RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 CYFIP1Q7L576 1253 aa12.9□□□□□ -0.34
ACTN4-209ENST00000586538 CCDC12Q8WUD4 166 aaPredicted RBP12.9□□□□□ -0.34
ACTN4-209ENST00000586538 ATP6V0A1Q93050 837 aa12.9□□□□□ -0.34
ACTN4-209ENST00000586538 C16orf70Q9BSU1 422 aa12.9□□□□□ -0.34
ACTN4-209ENST00000586538 RTEL1Q9NZ71 1219 aa12.9□□□□□ -0.34
ACTN4-209ENST00000586538 GOLGA8AA7E2F4 631 aa12.89□□□□□ -0.35
ACTN4-209ENST00000586538 GOLGA8BA8MQT2 603 aa12.89□□□□□ -0.35
ACTN4-209ENST00000586538 CXCL10P02778 98 aa12.89□□□□□ -0.35
ACTN4-209ENST00000586538 NAPAP54920 295 aa12.89□□□□□ -0.35
ACTN4-209ENST00000586538 SP2Q02086 613 aa12.89□□□□□ -0.35
ACTN4-209ENST00000586538 AP3B2Q13367 1082 aa12.89□□□□□ -0.35
ACTN4-209ENST00000586538 MTMR1Q13613 665 aa12.89□□□□□ -0.35
ACTN4-209ENST00000586538 SERINC5Q86VE9 423 aa12.89□□□□□ -0.35
ACTN4-209ENST00000586538 CCDC82Q8N4S0 544 aa12.89□□□□□ -0.35
ACTN4-209ENST00000586538 GPR20Q99678 358 aa12.89□□□□□ -0.35
ACTN4-209ENST00000586538 ZBED2Q9BTP6 218 aa12.89□□□□□ -0.35
ACTN4-209ENST00000586538 LRRC2Q9BYS8 371 aa12.89□□□□□ -0.35
ACTN4-209ENST00000586538 PRDM12Q9H4Q4 367 aa12.89□□□□□ -0.35
ACTN4-209ENST00000586538 GBF1Q92538 1859 aa12.89□□□□□ -0.35
ACTN4-209ENST00000586538 CNTNAP5Q8WYK1 1306 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 NRCAMQ92823 1304 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 SCN5AQ14524 2016 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 RSPH10B2B2RC85 870 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 TLL1O43897 1013 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 RSPH10BP0C881 870 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 SMIM10L2AP0DMW4 78 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 SMIM10L2BP0DMW5 78 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 IGFBP4P22692 258 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 METAP2P50579 478 aaKnown RBP eCLIP12.88□□□□□ -0.35
ACTN4-209ENST00000586538 ADCY7P51828 1080 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 EXOSC10Q01780 885 aaKnown RBP12.88□□□□□ -0.35
ACTN4-209ENST00000586538 TAF2Q6P1X5 1199 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 RSPH3Q86UC2 560 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 HERC6Q8IVU3 1022 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 SEPT1Q8WYJ6 367 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 APBB2Q92870 758 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 RIC8AQ9NPQ8 531 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 PCDHA6Q9UN73 950 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 YBX2Q9Y2T7 364 aaKnown RBP12.88□□□□□ -0.35
ACTN4-209ENST00000586538 PCDHA8Q9Y5H6 950 aa12.88□□□□□ -0.35
ACTN4-209ENST00000586538 TRIP12Q14669 1992 aaPredicted RBP12.87□□□□□ -0.35
ACTN4-209ENST00000586538 KLF18A0A0U1RQI7 1052 aa12.87□□□□□ -0.35
ACTN4-209ENST00000586538 SORBS3O60504 671 aa12.87□□□□□ -0.35
ACTN4-209ENST00000586538 LGR5O75473 907 aa12.87□□□□□ -0.35
ACTN4-209ENST00000586538 CA3P07451 260 aa12.87□□□□□ -0.35
ACTN4-209ENST00000586538 HOXC8P31273 242 aa12.87□□□□□ -0.35
ACTN4-209ENST00000586538 THPOP40225 353 aa12.87□□□□□ -0.35
ACTN4-209ENST00000586538 RABGGTBP53611 331 aa12.87□□□□□ -0.35
ACTN4-209ENST00000586538 WDR5P61964 334 aaKnown RBP12.87□□□□□ -0.35
ACTN4-209ENST00000586538 AKAP17AQ02040 695 aaKnown RBP12.87□□□□□ -0.35
ACTN4-209ENST00000586538 ZNF618Q5T7W0 954 aa12.87□□□□□ -0.35
ACTN4-209ENST00000586538 BLOC1S2Q6QNY1 142 aa12.87□□□□□ -0.35
ACTN4-209ENST00000586538 CMTR1Q8N1G2 835 aaKnown RBP12.87□□□□□ -0.35
ACTN4-209ENST00000586538 IL27Q8NEV9 243 aa12.87□□□□□ -0.35
ACTN4-209ENST00000586538 PPP1R13LQ8WUF5 828 aa12.87□□□□□ -0.35
ACTN4-209ENST00000586538 DHX38Q92620 1227 aaKnown RBP12.87□□□□□ -0.35
ACTN4-209ENST00000586538 CTAGE1Q96RT6 745 aa12.87□□□□□ -0.35
ACTN4-209ENST00000586538 SDF4Q9BRK5 362 aa12.87□□□□□ -0.35
ACTN4-209ENST00000586538 AZI2Q9H6S1 392 aa12.87□□□□□ -0.35
ACTN4-209ENST00000586538 ERAP1Q9NZ08 941 aa12.87□□□□□ -0.35
ACTN4-209ENST00000586538 NAP1L2Q9ULW6 460 aaPredicted RBP12.87□□□□□ -0.35
ACTN4-209ENST00000586538 AMHP03971 560 aa12.86□□□□□ -0.35
ACTN4-209ENST00000586538 TCF7P36402 384 aaPredicted RBP12.86□□□□□ -0.35
ACTN4-209ENST00000586538 SP4Q02446 784 aa12.86□□□□□ -0.35
ACTN4-209ENST00000586538 AAK1Q2M2I8 961 aa12.86□□□□□ -0.35
ACTN4-209ENST00000586538 TJAP1Q5JTD0 557 aa12.86□□□□□ -0.35
ACTN4-209ENST00000586538 UTP14CQ5TAP6 766 aaKnown RBP12.86□□□□□ -0.35
ACTN4-209ENST00000586538 WWC2Q6AWC2 1192 aa12.86□□□□□ -0.35
ACTN4-209ENST00000586538 ATXN2LQ8WWM7 1075 aaKnown RBP12.86□□□□□ -0.35
ACTN4-209ENST00000586538 SEPT8Q92599 483 aa12.86□□□□□ -0.35
ACTN4-209ENST00000586538 GLG1Q92896 1179 aa12.86□□□□□ -0.35
ACTN4-209ENST00000586538 GPKOWQ92917 476 aaPredicted RBP eCLIP12.86□□□□□ -0.35
ACTN4-209ENST00000586538 RNPEPQ9H4A4 650 aa12.86□□□□□ -0.35
ACTN4-209ENST00000586538 SMARCAD1Q9H4L7 1026 aa12.86□□□□□ -0.35
ACTN4-209ENST00000586538 JPH1Q9HDC5 661 aaPredicted RBP12.86□□□□□ -0.35
ACTN4-209ENST00000586538 JADE2Q9NQC1 790 aa12.86□□□□□ -0.35
ACTN4-209ENST00000586538 BARHL2Q9NY43 387 aa12.86□□□□□ -0.35
ACTN4-209ENST00000586538 THEGQ9P2T0 379 aa12.86□□□□□ -0.35
ACTN4-209ENST00000586538 TCEAL9Q9UHQ7 104 aa12.86□□□□□ -0.35
ACTN4-209ENST00000586538 UBIAD1Q9Y5Z9 338 aa12.86□□□□□ -0.35
ACTN4-209ENST00000586538 SMCO2A6NFE2 343 aa12.85□□□□□ -0.35
ACTN4-209ENST00000586538 EIF5BO60841 1220 aaKnown RBP12.85□□□□□ -0.35
ACTN4-209ENST00000586538 NBNO60934 754 aa12.85□□□□□ -0.35
ACTN4-209ENST00000586538 KCNA2P16389 499 aa12.85□□□□□ -0.35
ACTN4-209ENST00000586538 GNA11P29992 359 aa12.85□□□□□ -0.35
ACTN4-209ENST00000586538 HSPA4P34932 840 aa12.85□□□□□ -0.35
ACTN4-209ENST00000586538 ARHGAP4P98171 946 aa12.85□□□□□ -0.35
ACTN4-209ENST00000586538 SEMA3FQ13275 785 aa12.85□□□□□ -0.35
ACTN4-209ENST00000586538 UBE2SQ16763 222 aa12.85□□□□□ -0.35
ACTN4-209ENST00000586538 TRIM71Q2Q1W2 868 aaKnown RBP12.85□□□□□ -0.35
ACTN4-209ENST00000586538 FAM43BQ6ZT52 329 aaPredicted RBP12.85□□□□□ -0.35
ACTN4-209ENST00000586538 RAB11FIP4Q86YS3 637 aa12.85□□□□□ -0.35
ACTN4-209ENST00000586538 FBXL16Q8N461 479 aa12.85□□□□□ -0.35
ACTN4-209ENST00000586538 CCDC148Q8NFR7 591 aa12.85□□□□□ -0.35
ACTN4-209ENST00000586538 BICD2Q8TD16 824 aa12.85□□□□□ -0.35
ACTN4-209ENST00000586538 VWCEQ96DN2 955 aa12.85□□□□□ -0.35
ACTN4-209ENST00000586538 ZFP91Q96JP5 570 aaPredicted RBP12.85□□□□□ -0.35
ACTN4-209ENST00000586538 JAKMIP1Q96N16 626 aaKnown RBP12.85□□□□□ -0.35
ACTN4-209ENST00000586538 RAD9AQ99638 391 aa12.85□□□□□ -0.35
ACTN4-209ENST00000586538 MXRA8Q9BRK3 442 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms