RNA–Protein interactions for RNA: ENST00000588831.5

LRFN3-204, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRFN3, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-204ENST00000588831 NR1D1P20393 614 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 FGFR2P21802 821 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 SLC1A4P43007 532 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 NLRP14Q86W24 1093 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 TSEN2Q8NCE0 465 aaKnown RBP13.35□□□□□ -0.27
LRFN3-204ENST00000588831 WDR66Q8TBY9 1149 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 HVCN1Q96D96 273 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 GBP5Q96PP8 586 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 OSBPL9Q96SU4 736 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 DCP1AQ9NPI6 582 aaPredicted RBP13.35□□□□□ -0.27
LRFN3-204ENST00000588831 ZNF711Q9Y462 761 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 UTRNP46939 3433 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 OVOS2A0A0G2JMS6 1433 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 SMCO2A6NFE2 343 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 TRIM28Q13263 835 aaKnown RBP13.35□□□□□ -0.27
LRFN3-204ENST00000588831 TRAPPC11Q7Z392 1133 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 ADSSL1Q8N142 457 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 LRRC47Q8N1G4 583 aaKnown RBP13.35□□□□□ -0.27
LRFN3-204ENST00000588831 ARFGEF2Q9Y6D5 1785 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 ZNF263O14978 683 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 HIP1RO75146 1068 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 HNRNPCP07910 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
LRFN3-204ENST00000588831 KIF11P52732 1056 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 ALX1Q15699 326 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 NPY5RQ15761 445 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 TRIM42Q8IWZ5 723 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 AP1M1Q9BXS5 423 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 UBXN6Q9BZV1 441 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 RBM12Q9NTZ6 932 aaKnown RBP13.35□□□□□ -0.27
LRFN3-204ENST00000588831 ZNF219Q9P2Y4 722 aaPredicted RBP13.35□□□□□ -0.27
LRFN3-204ENST00000588831 ANAPC4Q9UJX5 808 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 RAB21Q9UL25 225 aa13.35□□□□□ -0.27
LRFN3-204ENST00000588831 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.34□□□□□ -0.27
LRFN3-204ENST00000588831 KLRF2D3W0D1 207 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 CARSP49589 748 aaKnown RBP13.34□□□□□ -0.27
LRFN3-204ENST00000588831 SMTNP53814 917 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 POLR2FP61218 127 aaKnown RBP13.34□□□□□ -0.27
LRFN3-204ENST00000588831 PDE1CQ14123 709 aaPredicted RBP13.34□□□□□ -0.27
LRFN3-204ENST00000588831 NAALADL2Q58DX5 795 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 SH3RF1Q7Z6J0 888 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 ARFGAP2Q8N6H7 521 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 BICD1Q96G01 975 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 PCDHA13Q9Y5I0 950 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 MYH15Q9Y2K3 1946 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 ATP6V1G1O75348 118 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 FAM153BP0C7A2 387 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 DNM2P50570 870 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 AMPD2Q01433 879 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 UBE4AQ14139 1066 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 FAM153CQ494X1 144 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 ZC3H12AQ5D1E8 599 aaKnown RBP13.34□□□□□ -0.27
LRFN3-204ENST00000588831 ARHGAP22Q7Z5H3 698 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 P2RX5Q93086 422 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 CCDC51Q96ER9 411 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 FAM84BQ96KN1 310 aaPredicted RBP13.34□□□□□ -0.27
LRFN3-204ENST00000588831 KDM4CQ9H3R0 1056 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 SAMD15Q9P1V8 674 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 ADAMTS1Q9UHI8 967 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 FAM153AQ9UHL3 310 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 MRC1P22897 1456 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 BAZ2AQ9UIF9 1905 aaKnown RBP13.34□□□□□ -0.27
LRFN3-204ENST00000588831 NPHP3-ACAD11A0A0J9YXS1 232 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 LSP1P33241 339 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 RFC4P35249 363 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 PRPHP41219 470 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 SLC8A3P57103 927 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 NKX1-1Q15270 411 aaPredicted RBP13.34□□□□□ -0.27
LRFN3-204ENST00000588831 UBE2SQ16763 222 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 SLC30A10Q6XR72 485 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 SPATA20Q8TB22 786 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 MGARPQ8TDB4 240 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 ZNF384Q8TF68 577 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 SALL4Q9UJQ4 1053 aa13.34□□□□□ -0.27
LRFN3-204ENST00000588831 SLC16A2P36021 539 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 GRIK5Q16478 980 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 MUM1Q2TAK8 710 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 CCNI2Q6ZMN8 369 aaPredicted RBP13.33□□□□□ -0.28
LRFN3-204ENST00000588831 PIGSQ96S52 555 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 RIOK1Q9BRS2 568 aaKnown RBP13.33□□□□□ -0.28
LRFN3-204ENST00000588831 FBXO3Q9UK99 471 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.33□□□□□ -0.28
LRFN3-204ENST00000588831 C6orf229H3BNL8 230 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 PAX3P23760 479 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 PSMC4P43686 418 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 ERFP50548 548 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 SNAP25P60880 206 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 FUT2Q10981 343 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 ITPK1Q13572 414 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 PARP10Q53GL7 1025 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 SPATA4Q8NEY3 305 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 TBCKQ8TEA7 893 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 SH3RF3Q8TEJ3 882 aaPredicted RBP13.33□□□□□ -0.28
LRFN3-204ENST00000588831 SWAP70Q9UH65 585 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 FAM184BQ9ULE4 1060 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 TMEM110-MUSTN1A8MSY1 372 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 PYGBP11216 843 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 MAP7D1Q3KQU3 841 aa13.33□□□□□ -0.28
LRFN3-204ENST00000588831 TBC1D10BQ4KMP7 808 aaPredicted RBP13.33□□□□□ -0.28
LRFN3-204ENST00000588831 SPATS2Q86XZ4 545 aaKnown RBP13.33□□□□□ -0.28
LRFN3-204ENST00000588831 KIF2BQ8N4N8 673 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms