RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 RGS20O76081 388 aa13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 ARP10275 920 aa13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 UBA1P22314 1058 aaKnown RBP13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 LONP1P36776 959 aaKnown RBP13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 TXLNAP40222 546 aa13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 TXKP42681 527 aa13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 CPT1AP50416 773 aa13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 CEBPZQ03701 1054 aaKnown RBP13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 PDIA5Q14554 519 aa13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 MAP3K21Q5TCX8 1036 aa13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 HAUS3Q68CZ6 603 aa13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 ZNF746Q6NUN9 644 aaPredicted RBP13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 FAM173BQ6P4H8 233 aa13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 KRI1Q8N9T8 703 aaKnown RBP13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 LINC00301Q8NCQ3 95 aa13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 CYP2W1Q8TAV3 490 aa13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 TNPO1Q92973 898 aaKnown RBP13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 EMID1Q96A84 441 aaPredicted RBP13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 MTMR9Q96QG7 549 aa13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 KATNBL1Q9H079 304 aa13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 SLC9A2Q9UBY0 812 aa13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 CLIC4Q9Y696 253 aa13.25□□□□□ -0.29
SNORD3C-201ENST00000580533 DOCK3Q8IZD9 2030 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 MYH15Q9Y2K3 1946 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 WDR64B1ANS9 1081 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 SLC26A4O43511 780 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 GGPS1O95749 300 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 KCNA2P16389 499 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 ADCYAP1R1P41586 468 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 ME1P48163 572 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 FXR2P51116 673 aaKnown RBP eCLIP13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 CAP1Q01518 475 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 PPP2R5CQ13362 524 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 GSE1Q14687 1217 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 CELF3Q5SZQ8 465 aaKnown RBP13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 MIS18BP1Q6P0N0 1132 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 CCDC62Q6P9F0 684 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 OR6J1Q8NGC5 347 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 NEK9Q8TD19 979 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 TTC12Q9H892 705 aaPredicted RBP13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 TFIP11Q9UBB9 837 aaKnown RBP13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 DDX20Q9UHI6 824 aaKnown RBP13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 SAMM50Q9Y512 469 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 CEP350Q5VT06 3117 aa13.24□□□□□ -0.29
SNORD3C-201ENST00000580533 KIAA1217Q5T5P2 1943 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 ELP1O95163 1332 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 KPNA6O60684 536 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 CUTAO60888 179 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 PSMD10O75832 226 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 PSAPP07602 524 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 PTMSP20962 102 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 PTPAQ15257 358 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 LY6KQ17RY6 165 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 KRT79Q5XKE5 535 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 CYFIP1Q7L576 1253 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 TLK2Q86UE8 772 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 KCTD17Q8N5Z5 321 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 PPTC7Q8NI37 304 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 HAS1Q92839 578 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 ZFP91Q96JP5 570 aaPredicted RBP13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 SPATA33Q96N06 139 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 PYM1Q9BRP8 204 aaKnown RBP13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 AZI2Q9H6S1 392 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 PDGFCQ9NRA1 345 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 PKD2L1Q9P0L9 805 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 LRWD1Q9UFC0 647 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 RCOR1Q9UKL0 485 aa13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 SRPRBQ9Y5M8 271 aaKnown RBP13.23□□□□□ -0.29
SNORD3C-201ENST00000580533 KDM3AQ9Y4C1 1321 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 VWA3AA6NCI4 1184 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 EDIL3O43854 480 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 FARP2O94887 1054 aaPredicted RBP13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 SMPD1P17405 629 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 TECP42680 631 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 SEMA3FQ13275 785 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 ITGB3BPQ13352 177 aaPredicted RBP13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 DGKDQ16760 1214 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 PRAMEF19Q5SWL8 479 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 FAM160B1Q5W0V3 765 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 NCAPH2Q6IBW4 605 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 CLEC17AQ6ZS10 378 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 MIER3Q7Z3K6 550 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 RNF180Q86T96 592 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 C4orf32Q8N8J7 132 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 ZNF579Q8NAF0 562 aaKnown RBP13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 RASSF8Q8NHQ8 419 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 SH3TC2Q8TF17 1288 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 LEO1Q8WVC0 666 aaPredicted RBP13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 SEPT1Q8WYJ6 367 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 ATP6V0A1Q93050 837 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 ARMC5Q96C12 935 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.22□□□□□ -0.293e-43■■■□□ 16.3
SNORD3C-201ENST00000580533 TMEM60Q9H2L4 133 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 XPNPEP3Q9NQH7 507 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 FAM13BQ9NYF5 915 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 PCDHA10Q9Y5I2 948 aa13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 DDX49Q9Y6V7 483 aaKnown RBP13.22□□□□□ -0.29
SNORD3C-201ENST00000580533 DDX39AO00148 427 aaKnown RBP13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 CHMP2AO43633 222 aa13.21□□□□□ -0.29
SNORD3C-201ENST00000580533 ATP9AO75110 1047 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms