RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 MKNK2Q9HBH9 465 aa6.65□□□□□ -1.34
CDH8-213ENST00000584966 IGSF5Q9NSI5 407 aa6.65□□□□□ -1.34
CDH8-213ENST00000584966 TCP11L1Q9NUJ3 509 aa6.65□□□□□ -1.34
CDH8-213ENST00000584966 ZSWIM5Q9P217 1185 aa6.65□□□□□ -1.34
CDH8-213ENST00000584966 PLXNB2O15031 1838 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 B4E1Z4 1266 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 IGF2BP3O00425 579 aaKnown RBP eCLIP6.64□□□□□ -1.35
CDH8-213ENST00000584966 SLC3A2P08195 630 aaKnown RBP6.64□□□□□ -1.35
CDH8-213ENST00000584966 EEF2P13639 858 aaKnown RBP6.64□□□□□ -1.35
CDH8-213ENST00000584966 BACE1P56817 501 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 ANTXR2P58335 489 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 ARHGAP4P98171 946 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 NOGQ13253 232 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 RAB3GAP1Q15042 981 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 SEC23AQ15436 765 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 ADCK5Q3MIX3 580 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 CASC1Q6TDU7 716 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 KIAA1211Q6ZU35 1233 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 MB21D2Q8IYB1 491 aaPredicted RBP6.64□□□□□ -1.35
CDH8-213ENST00000584966 ANKS1AQ92625 1134 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 IL17RAQ96F46 866 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 CEP95Q96GE4 821 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 C12orf42Q96LP6 360 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 IGFLR1Q9H665 355 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 KANSL2Q9H9L4 492 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 CABP5Q9NP86 173 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 PICK1Q9NRD5 415 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 MTMR4Q9NYA4 1195 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 KIAA1522Q9P206 1035 aaPredicted RBP6.64□□□□□ -1.35
CDH8-213ENST00000584966 NYAP2Q9P242 653 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 TMX2Q9Y320 296 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 SNX14Q9Y5W7 946 aa6.64□□□□□ -1.35
CDH8-213ENST00000584966 CCL15-CCL14A0A0B4J2E2 113 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 MANSC4A6NHS7 340 aaPredicted RBP6.63□□□□□ -1.35
CDH8-213ENST00000584966 TRIM75PA6NK02 468 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 BTBD19C9JJ37 291 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 MPHOSPH10O00566 681 aaKnown RBP6.63□□□□□ -1.35
CDH8-213ENST00000584966 BACH1O14867 736 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 RANBP6O60518 1105 aaKnown RBP6.63□□□□□ -1.35
CDH8-213ENST00000584966 TSPY3P0CV98 308 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 TSPY8P0CW00 308 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 NPR3P17342 541 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 NOS3P29474 1203 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 BRCA2P51587 3418 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 GTF2A2P52657 109 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 HMGCS2P54868 508 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 INHBEP58166 350 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 EXOSC10Q01780 885 aaKnown RBP6.63□□□□□ -1.35
CDH8-213ENST00000584966 SNAPC2Q13487 334 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 MTMR3Q13615 1198 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 CCL15Q16663 113 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 TREML2Q5T2D2 321 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 PRR23CQ6ZRP0 262 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 TNS4Q8IZW8 715 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 FAM43AQ8N2R8 423 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 HELQQ8TDG4 1101 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 IGDCC4Q8TDY8 1250 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 ZDHHC1Q8WTX9 485 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 KIAA1683Q9H0B3 1180 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 R3HDMLQ9H3Y0 253 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 RNF41Q9H4P4 317 aaPredicted RBP6.63□□□□□ -1.35
CDH8-213ENST00000584966 AS3MTQ9HBK9 375 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 ZNF287Q9HBT7 754 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 DCTN4Q9UJW0 460 aa6.63□□□□□ -1.35
CDH8-213ENST00000584966 OAS3Q9Y6K5 1087 aaKnown RBP6.63□□□□□ -1.35
CDH8-213ENST00000584966 LCTP09848 1927 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 PLXNA1Q9UIW2 1896 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 ADGRA2Q96PE1 1338 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 TSPY2A6NKD2 308 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 C19orf81C9J6K1 198 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 REC8O95072 547 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 TTLL1O95922 423 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 CETPP11597 493 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 HOXA7P31268 230 aaPredicted RBP6.62□□□□□ -1.35
CDH8-213ENST00000584966 NT5C2P49902 561 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 ICA1Q05084 483 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 GRM1Q13255 1194 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 RRP12Q5JTH9 1297 aaKnown RBP6.62□□□□□ -1.35
CDH8-213ENST00000584966 CHST3Q7LGC8 479 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 ANKRD23Q86SG2 305 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 DGKHQ86XP1 1220 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 ENAHQ8N8S7 591 aaPredicted RBP6.62□□□□□ -1.35
CDH8-213ENST00000584966 NCOA7Q8NI08 942 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 SCG3Q8WXD2 468 aaKnown RBP6.62□□□□□ -1.35
CDH8-213ENST00000584966 ESR2Q92731 530 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 BHMTQ93088 406 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 MRRFQ96E11 262 aaKnown RBP6.62□□□□□ -1.35
CDH8-213ENST00000584966 MEGF10Q96KG7 1140 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 TTC14Q96N46 770 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 ASB16Q96NS5 453 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 KIF2CQ99661 725 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 TMEM47Q9BQJ4 181 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 ZKSCAN3Q9BRR0 538 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 BACH2Q9BYV9 841 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 KRT23Q9C075 422 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 UBE2OQ9C0C9 1292 aaKnown RBP6.62□□□□□ -1.35
CDH8-213ENST00000584966 VCPKMTQ9H867 229 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 CNNM2Q9H8M5 875 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 RNF186Q9NXI6 227 aa6.62□□□□□ -1.35
CDH8-213ENST00000584966 CLIP2Q9UDT6 1046 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms