RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 AIFM3Q96NN9 605 aa14.42□□□□□ -0.1
SNORD55-201ENST00000581525 GPR20Q99678 358 aa14.42□□□□□ -0.1
SNORD55-201ENST00000581525 LLPHQ9BRT6 129 aaKnown RBP14.42□□□□□ -0.1
SNORD55-201ENST00000581525 MLXIPQ9HAP2 919 aa14.42□□□□□ -0.1
SNORD55-201ENST00000581525 COLQQ9Y215 455 aaPredicted RBP14.42□□□□□ -0.1
SNORD55-201ENST00000581525 CYP3A7-CYP3A51PA0A087WV96 503 aa14.41□□□□□ -0.1
SNORD55-201ENST00000581525 FAM86B1E9PN63 330 aa14.41□□□□□ -0.1
SNORD55-201ENST00000581525 ATG7O95352 703 aa14.41□□□□□ -0.1
SNORD55-201ENST00000581525 TIMP1P01033 207 aa14.41□□□□□ -0.1
SNORD55-201ENST00000581525 FAM86B2P0C5J1 330 aa14.41□□□□□ -0.1
SNORD55-201ENST00000581525 SYN1P17600 705 aa14.41□□□□□ -0.1
SNORD55-201ENST00000581525 CYP3A7P24462 503 aa14.41□□□□□ -0.1
SNORD55-201ENST00000581525 HOXC8P31273 242 aa14.41□□□□□ -0.1
SNORD55-201ENST00000581525 MAGEA10P43363 369 aaPredicted RBP14.41□□□□□ -0.1
SNORD55-201ENST00000581525 NLRP5P59047 1200 aa14.41□□□□□ -0.1
SNORD55-201ENST00000581525 PSMC6P62333 389 aa14.41□□□□□ -0.1
SNORD55-201ENST00000581525 BLIDQ8IZY5 108 aa14.41□□□□□ -0.1
SNORD55-201ENST00000581525 WASF1Q92558 559 aa14.41□□□□□ -0.1
SNORD55-201ENST00000581525 PGBD1Q96JS3 809 aa14.41□□□□□ -0.1
SNORD55-201ENST00000581525 UPF2Q9HAU5 1272 aaKnown RBP14.41□□□□□ -0.1
SNORD55-201ENST00000581525 SH2B1Q9NRF2 756 aaPredicted RBP14.41□□□□□ -0.1
SNORD55-201ENST00000581525 ORC3Q9UBD5 711 aaPredicted RBP14.41□□□□□ -0.1
SNORD55-201ENST00000581525 TLR3O15455 904 aaKnown RBP14.4□□□□□ -0.1
SNORD55-201ENST00000581525 DHX15O43143 795 aaKnown RBP14.4□□□□□ -0.1
SNORD55-201ENST00000581525 B4GALT4O60513 344 aa14.4□□□□□ -0.1
SNORD55-201ENST00000581525 PQBP1O60828 265 aaKnown RBP14.4□□□□□ -0.1
SNORD55-201ENST00000581525 SUPT20HL2P0C7V6 817 aa14.4□□□□□ -0.1
SNORD55-201ENST00000581525 ARP10275 920 aa14.4□□□□□ -0.1
SNORD55-201ENST00000581525 MOXD1Q6UVY6 613 aa14.4□□□□□ -0.1
SNORD55-201ENST00000581525 CHRDL2Q6WN34 429 aa14.4□□□□□ -0.1
SNORD55-201ENST00000581525 LENG9Q96B70 501 aa14.4□□□□□ -0.1
SNORD55-201ENST00000581525 MBOAT7Q96N66 472 aa14.4□□□□□ -0.1
SNORD55-201ENST00000581525 KATNAL1Q9BW62 490 aa14.4□□□□□ -0.1
SNORD55-201ENST00000581525 AGO4Q9HCK5 861 aaKnown RBP14.4□□□□□ -0.1
SNORD55-201ENST00000581525 TMEM39AQ9NV64 488 aa14.4□□□□□ -0.1
SNORD55-201ENST00000581525 PRKAG2Q9UGJ0 569 aa14.4□□□□□ -0.1
SNORD55-201ENST00000581525 LAMA3Q16787 3333 aa14.39□□□□□ -0.11
SNORD55-201ENST00000581525 GSTTP1A0A1W2PQM5 241 aa14.39□□□□□ -0.11
SNORD55-201ENST00000581525 XBP1P17861 261 aa14.39□□□□□ -0.11
SNORD55-201ENST00000581525 PSEN2P49810 448 aa14.39□□□□□ -0.11
SNORD55-201ENST00000581525 HABP4Q5JVS0 413 aaKnown RBP14.39□□□□□ -0.11
SNORD55-201ENST00000581525 MFSD5Q6N075 450 aa14.39□□□□□ -0.11
SNORD55-201ENST00000581525 RASGRP4Q8TDF6 673 aa14.39□□□□□ -0.11
SNORD55-201ENST00000581525 SEPT1Q8WYJ6 367 aa14.39□□□□□ -0.11
SNORD55-201ENST00000581525 CTAGE1Q96RT6 745 aa14.39□□□□□ -0.11
SNORD55-201ENST00000581525 TRPV6Q9H1D0 765 aa14.39□□□□□ -0.11
SNORD55-201ENST00000581525 TELO2Q9Y4R8 837 aa14.39□□□□□ -0.11
SNORD55-201ENST00000581525 LAMA2P24043 3122 aaKnown RBP14.39□□□□□ -0.11
SNORD55-201ENST00000581525 IGKV6D-21A0A0A0MT36 114 aa14.38□□□□□ -0.11
SNORD55-201ENST00000581525 H3BRB1 525 aa14.38□□□□□ -0.11
SNORD55-201ENST00000581525 LGR5O75473 907 aa14.38□□□□□ -0.11
SNORD55-201ENST00000581525 LGALS2P05162 132 aa14.38□□□□□ -0.11
SNORD55-201ENST00000581525 RBL2Q08999 1139 aa14.38□□□□□ -0.11
SNORD55-201ENST00000581525 ITGB3BPQ13352 177 aaPredicted RBP14.38□□□□□ -0.11
SNORD55-201ENST00000581525 MFSD10Q14728 455 aa14.38□□□□□ -0.11
SNORD55-201ENST00000581525 Q4G0T1 1027 aa14.38□□□□□ -0.11
SNORD55-201ENST00000581525 BADQ92934 168 aa14.38□□□□□ -0.11
SNORD55-201ENST00000581525 TNFRSF25Q93038 417 aa14.38□□□□□ -0.11
SNORD55-201ENST00000581525 ALG1Q9BT22 464 aa14.38□□□□□ -0.11
SNORD55-201ENST00000581525 TUT1Q9H6E5 874 aaKnown RBP14.38□□□□□ -0.11
SNORD55-201ENST00000581525 GTF2IRD1Q9UHL9 959 aa14.38□□□□□ -0.11
SNORD55-201ENST00000581525 KCNJ14Q9UNX9 436 aa14.38□□□□□ -0.11
SNORD55-201ENST00000581525 MYH7BA7E2Y1 1941 aa14.37□□□□□ -0.11
SNORD55-201ENST00000581525 JAK2O60674 1132 aa14.37□□□□□ -0.11
SNORD55-201ENST00000581525 RAG1P15918 1043 aa14.37□□□□□ -0.11
SNORD55-201ENST00000581525 ADAM17P78536 824 aa14.37□□□□□ -0.11
SNORD55-201ENST00000581525 SETQ01105 290 aaPredicted RBP14.37□□□□□ -0.11
SNORD55-201ENST00000581525 KIAA0753Q2KHM9 967 aa14.37□□□□□ -0.11
SNORD55-201ENST00000581525 KRT25Q7Z3Z0 450 aa14.37□□□□□ -0.11
SNORD55-201ENST00000581525 PLA2G4DQ86XP0 818 aa14.37□□□□□ -0.11
SNORD55-201ENST00000581525 TBCKQ8TEA7 893 aa14.37□□□□□ -0.11
SNORD55-201ENST00000581525 NOC4LQ9BVI4 516 aaKnown RBP14.37□□□□□ -0.11
SNORD55-201ENST00000581525 GJB4Q9NTQ9 266 aa14.37□□□□□ -0.11
SNORD55-201ENST00000581525 TBC1D22BQ9NU19 505 aa14.37□□□□□ -0.11
SNORD55-201ENST00000581525 SLC9A2Q9UBY0 812 aa14.37□□□□□ -0.11
SNORD55-201ENST00000581525 IPO5O00410 1097 aaKnown RBP14.36□□□□□ -0.11
SNORD55-201ENST00000581525 NOP56O00567 594 aaKnown RBP14.36□□□□□ -0.11
SNORD55-201ENST00000581525 ST18O60284 1047 aa14.36□□□□□ -0.11
SNORD55-201ENST00000581525 ZNF76P36508 570 aa14.36□□□□□ -0.11
SNORD55-201ENST00000581525 MCM2P49736 904 aa14.36□□□□□ -0.11
SNORD55-201ENST00000581525 HMGN5P82970 282 aaKnown RBP14.36□□□□□ -0.11
SNORD55-201ENST00000581525 MDM2Q00987 491 aaPredicted RBP14.36□□□□□ -0.11
SNORD55-201ENST00000581525 PPP4R3AQ6IN85 833 aa14.36□□□□□ -0.11
SNORD55-201ENST00000581525 GDF6Q6KF10 455 aaPredicted RBP14.36□□□□□ -0.11
SNORD55-201ENST00000581525 ABHD15Q6UXT9 468 aa14.36□□□□□ -0.11
SNORD55-201ENST00000581525 VWCEQ96DN2 955 aa14.36□□□□□ -0.11
SNORD55-201ENST00000581525 PCYT2Q99447 389 aa14.36□□□□□ -0.11
SNORD55-201ENST00000581525 LBHD1Q9BQE6 289 aaPredicted RBP14.36□□□□□ -0.11
SNORD55-201ENST00000581525 TRMT13Q9NUP7 481 aaKnown RBP14.36□□□□□ -0.11
SNORD55-201ENST00000581525 HDAC6Q9UBN7 1215 aa14.36□□□□□ -0.11
SNORD55-201ENST00000581525 EMSYQ7Z589 1322 aa14.36□□□□□ -0.11
SNORD55-201ENST00000581525 LTBP2Q14767 1821 aa14.36□□□□□ -0.11
SNORD55-201ENST00000581525 PITPNM1O00562 1244 aa14.35□□□□□ -0.11
SNORD55-201ENST00000581525 MMP1P03956 469 aa14.35□□□□□ -0.11
SNORD55-201ENST00000581525 ZNF286BP0CG31 522 aa14.35□□□□□ -0.11
SNORD55-201ENST00000581525 TCF7P36402 384 aaPredicted RBP14.35□□□□□ -0.11
SNORD55-201ENST00000581525 ACTR2P61160 394 aa14.35□□□□□ -0.11
SNORD55-201ENST00000581525 HIC1Q14526 733 aa14.35□□□□□ -0.11
SNORD55-201ENST00000581525 NONOQ15233 471 aaKnown RBP eCLIP14.35□□□□□ -0.11
SNORD55-201ENST00000581525 LRIT3Q3SXY7 679 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms