RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 ZDHHC15Q96MV8 337 aa12.18□□□□□ -0.46
GFAP-216ENST00000589701 CSRNP1Q96S65 589 aa12.18□□□□□ -0.46
GFAP-216ENST00000589701 SFI1A8K8P3 1242 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 FAM86B1E9PN63 330 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 NDUFB10O96000 172 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 FAM86B2P0C5J1 330 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 CLK2P49760 499 aaKnown RBP12.17□□□□□ -0.46
GFAP-216ENST00000589701 TMTC1Q8IUR5 882 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 PI4KBQ9UBF8 816 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 ITIH6Q6UXX5 1313 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 LRRC37AA6NMS7 1700 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 ESYT2A0FGR8 921 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 MEIS2O14770 477 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 ZNF185O15231 689 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 POLR3GO15318 223 aaPredicted RBP12.17□□□□□ -0.46
GFAP-216ENST00000589701 MED24O75448 989 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 CASP5P51878 434 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 MRPL12P52815 198 aaKnown RBP12.17□□□□□ -0.46
GFAP-216ENST00000589701 ARID5AQ03989 594 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 PABPC4Q13310 644 aaKnown RBP eCLIP12.17□□□□□ -0.46
GFAP-216ENST00000589701 PODNQ7Z5L7 613 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 NOA1Q8NC60 698 aaKnown RBP12.17□□□□□ -0.46
GFAP-216ENST00000589701 ANO3Q9BYT9 981 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 THAP9Q9H5L6 903 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 NLRC4Q9NPP4 1024 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 RPS6KL1Q9Y6S9 549 aa12.17□□□□□ -0.46
GFAP-216ENST00000589701 NRXN2Q9P2S2 1712 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 SHTN1A0MZ66 631 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 EFCAB8A8MWE9 144 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 ZNF263O14978 683 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 PPIP5K2O43314 1243 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 CHMP2AO43633 222 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 ZMYND10O75800 440 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 PNMA6AP0CW24 399 aaPredicted RBP12.16□□□□□ -0.46
GFAP-216ENST00000589701 EEF1GP26641 437 aaKnown RBP12.16□□□□□ -0.46
GFAP-216ENST00000589701 FXR2P51116 673 aaKnown RBP eCLIP12.16□□□□□ -0.46
GFAP-216ENST00000589701 ABCB5Q2M3G0 1257 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 CCDC122Q5T0U0 273 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 CCDC174Q6PII3 467 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 KRT222Q8N1A0 295 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 DHTKD1Q96HY7 919 aaPredicted RBP12.16□□□□□ -0.46
GFAP-216ENST00000589701 GDAP1L1Q96MZ0 367 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 PNKPQ96T60 521 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 GLIS2Q9BZE0 524 aaPredicted RBP12.16□□□□□ -0.46
GFAP-216ENST00000589701 ZNF277Q9NRM2 450 aaPredicted RBP12.16□□□□□ -0.46
GFAP-216ENST00000589701 SWAP70Q9UH65 585 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 PPP1R12AO14974 1030 aaPredicted RBP12.16□□□□□ -0.46
GFAP-216ENST00000589701 ATP1A1P05023 1023 aaKnown RBP12.16□□□□□ -0.46
GFAP-216ENST00000589701 YBX3P16989 372 aaKnown RBP eCLIP12.16□□□□□ -0.46
GFAP-216ENST00000589701 DNA2P51530 1060 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 CHMP4BP1P59074 171 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 CNNM4Q6P4Q7 775 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 DNAJC19Q96DA6 116 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 NAA15Q9BXJ9 866 aaKnown RBP12.16□□□□□ -0.46
GFAP-216ENST00000589701 NHEJ1Q9H9Q4 299 aaPredicted RBP12.16□□□□□ -0.46
GFAP-216ENST00000589701 PLIN4Q96Q06 1357 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 ARFGEF1Q9Y6D6 1849 aa12.16□□□□□ -0.46
GFAP-216ENST00000589701 CTAGE9A4FU28 777 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 RSPH10B2B2RC85 870 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 SIPA1L1O43166 1804 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 RSPH10BP0C881 870 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 DNM2P50570 870 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 GSCP56915 257 aaPredicted RBP12.15□□□□□ -0.46
GFAP-216ENST00000589701 AMPD3Q01432 767 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 COASYQ13057 564 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 GPATCH4Q5T3I0 446 aaKnown RBP12.15□□□□□ -0.46
GFAP-216ENST00000589701 ITFG2Q969R8 447 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 VEZTQ9HBM0 779 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 PANK4Q9NVE7 773 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 RGL1Q9NZL6 768 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 CAPN11Q9UMQ6 739 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 GOLGA6L9A6NEM1 432 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 TRAF5O00463 557 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 OPLAHO14841 1288 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 KCNA1Q09470 495 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 MAP9Q49MG5 647 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 HERC4Q5GLZ8 1057 aaPredicted RBP12.15□□□□□ -0.46
GFAP-216ENST00000589701 STRIP1Q5VSL9 837 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 CENPPQ6IPU0 288 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 UNC13DQ70J99 1090 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 KIAA1328Q86T90 577 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 GPBP1Q86WP2 473 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 TTYH3Q9C0H2 523 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 NDST4Q9H3R1 872 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 FBXO28Q9NVF7 368 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 SMARCAL1Q9NZC9 954 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 PKD2L1Q9P0L9 805 aa12.15□□□□□ -0.46
GFAP-216ENST00000589701 CFBP00751 764 aa12.14□□□□□ -0.47
GFAP-216ENST00000589701 SMARCA1P28370 1054 aa12.14□□□□□ -0.47
GFAP-216ENST00000589701 ARHGAP4P98171 946 aa12.14□□□□□ -0.47
GFAP-216ENST00000589701 CC2D2BQ6DHV5 1058 aa12.14□□□□□ -0.47
GFAP-216ENST00000589701 TMCO3Q6UWJ1 677 aa12.14□□□□□ -0.47
GFAP-216ENST00000589701 RSRC2Q7L4I2 434 aaKnown RBP12.14□□□□□ -0.47
GFAP-216ENST00000589701 RRAGAQ7L523 313 aa12.14□□□□□ -0.47
GFAP-216ENST00000589701 KSR1Q8IVT5 923 aa12.14□□□□□ -0.47
GFAP-216ENST00000589701 PIGOQ8TEQ8 1089 aa12.14□□□□□ -0.47
GFAP-216ENST00000589701 CCDC47Q96A33 483 aaKnown RBP12.14□□□□□ -0.47
GFAP-216ENST00000589701 DNAJC7Q99615 494 aa12.14□□□□□ -0.47
GFAP-216ENST00000589701 PLEKHA4Q9H4M7 779 aa12.14□□□□□ -0.47
GFAP-216ENST00000589701 KRT18P05783 430 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms