RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 GJD2Q9UKL4 321 aa16.32■□□□□ 0.2
NPC1-207ENST00000588867 DHX15O43143 795 aaKnown RBP16.31■□□□□ 0.2
NPC1-207ENST00000588867 SORBS3O60504 671 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 RGS2P41220 211 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 SPIRE1Q08AE8 756 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 SNX29Q8TEQ0 813 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 SOCS4Q8WXH5 440 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 DHX58Q96C10 678 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 SDF4Q9BRK5 362 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 DDX19AQ9NUU7 478 aaKnown RBP16.31■□□□□ 0.2
NPC1-207ENST00000588867 A0A087X0B3 334 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 ICAM3P32942 547 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 PPP2R5CQ13362 524 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 LONRF3Q496Y0 759 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 USP6NLQ92738 828 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 CALML4Q96GE6 196 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 CDK5RAP3Q96JB5 506 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 TINF2Q9BSI4 451 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 MMTAG2Q9BU76 263 aaKnown RBP16.31■□□□□ 0.2
NPC1-207ENST00000588867 UNC45AQ9H3U1 944 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.31■□□□□ 0.2
NPC1-207ENST00000588867 TCEAL9Q9UHQ7 104 aa16.31■□□□□ 0.2
NPC1-207ENST00000588867 ZSWIM8A7E2V4 1837 aa16.3■□□□□ 0.2
NPC1-207ENST00000588867 ZNF236Q9UL36 1845 aa16.3■□□□□ 0.2
NPC1-207ENST00000588867 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.3■□□□□ 0.2
NPC1-207ENST00000588867 GPR25O00155 361 aa16.3■□□□□ 0.2
NPC1-207ENST00000588867 EML1O00423 815 aa16.3■□□□□ 0.2
NPC1-207ENST00000588867 KCNA2P16389 499 aa16.3■□□□□ 0.2
NPC1-207ENST00000588867 CCT6AP40227 531 aaKnown RBP16.3■□□□□ 0.2
NPC1-207ENST00000588867 SP2Q02086 613 aa16.3■□□□□ 0.2
NPC1-207ENST00000588867 MAMDC4Q6UXC1 1216 aa16.3■□□□□ 0.2
NPC1-207ENST00000588867 ERMNQ8TAM6 284 aa16.3■□□□□ 0.2
NPC1-207ENST00000588867 BEGAINQ9BUH8 593 aa16.3■□□□□ 0.2
NPC1-207ENST00000588867 NUP62CLQ9H1M0 184 aa16.3■□□□□ 0.2
NPC1-207ENST00000588867 BCAS3Q9H6U6 928 aa16.3■□□□□ 0.2
NPC1-207ENST00000588867 SERTAD1Q9UHV2 236 aa16.3■□□□□ 0.2
NPC1-207ENST00000588867 SAMM50Q9Y512 469 aa16.3■□□□□ 0.2
NPC1-207ENST00000588867 SNAI1O95863 264 aaPredicted RBP16.29■□□□□ 0.2
NPC1-207ENST00000588867 HOXC6P09630 235 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 CCDC183Q5T5S1 534 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 RRAGBQ5VZM2 374 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 IQUBQ8NA54 791 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 CNNM3Q8NE01 707 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 TNMDQ9H2S6 317 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 PDGFCQ9NRA1 345 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 GABRQQ9UN88 632 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 TGFB3P10600 412 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 STAT6P42226 847 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 SP4Q02446 784 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 MAP2K1Q02750 393 aaPredicted RBP16.29■□□□□ 0.2
NPC1-207ENST00000588867 CCL14Q16627 93 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 LY6KQ17RY6 165 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 MIER3Q7Z3K6 550 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 CD99L2Q8TCZ2 262 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 APBA2Q99767 749 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 DISC1Q9NRI5 854 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 FLRT1Q9NZU1 646 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 LRRC37A2A6NM11 1700 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 THSD7BQ9C0I4 1608 aa16.29■□□□□ 0.2
NPC1-207ENST00000588867 DOCK5Q9H7D0 1870 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 FLT3LGP49771 235 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 CYP4A11Q02928 519 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 HAUS3Q68CZ6 603 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 KCNV1Q6PIU1 500 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 KRBA2Q6ZNG9 492 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 CYFIP1Q7L576 1253 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 CEP57L1Q8IYX8 460 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 MSL3Q8N5Y2 521 aaKnown RBP16.28■□□□□ 0.2
NPC1-207ENST00000588867 TIGD1Q96MW7 591 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 EIF2AK1Q9BQI3 630 aaKnown RBP16.28■□□□□ 0.2
NPC1-207ENST00000588867 PYM1Q9BRP8 204 aaKnown RBP16.28■□□□□ 0.2
NPC1-207ENST00000588867 CLSTN2Q9H4D0 955 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 VTA1Q9NP79 307 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 SAGE1Q9NXZ1 904 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 TSKSQ9UJT2 592 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 STK24Q9Y6E0 443 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 SYNGAP1Q96PV0 1343 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 MED24O75448 989 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 ARIH2O95376 493 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 TXNP10599 105 aaKnown RBP16.28■□□□□ 0.2
NPC1-207ENST00000588867 PLCG1P19174 1290 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 UBA1P22314 1058 aaKnown RBP16.28■□□□□ 0.2
NPC1-207ENST00000588867 CAP1Q01518 475 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 KRT76Q01546 638 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 B3GNT9Q6UX72 402 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 SCFD2Q8WU76 684 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 SENP7Q9BQF6 1050 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 ABHD16BQ9H3Z7 469 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 JPH1Q9HDC5 661 aaPredicted RBP16.28■□□□□ 0.2
NPC1-207ENST00000588867 RGL1Q9NZL6 768 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 SLC9A2Q9UBY0 812 aa16.28■□□□□ 0.2
NPC1-207ENST00000588867 DDX41Q9UJV9 622 aaKnown RBP16.28■□□□□ 0.2
NPC1-207ENST00000588867 ZHX1Q9UKY1 873 aaPredicted RBP16.28■□□□□ 0.2
NPC1-207ENST00000588867 NFASCO94856 1347 aa16.27■□□□□ 0.2
NPC1-207ENST00000588867 CYP2C19P33261 490 aa16.27■□□□□ 0.2
NPC1-207ENST00000588867 PRKCZQ05513 592 aa16.27■□□□□ 0.2
NPC1-207ENST00000588867 GRB10Q13322 594 aa16.27■□□□□ 0.2
NPC1-207ENST00000588867 NEDD9Q14511 834 aa16.27■□□□□ 0.2
NPC1-207ENST00000588867 TTLL4Q14679 1199 aa16.27■□□□□ 0.2
NPC1-207ENST00000588867 EPHA7Q15375 998 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms