 aaKnown RBP18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 ZBTB16Q05516 673 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 CCDC6Q16204 474 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 TRIM65Q6PJ69 517 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 CD209Q9NNX6 404 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 MRPL11Q9Y3B7 192 aaKnown RBP18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 ESYT3A0FGR9 886 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 ZNF18P17022 549 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 LACTBP83111 547 aaPredicted RBP18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 DHX9Q08211 1270 aaKnown RBP18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 PDCLQ13371 301 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 TCP10L2B9ZVM9 353 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 MESDQ14696 234 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 PPP1R14CQ8TAE6 165 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 TRIM7Q9C029 511 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 USP17L15C9J2P7 530 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 USP17L13C9JLJ4 530 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 USP17L11C9JVI0 530 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 USP17L18D6R9N7 530 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 USP17L22D6RA61 530 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 USP17L17D6RBQ6 530 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 USP17L19D6RCP7 530 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 USP17L20D6RJB6 530 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 ZBTB5O15062 677 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 USP17L24Q0WX57 530 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 STRN3Q13033 797 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 ORC2Q13416 577 aaPredicted RBP18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 USP17L6PQ6QN14 398 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 GIMAP8Q8ND71 665 aaPredicted RBP18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 PNKPQ96T60 521 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 PTPN22Q9Y2R2 807 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 UBR1Q8IWV7 1749 aa18.67■□□□□ 0.58
SMARCA4-215ENST00000590574 POTEB3A0JP26 581 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 POTECB2RU33 542 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 POTEBQ6S5H4 581 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 NSMFQ6X4W1 530 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 LRRC1Q9BTT6 524 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 AGTPBP1Q9UPW5 1226 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 ARHGAP23Q9P227 1491 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 SF3B3Q15393 1217 aaKnown RBP18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 PDXDC1Q6P996 788 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 CEP63Q96MT8 703 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 BHMT2Q9H2M3 363 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 FAM217BQ9NTX9 383 aaPredicted RBP18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 LARSQ9P2J5 1176 aaKnown RBP18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 SNX12Q9UMY4 172 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 PACSIN2Q9UNF0 486 aaPredicted RBP18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 PLAAQ9Y263 795 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 SFI1A8K8P3 1242 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 USP17L10C9JJH3 530 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 STXBP3O00186 592 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 PSMD14O00487 310 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 HOXA13P31271 388 aaPredicted RBP18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 ADGRA1Q86SQ6 560 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 SPATA4Q8NEY3 305 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 CCDC127Q96BQ5 260 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 RSRC1Q96IZ7 334 aaKnown RBP18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 C7orf25Q9BPX7 421 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 DAAM1Q9Y4D1 1078 aa18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 PDS5AQ29RF7 1337 aaKnown RBP18.66■□□□□ 0.58
SMARCA4-215ENST00000590574 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 PLTPP55058 493 aa18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 KCNH2Q12809 1159 aa18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 UAP1Q16222 522 aaPredicted RBP18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 BUB1BO60566 1050 aaPredicted RBP18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 GAS8O95995 478 aa18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 PDE6BP35913 854 aa18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 NEDD1Q8NHV4 660 aa18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 MAGOHBQ96A72 148 aaKnown RBP18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 SPZ1Q9BXG8 430 aa18.65■□□□□ 0.58
SMARCA4-215ENST00000590574 PDE6CP51160 858 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms