RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	RMND1	Q9NWS8	449 aa		17.19	■□□□□ 0.34
DDX39A-209	ENST00000589318	KDM3A	Q9Y4C1	1321 aa		17.18	■□□□□ 0.34
DDX39A-209	ENST00000589318	SLC26A4	O43511	780 aa		17.18	■□□□□ 0.34
DDX39A-209	ENST00000589318	MED24	O75448	989 aa		17.18	■□□□□ 0.34
DDX39A-209	ENST00000589318	PSMD10	O75832	226 aa		17.18	■□□□□ 0.34
DDX39A-209	ENST00000589318	RHOBTB3	O94955	611 aa		17.18	■□□□□ 0.34
DDX39A-209	ENST00000589318	ATP1A3	P13637	1013 aa		17.18	■□□□□ 0.34
DDX39A-209	ENST00000589318	CCT6A	P40227	531 aa	Known RBP	17.18	■□□□□ 0.34
DDX39A-209	ENST00000589318	TRMT44	Q8IYL2	757 aa	Known RBP	17.18	■□□□□ 0.34
DDX39A-209	ENST00000589318	SLC5A5	Q92911	643 aa		17.18	■□□□□ 0.34
DDX39A-209	ENST00000589318	CDK5RAP3	Q96JB5	506 aa		17.18	■□□□□ 0.34
DDX39A-209	ENST00000589318	TAAR1	Q96RJ0	339 aa		17.18	■□□□□ 0.34
DDX39A-209	ENST00000589318	HOXC10	Q9NYD6	342 aa		17.18	■□□□□ 0.34
DDX39A-209	ENST00000589318	FEZ2	Q9UHY8	353 aa	Predicted RBP	17.18	■□□□□ 0.34
DDX39A-209	ENST00000589318	ZNF215	Q9UL58	517 aa	Predicted RBP	17.18	■□□□□ 0.34
DDX39A-209	ENST00000589318	KCNH4	Q9UQ05	1017 aa		17.18	■□□□□ 0.34
DDX39A-209	ENST00000589318	RABGAP1	Q9Y3P9	1069 aa		17.18	■□□□□ 0.34
DDX39A-209	ENST00000589318	POTEB3	A0JP26	581 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	MYMK	A6NI61	221 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	AR	P10275	920 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	H2AFX	P16104	143 aa	Predicted RBP	17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	ITGB5	P18084	799 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	POTEB	Q6S5H4	581 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	SV2B	Q7L1I2	683 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	MRFAP1L1	Q96HT8	127 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	FANCL	Q9NW38	375 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	GDA	Q9Y2T3	454 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318		V9GYY5	206 aa	Predicted RBP	17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	CXCL11	O14625	94 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	SPATA31C1	P0DKV0	1188 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	HOXA7	P31268	230 aa	Predicted RBP	17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	MRPS9	P82933	396 aa	Known RBP	17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	GPS2	Q13227	327 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	SEMA3F	Q13275	785 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	TTLL12	Q14166	644 aa	Predicted RBP	17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	LDLRAD1	Q5T700	205 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	PCNX4	Q63HM2	1172 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	NCAPH2	Q6IBW4	605 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	RNF207	Q6ZRF8	634 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	PROCA1	Q8NCQ7	364 aa	Predicted RBP	17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	PURB	Q96QR8	312 aa	Known RBP	17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	MXRA8	Q9BRK3	442 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	TEX13B	Q9BXU2	312 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	NT5C3A	Q9H0P0	336 aa		17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	ARGLU1	Q9NWB6	273 aa	Predicted RBP	17.17	■□□□□ 0.34
DDX39A-209	ENST00000589318	ERICH4	A6NGS2	130 aa		17.16	■□□□□ 0.34
DDX39A-209	ENST00000589318	EML1	O00423	815 aa		17.16	■□□□□ 0.34
DDX39A-209	ENST00000589318	ZNF18	P17022	549 aa		17.16	■□□□□ 0.34
DDX39A-209	ENST00000589318	SET	Q01105	290 aa	Predicted RBP	17.16	■□□□□ 0.34
DDX39A-209	ENST00000589318	AMPD3	Q01432	767 aa		17.16	■□□□□ 0.34
DDX39A-209	ENST00000589318	PPIL2	Q13356	520 aa		17.16	■□□□□ 0.34
DDX39A-209	ENST00000589318	MOGS	Q13724	837 aa		17.16	■□□□□ 0.34
DDX39A-209	ENST00000589318	CNNM4	Q6P4Q7	775 aa		17.16	■□□□□ 0.34
DDX39A-209	ENST00000589318	B3GNT9	Q6UX72	402 aa		17.16	■□□□□ 0.34
DDX39A-209	ENST00000589318	NSMF	Q6X4W1	530 aa		17.16	■□□□□ 0.34
DDX39A-209	ENST00000589318	OTOP1	Q7RTM1	612 aa		17.16	■□□□□ 0.34
DDX39A-209	ENST00000589318	CATSPER3	Q86XQ3	398 aa		17.16	■□□□□ 0.34
DDX39A-209	ENST00000589318	CWC15	Q9P013	229 aa	Known RBP	17.16	■□□□□ 0.34
DDX39A-209	ENST00000589318	KIAA1024	Q9UPX6	916 aa		17.16	■□□□□ 0.34
DDX39A-209	ENST00000589318	NFE2L3	Q9Y4A8	694 aa		17.16	■□□□□ 0.34
DDX39A-209	ENST00000589318	TRAF5	O00463	557 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	BCR	P11274	1271 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	RPA1	P27694	616 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	HNRNPH2	P55795	449 aa	Known RBP	17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	LRMP	Q12912	555 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	BAAT	Q14032	418 aa	Predicted RBP	17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	PGM5	Q15124	567 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	MAP1S	Q66K74	1059 aa	Predicted RBP	17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	HAUS3	Q68CZ6	603 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	KLHL10	Q6JEL2	608 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	LBX2	Q6XYB7	198 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	LRRC8A	Q8IWT6	810 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	PXMP2	Q9NR77	195 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	UBIAD1	Q9Y5Z9	338 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	POTEF	A5A3E0	1075 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318		E9PMD0	336 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	TPM1	P09493	284 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	EIF2AK2	P19525	551 aa	Known RBP	17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	PRCP	P42785	496 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	ASIC1	P78348	528 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	PPP2R5C	Q13362	524 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	LRCH2	Q5VUJ6	765 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	POTEG	Q6S5H5	508 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	GADL1	Q6ZQY3	521 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	NIPA1	Q7RTP0	329 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	ARMC9	Q7Z3E5	817 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	GIMAP8	Q8ND71	665 aa	Predicted RBP	17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	CACTIN	Q8WUQ7	758 aa	Known RBP	17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	OPTN	Q96CV9	577 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	PDCD2L	Q9BRP1	358 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	L2HGDH	Q9H9P8	463 aa		17.15	■□□□□ 0.34
DDX39A-209	ENST00000589318	SYNRG	Q9UMZ2	1314 aa		17.14	■□□□□ 0.34
DDX39A-209	ENST00000589318	PEX10	O60683	326 aa		17.14	■□□□□ 0.33
DDX39A-209	ENST00000589318	GJA5	P36382	358 aa		17.14	■□□□□ 0.33
DDX39A-209	ENST00000589318	FANCC	Q00597	558 aa		17.14	■□□□□ 0.33
DDX39A-209	ENST00000589318	TKFC	Q3LXA3	575 aa		17.14	■□□□□ 0.33
DDX39A-209	ENST00000589318	FILIP1	Q7Z7B0	1213 aa		17.14	■□□□□ 0.33
DDX39A-209	ENST00000589318	ADSSL1	Q8N142	457 aa		17.14	■□□□□ 0.33
DDX39A-209	ENST00000589318	ERMN	Q8TAM6	284 aa		17.14	■□□□□ 0.33

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms