RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 BLIDQ8IZY5 108 aa11.52□□□□□ -0.57
TPM4-207ENST00000588032 NECAB1Q8N987 351 aa11.52□□□□□ -0.57
TPM4-207ENST00000588032 CRYGNQ8WXF5 182 aa11.52□□□□□ -0.57
TPM4-207ENST00000588032 TRIM43Q96BQ3 446 aaPredicted RBP11.52□□□□□ -0.57
TPM4-207ENST00000588032 PGBD1Q96JS3 809 aa11.52□□□□□ -0.57
TPM4-207ENST00000588032 LLPHQ9BRT6 129 aaKnown RBP11.52□□□□□ -0.57
TPM4-207ENST00000588032 SH2B1Q9NRF2 756 aaPredicted RBP11.52□□□□□ -0.57
TPM4-207ENST00000588032 KCNH7Q9NS40 1196 aa11.52□□□□□ -0.57
TPM4-207ENST00000588032 ORC3Q9UBD5 711 aaPredicted RBP11.52□□□□□ -0.57
TPM4-207ENST00000588032 TBX21Q9UL17 535 aa11.52□□□□□ -0.57
TPM4-207ENST00000588032 BRCA2P51587 3418 aa11.51□□□□□ -0.57
TPM4-207ENST00000588032 HAS3O00219 553 aa11.51□□□□□ -0.57
TPM4-207ENST00000588032 ST18O60284 1047 aa11.51□□□□□ -0.57
TPM4-207ENST00000588032 B4GALT4O60513 344 aa11.51□□□□□ -0.57
TPM4-207ENST00000588032 F2P00734 622 aa11.51□□□□□ -0.57
TPM4-207ENST00000588032 TIMP1P01033 207 aa11.51□□□□□ -0.57
TPM4-207ENST00000588032 KCNA2P16389 499 aa11.51□□□□□ -0.57
TPM4-207ENST00000588032 CIITAP33076 1130 aa11.51□□□□□ -0.57
TPM4-207ENST00000588032 FAM47CQ5HY64 1035 aa11.51□□□□□ -0.57
TPM4-207ENST00000588032 SH3RF1Q7Z6J0 888 aa11.51□□□□□ -0.57
TPM4-207ENST00000588032 SEPT1Q8WYJ6 367 aa11.51□□□□□ -0.57
TPM4-207ENST00000588032 KAT2BQ92831 832 aa11.51□□□□□ -0.57
TPM4-207ENST00000588032 GPR20Q99678 358 aa11.51□□□□□ -0.57
TPM4-207ENST00000588032 SDF4Q9BRK5 362 aa11.51□□□□□ -0.57
TPM4-207ENST00000588032 PHF20Q9BVI0 1012 aa11.51□□□□□ -0.57
TPM4-207ENST00000588032 UBE2OQ9C0C9 1292 aaKnown RBP11.51□□□□□ -0.57
TPM4-207ENST00000588032 NFASCO94856 1347 aa11.51□□□□□ -0.57
TPM4-207ENST00000588032 H3BRB1 525 aa11.5□□□□□ -0.57
TPM4-207ENST00000588032 M0R2N6 131 aa11.5□□□□□ -0.57
TPM4-207ENST00000588032 ATP9AO75110 1047 aa11.5□□□□□ -0.57
TPM4-207ENST00000588032 LARGE1O95461 756 aa11.5□□□□□ -0.57
TPM4-207ENST00000588032 FDPSP14324 419 aaKnown RBP11.5□□□□□ -0.57
TPM4-207ENST00000588032 PSEN2P49810 448 aa11.5□□□□□ -0.57
TPM4-207ENST00000588032 MDM2Q00987 491 aaPredicted RBP11.5□□□□□ -0.57
TPM4-207ENST00000588032 SETQ01105 290 aaPredicted RBP11.5□□□□□ -0.57
TPM4-207ENST00000588032 MFSD10Q14728 455 aa11.5□□□□□ -0.57
TPM4-207ENST00000588032 KIAA0753Q2KHM9 967 aa11.5□□□□□ -0.57
TPM4-207ENST00000588032 HABP4Q5JVS0 413 aaKnown RBP11.5□□□□□ -0.57
TPM4-207ENST00000588032 PLA2G4DQ86XP0 818 aa11.5□□□□□ -0.57
TPM4-207ENST00000588032 TMEM199Q8N511 208 aa11.5□□□□□ -0.57
TPM4-207ENST00000588032 C7orf31Q8N865 590 aa11.5□□□□□ -0.57
TPM4-207ENST00000588032 NSUN7Q8NE18 718 aaKnown RBP11.5□□□□□ -0.57
TPM4-207ENST00000588032 CYP2W1Q8TAV3 490 aa11.5□□□□□ -0.57
TPM4-207ENST00000588032 BADQ92934 168 aa11.5□□□□□ -0.57
TPM4-207ENST00000588032 TBC1D32Q96NH3 1257 aa11.5□□□□□ -0.57
TPM4-207ENST00000588032 AIFM3Q96NN9 605 aa11.5□□□□□ -0.57
TPM4-207ENST00000588032 C16orf70Q9BSU1 422 aa11.5□□□□□ -0.57
TPM4-207ENST00000588032 ALG1Q9BT22 464 aa11.5□□□□□ -0.57
TPM4-207ENST00000588032 TUT1Q9H6E5 874 aaKnown RBP11.5□□□□□ -0.57
TPM4-207ENST00000588032 AGO4Q9HCK5 861 aaKnown RBP11.5□□□□□ -0.57
TPM4-207ENST00000588032 ZNF215Q9UL58 517 aaPredicted RBP11.5□□□□□ -0.57
TPM4-207ENST00000588032 FAM86B1E9PN63 330 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 SORBS3O60504 671 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 LGALS2P05162 132 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 FAM86B2P0C5J1 330 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 ARP10275 920 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 MCM2P49736 904 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 TRIM29Q14134 588 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 NONOQ15233 471 aaKnown RBP eCLIP11.49□□□□□ -0.57
TPM4-207ENST00000588032 MFSD5Q6N075 450 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 KRT25Q7Z3Z0 450 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 RASGRP4Q8TDF6 673 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 TBCKQ8TEA7 893 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 TNPO1Q92973 898 aaKnown RBP11.49□□□□□ -0.57
TPM4-207ENST00000588032 BACH2Q9BYV9 841 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 TRPV6Q9H1D0 765 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 HIPK3Q9H422 1215 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 BCAS3Q9H6U6 928 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 BRMS1Q9HCU9 246 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 JPH1Q9HDC5 661 aaPredicted RBP11.49□□□□□ -0.57
TPM4-207ENST00000588032 TBC1D22BQ9NU19 505 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 SLC9A2Q9UBY0 812 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 GTF2IRD1Q9UHL9 959 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 NOD1Q9Y239 953 aa11.49□□□□□ -0.57
TPM4-207ENST00000588032 IGLV3-22A0A075B6J6 115 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 CCDC194A0A1B0GVG4 234 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 IPO5O00410 1097 aaKnown RBP11.48□□□□□ -0.57
TPM4-207ENST00000588032 ADAMTS3O15072 1205 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 ZNF286BP0CG31 522 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 GNAT1P11488 350 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 ITGB8P26012 769 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 TCF7P36402 384 aaPredicted RBP11.48□□□□□ -0.57
TPM4-207ENST00000588032 CHMP4BP1P59074 171 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 HMGN5P82970 282 aaKnown RBP11.48□□□□□ -0.57
TPM4-207ENST00000588032 FPGSQ05932 587 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 PPIGQ13427 754 aaKnown RBP eCLIP11.48□□□□□ -0.57
TPM4-207ENST00000588032 BFSP2Q13515 415 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 NPY5RQ15761 445 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 PTGISQ16647 500 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 PRR16Q569H4 304 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 MOXD1Q6UVY6 613 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 TDHQ8IZJ6 230 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 CCDC155Q8N6L0 562 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 NAP1L4Q99733 375 aaKnown RBP11.48□□□□□ -0.57
TPM4-207ENST00000588032 SMARCAD1Q9H4L7 1026 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 TRMT13Q9NUP7 481 aaKnown RBP11.48□□□□□ -0.57
TPM4-207ENST00000588032 HDAC6Q9UBN7 1215 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 KCNJ14Q9UNX9 436 aa11.48□□□□□ -0.57
TPM4-207ENST00000588032 TNRC18O15417 2968 aaPredicted RBP11.47□□□□□ -0.57
TPM4-207ENST00000588032 SCN10AQ9Y5Y9 1956 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms