RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 TEX13BQ9BXU2 312 aa16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 ASCC2Q9H1I8 757 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 GPBP1L1Q9HC44 474 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 DDX25Q9UHL0 483 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-236ENST00000584991 A0A0G2JMZ2 1700 aa16.72■□□□□ 0.27
CDK5RAP3-236ENST00000584991 PPP1R3GB7ZBB8 358 aa16.72■□□□□ 0.27
CDK5RAP3-236ENST00000584991 TADA3O75528 432 aa16.72■□□□□ 0.27
CDK5RAP3-236ENST00000584991 URI1O94763 535 aaPredicted RBP16.72■□□□□ 0.27
CDK5RAP3-236ENST00000584991 GCFC2P16383 781 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-236ENST00000584991 STAT3P40763 770 aa16.72■□□□□ 0.27
CDK5RAP3-236ENST00000584991 TRIM14Q14142 442 aa16.72■□□□□ 0.27
CDK5RAP3-236ENST00000584991 E2F4Q16254 413 aa16.72■□□□□ 0.27
CDK5RAP3-236ENST00000584991 CALCRLQ16602 461 aa16.72■□□□□ 0.27
CDK5RAP3-236ENST00000584991 ARHGAP29Q52LW3 1261 aa16.72■□□□□ 0.27
CDK5RAP3-236ENST00000584991 LBX2Q6XYB7 198 aa16.72■□□□□ 0.27
CDK5RAP3-236ENST00000584991 ANKRD20A12PQ8NF67 263 aa16.72■□□□□ 0.27
CDK5RAP3-236ENST00000584991 GTPBP6O43824 516 aaPredicted RBP16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 PEX10O60683 326 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 HERVK_113P62684 666 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 GHRHRQ02643 423 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 PABPC4Q13310 644 aaKnown RBP eCLIP16.71■□□□□ 0.272e-7■■■□□ 15.2
CDK5RAP3-236ENST00000584991 MTMR9Q96QG7 549 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 PRDM10Q9NQV6 1147 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 BTBD7Q9P203 1132 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 COL20A1Q9P218 1284 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 LIMA1Q9UHB6 759 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 RWDD2AQ9UIY3 292 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 CYP3A7-CYP3A51PA0A087WV96 503 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 OSBPP22059 807 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 CYP3A7P24462 503 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 TXKP42681 527 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 GTF2A2P52657 109 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 HUNKP57058 714 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 GNG11P61952 73 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 UBXN2AP68543 259 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 NSMFQ6X4W1 530 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 RNF207Q6ZRF8 634 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 MB21D1Q8N884 522 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 MS4A4AQ96JQ5 239 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 EHMT1Q9H9B1 1298 aa16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.71■□□□□ 0.272e-6■□□□□ 10.3
CDK5RAP3-236ENST00000584991 V9GYY5 206 aaPredicted RBP16.71■□□□□ 0.27
CDK5RAP3-236ENST00000584991 A0A087X0B3 334 aa16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CYP3A4P08684 503 aa16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CETPP11597 493 aa16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 TXLNAP40222 546 aa16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 ADKP55263 362 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 RPS6P62753 249 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 TKFCQ3LXA3 575 aa16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 SPRYD7Q5W111 196 aa16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 MOXD1Q6UVY6 613 aa16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 TMCO3Q6UWJ1 677 aa16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 GRAMD1CQ8IYS0 662 aa16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 SAMD3Q8N6K7 520 aa16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 IGSF22Q8N9C0 903 aa16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 SYTL5Q8TDW5 730 aaPredicted RBP16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 MBOAT7Q96N66 472 aa16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 MAP3K20Q9NYL2 800 aaKnown RBP16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 MRFAP1Q9Y605 127 aa16.7■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CCL15-CCL14A0A0B4J2E2 113 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 ZRANB2O95218 330 aaKnown RBP eCLIP16.69■□□□□ 0.267e-19■□□□□ 10
CDK5RAP3-236ENST00000584991 ZNF76P36508 570 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 TECP42680 631 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 AFMP43652 599 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CLCN6P51797 869 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CCL15Q16663 113 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 ZNF658Q5TYW1 1059 aaPredicted RBP16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 SLC30A10Q6XR72 485 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 TMTC1Q8IUR5 882 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 TRMT44Q8IYL2 757 aaKnown RBP16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 RABGGTAQ92696 567 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 PAGR1Q9BTK6 254 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 MYO1AQ9UBC5 1043 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 FAM86B1E9PN63 330 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 MARCH6O60337 910 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 FAM86B2P0C5J1 330 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CDC25AP30304 524 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CIITAP33076 1130 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 BAATQ14032 418 aaPredicted RBP16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 PRR16Q569H4 304 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 PDXDC2PQ6P474 469 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 HAS1Q92839 578 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 UIMC1Q96RL1 719 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 ACAD9Q9H845 621 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 ZNF446Q9NWS9 450 aa16.69■□□□□ 0.26
CDK5RAP3-236ENST00000584991 KIF3CO14782 793 aa16.68■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CNMDO75829 334 aa16.68■□□□□ 0.26
CDK5RAP3-236ENST00000584991 ZBTB48P10074 688 aaPredicted RBP16.68■□□□□ 0.26
CDK5RAP3-236ENST00000584991 CD44P16070 742 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-236ENST00000584991 TERF2Q15554 542 aa16.68■□□□□ 0.26
CDK5RAP3-236ENST00000584991 Q4G0T1 1027 aa16.68■□□□□ 0.26
CDK5RAP3-236ENST00000584991 TAF3Q5VWG9 929 aa16.68■□□□□ 0.26
CDK5RAP3-236ENST00000584991 RSRC2Q7L4I2 434 aaKnown RBP16.68■□□□□ 0.26
CDK5RAP3-236ENST00000584991 BRI3BPQ8WY22 251 aa16.68■□□□□ 0.26
CDK5RAP3-236ENST00000584991 GJA10Q969M2 543 aa16.68■□□□□ 0.26
CDK5RAP3-236ENST00000584991 TAAR1Q96RJ0 339 aa16.68■□□□□ 0.26
CDK5RAP3-236ENST00000584991 SPATC1LQ9H0A9 340 aa16.68■□□□□ 0.26
CDK5RAP3-236ENST00000584991 ADGRG1Q9Y653 693 aa16.68■□□□□ 0.26
CDK5RAP3-236ENST00000584991 PASKQ96RG2 1323 aa16.68■□□□□ 0.26
CDK5RAP3-236ENST00000584991 PP2D1A8MPX8 630 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms