RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 COL6A3P12111 3177 aa11.21□□□□□ -0.62
TOP3A-211ENST00000581536 UMODL1Q5DID0 1318 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 KLF18A0A0U1RQI7 1052 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 A6NJR5 290 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 ZEB2O60315 1214 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 B4GALT4O60513 344 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 TIMP1P01033 207 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 CDC27P30260 824 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 CYP2C18P33260 490 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 ADD1P35611 737 aaKnown RBP11.2□□□□□ -0.62
TOP3A-211ENST00000581536 GNAQP50148 359 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 CHMP4BP1P59074 171 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 MRPS9P82933 396 aaKnown RBP11.2□□□□□ -0.62
TOP3A-211ENST00000581536 PURAQ00577 322 aaKnown RBP11.2□□□□□ -0.62
TOP3A-211ENST00000581536 APOBRQ0VD83 1088 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 SYNE3Q6ZMZ3 975 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 TMTC3Q6ZXV5 915 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 C16orf59Q7L2K0 433 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 LZTS2Q9BRK4 669 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 USP26Q9BXU7 913 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 PPP1R12CQ9BZL4 782 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 PLSCR2Q9NRY7 297 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 MAP3K20Q9NYL2 800 aaKnown RBP11.2□□□□□ -0.62
TOP3A-211ENST00000581536 TBX21Q9UL17 535 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 TELO2Q9Y4R8 837 aa11.2□□□□□ -0.62
TOP3A-211ENST00000581536 NKRFO15226 690 aaKnown RBP eCLIP11.19□□□□□ -0.62
TOP3A-211ENST00000581536 ZBTB43O43298 467 aa11.19□□□□□ -0.62
TOP3A-211ENST00000581536 CABYRO75952 493 aa11.19□□□□□ -0.62
TOP3A-211ENST00000581536 CPT1AP50416 773 aa11.19□□□□□ -0.62
TOP3A-211ENST00000581536 FUT2Q10981 343 aa11.19□□□□□ -0.62
TOP3A-211ENST00000581536 KRT32Q14532 448 aa11.19□□□□□ -0.62
TOP3A-211ENST00000581536 NBPF20Q3BBV1 942 aa11.19□□□□□ -0.62
TOP3A-211ENST00000581536 LRIT3Q3SXY7 679 aa11.19□□□□□ -0.62
TOP3A-211ENST00000581536 THSD4Q6ZMP0 1018 aa11.19□□□□□ -0.62
TOP3A-211ENST00000581536 Q7L0L9 218 aa11.19□□□□□ -0.62
TOP3A-211ENST00000581536 SAMD3Q8N6K7 520 aa11.19□□□□□ -0.62
TOP3A-211ENST00000581536 MTG1Q9BT17 334 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-211ENST00000581536 TMEM134Q9H6X4 195 aa11.19□□□□□ -0.62
TOP3A-211ENST00000581536 TRMT13Q9NUP7 481 aaKnown RBP11.19□□□□□ -0.62
TOP3A-211ENST00000581536 POLR3EQ9NVU0 708 aa11.19□□□□□ -0.62
TOP3A-211ENST00000581536 NAP1L2Q9ULW6 460 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-211ENST00000581536 V9GY48 417 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-211ENST00000581536 KAT6AQ92794 2004 aa11.19□□□□□ -0.62
TOP3A-211ENST00000581536 ADAMTS3O15072 1205 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 PPFIA3O75145 1194 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 GH1P01241 217 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 MMP3P08254 477 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 ACRP10323 421 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 CYP2C9P11712 490 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 CCL23P55773 120 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 TRAF1Q13077 416 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 UBE2SQ16763 222 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 RTN1Q16799 776 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 MYSM1Q5VVJ2 828 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 MFSD5Q6N075 450 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 SMARCC2Q8TAQ2 1214 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 KAT2BQ92831 832 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 BRF1Q92994 677 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 ALDH8A1Q9H2A2 487 aaPredicted RBP11.18□□□□□ -0.62
TOP3A-211ENST00000581536 PSTPIP2Q9H939 334 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 SEC63Q9UGP8 760 aaKnown RBP11.18□□□□□ -0.62
TOP3A-211ENST00000581536 MRVI1Q9Y6F6 885 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 TET1Q8NFU7 2136 aa11.18□□□□□ -0.62
TOP3A-211ENST00000581536 GBF1Q92538 1859 aa11.17□□□□□ -0.62
TOP3A-211ENST00000581536 MROH7Q68CQ1 1323 aa11.17□□□□□ -0.62
TOP3A-211ENST00000581536 GOLGA8AA7E2F4 631 aa11.17□□□□□ -0.62
TOP3A-211ENST00000581536 GOLGA8BA8MQT2 603 aa11.17□□□□□ -0.62
TOP3A-211ENST00000581536 TLR3O15455 904 aaKnown RBP11.17□□□□□ -0.62
TOP3A-211ENST00000581536 HMGB1P09429 215 aaKnown RBP11.17□□□□□ -0.62
TOP3A-211ENST00000581536 CSF2RAP15509 400 aa11.17□□□□□ -0.62
TOP3A-211ENST00000581536 CASTP20810 708 aaKnown RBP11.17□□□□□ -0.62
TOP3A-211ENST00000581536 RPS6KB1P23443 525 aa11.17□□□□□ -0.62
TOP3A-211ENST00000581536 CCND2P30279 289 aa11.17□□□□□ -0.62
TOP3A-211ENST00000581536 FPGSQ05932 587 aa11.17□□□□□ -0.62
TOP3A-211ENST00000581536 SEMA3FQ13275 785 aa11.17□□□□□ -0.62
TOP3A-211ENST00000581536 HSDL1Q3SXM5 330 aa11.17□□□□□ -0.62
TOP3A-211ENST00000581536 ERICH6BQ5W0A0 696 aa11.17□□□□□ -0.62
TOP3A-211ENST00000581536 BLOC1S2Q6QNY1 142 aa11.17□□□□□ -0.62
TOP3A-211ENST00000581536 HEATR3Q7Z4Q2 680 aa11.17□□□□□ -0.62
TOP3A-211ENST00000581536 DHX37Q8IY37 1157 aaKnown RBP11.17□□□□□ -0.62
TOP3A-211ENST00000581536 HCSTQ9UBK5 93 aa11.17□□□□□ -0.62
TOP3A-211ENST00000581536 CNTNAP5Q8WYK1 1306 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 PIK3CDO00329 1044 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 KPNA6O60684 536 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 REC8O95072 547 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 GGPS1O95749 300 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 CENPBP07199 599 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-211ENST00000581536 CCT2P78371 535 aaKnown RBP11.16□□□□□ -0.62
TOP3A-211ENST00000581536 FGD1P98174 961 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 LAMC2Q13753 1193 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 BRDTQ58F21 947 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-211ENST00000581536 FAM47CQ5HY64 1035 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 CELF3Q5SZQ8 465 aaKnown RBP11.16□□□□□ -0.62
TOP3A-211ENST00000581536 SWT1Q5T5J6 900 aaKnown RBP11.16□□□□□ -0.62
TOP3A-211ENST00000581536 WWC2Q6AWC2 1192 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 CUL5Q93034 780 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 VWCEQ96DN2 955 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 SCLYQ96I15 445 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 PGBD1Q96JS3 809 aa11.16□□□□□ -0.62
TOP3A-211ENST00000581536 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.16□□□□□ -0.623e-10■■■■□ 19.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms