RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 GTF2IRD1Q9UHL9 959 aa30.7■■■□□ 2.51
LINC00271-205ENST00000579339 LGALS2P05162 132 aa30.69■■■□□ 2.5
LINC00271-205ENST00000579339 KCNA2P16389 499 aa30.69■■■□□ 2.5
LINC00271-205ENST00000579339 MTMR1Q13613 665 aa30.69■■■□□ 2.5
LINC00271-205ENST00000579339 SENP7Q9BQF6 1050 aa30.69■■■□□ 2.5
LINC00271-205ENST00000579339 RNF26Q9BY78 433 aaPredicted RBP30.69■■■□□ 2.5
LINC00271-205ENST00000579339 JADE2Q9NQC1 790 aa30.69■■■□□ 2.5
LINC00271-205ENST00000579339 FOSP01100 380 aaPredicted RBP30.68■■■□□ 2.5
LINC00271-205ENST00000579339 AP3B2Q13367 1082 aa30.68■■■□□ 2.5
LINC00271-205ENST00000579339 GPR153Q6NV75 609 aa30.68■■■□□ 2.5
LINC00271-205ENST00000579339 PSRC1Q6PGN9 363 aaPredicted RBP30.68■■■□□ 2.5
LINC00271-205ENST00000579339 TRIM50Q86XT4 487 aa30.68■■■□□ 2.5
LINC00271-205ENST00000579339 DEFB123Q8N688 67 aa30.68■■■□□ 2.5
LINC00271-205ENST00000579339 CYP2W1Q8TAV3 490 aa30.68■■■□□ 2.5
LINC00271-205ENST00000579339 ZNF274Q96GC6 653 aaPredicted RBP30.68■■■□□ 2.5
LINC00271-205ENST00000579339 CDHR1Q96JP9 859 aa30.68■■■□□ 2.5
LINC00271-205ENST00000579339 GLT8D2Q9H1C3 349 aa30.68■■■□□ 2.5
LINC00271-205ENST00000579339 SEC24BO95487 1268 aa30.67■■■□□ 2.5
LINC00271-205ENST00000579339 ZNF200P98182 395 aaPredicted RBP30.67■■■□□ 2.5
LINC00271-205ENST00000579339 UTP14CQ5TAP6 766 aaKnown RBP30.67■■■□□ 2.5
LINC00271-205ENST00000579339 VPS54Q9P1Q0 977 aa30.67■■■□□ 2.5
LINC00271-205ENST00000579339 ESYT2A0FGR8 921 aa30.66■■■□□ 2.5
LINC00271-205ENST00000579339 ANAPC15P60006 121 aa30.66■■■□□ 2.5
LINC00271-205ENST00000579339 HIC1Q14526 733 aa30.66■■■□□ 2.5
LINC00271-205ENST00000579339 TEX2Q8IWB9 1127 aa30.66■■■□□ 2.5
LINC00271-205ENST00000579339 CCDC12Q8WUD4 166 aaPredicted RBP30.66■■■□□ 2.5
LINC00271-205ENST00000579339 DHX38Q92620 1227 aaKnown RBP30.66■■■□□ 2.5
LINC00271-205ENST00000579339 VWCEQ96DN2 955 aa30.66■■■□□ 2.5
LINC00271-205ENST00000579339 MXRA8Q9BRK3 442 aa30.66■■■□□ 2.5
LINC00271-205ENST00000579339 ZMYND12Q9H0C1 365 aa30.66■■■□□ 2.5
LINC00271-205ENST00000579339 C6orf50Q9HD87 102 aa30.66■■■□□ 2.5
LINC00271-205ENST00000579339 H3BRB1 525 aa30.65■■■□□ 2.5
LINC00271-205ENST00000579339 SREBF1P36956 1147 aa30.65■■■□□ 2.5
LINC00271-205ENST00000579339 RETREG2Q8NC44 543 aa30.65■■■□□ 2.5
LINC00271-205ENST00000579339 GIMAP8Q8ND71 665 aaPredicted RBP30.65■■■□□ 2.5
LINC00271-205ENST00000579339 RASGRP4Q8TDF6 673 aa30.65■■■□□ 2.5
LINC00271-205ENST00000579339 TUT1Q9H6E5 874 aaKnown RBP30.65■■■□□ 2.5
LINC00271-205ENST00000579339 CPLX1O14810 134 aa30.64■■■□□ 2.5
LINC00271-205ENST00000579339 BFSP2Q13515 415 aa30.64■■■□□ 2.5
LINC00271-205ENST00000579339 FAM109BQ6ICB4 259 aaPredicted RBP30.64■■■□□ 2.5
LINC00271-205ENST00000579339 OTOP2Q7RTS6 562 aa30.64■■■□□ 2.5
LINC00271-205ENST00000579339 DEFB128Q7Z7B8 93 aa30.64■■■□□ 2.5
LINC00271-205ENST00000579339 PITPNM1O00562 1244 aa30.63■■■□□ 2.49
LINC00271-205ENST00000579339 FGBP02675 491 aa30.63■■■□□ 2.49
LINC00271-205ENST00000579339 SMAD3P84022 425 aaKnown RBP30.63■■■□□ 2.49
LINC00271-205ENST00000579339 ARHGAP4P98171 946 aa30.63■■■□□ 2.49
LINC00271-205ENST00000579339 SSRP1Q08945 709 aaKnown RBP30.63■■■□□ 2.49
LINC00271-205ENST00000579339 TRIM22Q8IYM9 498 aa30.63■■■□□ 2.49
LINC00271-205ENST00000579339 REXO1Q8N1G1 1221 aaKnown RBP30.63■■■□□ 2.49
LINC00271-205ENST00000579339 KCNH7Q9NS40 1196 aa30.63■■■□□ 2.49
LINC00271-205ENST00000579339 CXXC1Q9P0U4 656 aaPredicted RBP30.63■■■□□ 2.49
LINC00271-205ENST00000579339 RBAK-RBAKDNI3L0D1 243 aa30.62■■■□□ 2.49
LINC00271-205ENST00000579339 IQCF3P0C7M6 154 aa30.62■■■□□ 2.49
LINC00271-205ENST00000579339 ARP10275 920 aa30.62■■■□□ 2.49
LINC00271-205ENST00000579339 CEP55Q53EZ4 464 aa30.62■■■□□ 2.49
LINC00271-205ENST00000579339 RASIP1Q5U651 963 aa30.62■■■□□ 2.49
LINC00271-205ENST00000579339 CCDC148Q8NFR7 591 aa30.62■■■□□ 2.49
LINC00271-205ENST00000579339 WNT8BQ93098 351 aa30.62■■■□□ 2.49
LINC00271-205ENST00000579339 FAM161BQ96MY7 647 aa30.62■■■□□ 2.49
LINC00271-205ENST00000579339 TPCN1Q9ULQ1 816 aa30.62■■■□□ 2.49
LINC00271-205ENST00000579339 SCN5AQ14524 2016 aa30.61■■■□□ 2.49
LINC00271-205ENST00000579339 DTNBO60941 627 aa30.61■■■□□ 2.49
LINC00271-205ENST00000579339 SMIM10L2AP0DMW4 78 aa30.61■■■□□ 2.49
LINC00271-205ENST00000579339 SMIM10L2BP0DMW5 78 aa30.61■■■□□ 2.49
LINC00271-205ENST00000579339 GNA11P29992 359 aa30.61■■■□□ 2.49
LINC00271-205ENST00000579339 TCF7P36402 384 aaPredicted RBP30.61■■■□□ 2.49
LINC00271-205ENST00000579339 ZNF76P36508 570 aa30.61■■■□□ 2.49
LINC00271-205ENST00000579339 RPUSD2Q8IZ73 545 aaKnown RBP30.61■■■□□ 2.49
LINC00271-205ENST00000579339 HERVK_113Q902F9 699 aa30.61■■■□□ 2.49
LINC00271-205ENST00000579339 GSTTP1A0A1W2PQM5 241 aa30.6■■■□□ 2.49
LINC00271-205ENST00000579339 GRXCR1A8MXD5 290 aa30.6■■■□□ 2.49
LINC00271-205ENST00000579339 MAFGO15525 162 aa30.6■■■□□ 2.49
LINC00271-205ENST00000579339 AK2P54819 239 aa30.6■■■□□ 2.49
LINC00271-205ENST00000579339 SCRN1Q12765 414 aa30.6■■■□□ 2.49
LINC00271-205ENST00000579339 CCDC155Q8N6L0 562 aa30.6■■■□□ 2.49
LINC00271-205ENST00000579339 CAGE1Q8TC20 777 aa30.6■■■□□ 2.49
LINC00271-205ENST00000579339 AIFM3Q96NN9 605 aa30.6■■■□□ 2.49
LINC00271-205ENST00000579339 HSFX4A0A1B0GTS1 333 aaPredicted RBP30.59■■■□□ 2.49
LINC00271-205ENST00000579339 HSFX3A0A1B0GWH4 333 aaPredicted RBP30.59■■■□□ 2.49
LINC00271-205ENST00000579339 C17orf102A2RUQ5 167 aa30.59■■■□□ 2.49
LINC00271-205ENST00000579339 CPLX2Q6PUV4 134 aaKnown RBP30.59■■■□□ 2.49
LINC00271-205ENST00000579339 AFAP1L1Q8TED9 768 aa30.59■■■□□ 2.49
LINC00271-205ENST00000579339 UIMC1Q96RL1 719 aa30.59■■■□□ 2.49
LINC00271-205ENST00000579339 SLKQ9H2G2 1235 aaPredicted RBP30.59■■■□□ 2.49
LINC00271-205ENST00000579339 AGO4Q9HCK5 861 aaKnown RBP30.59■■■□□ 2.49
LINC00271-205ENST00000579339 JPH1Q9HDC5 661 aaPredicted RBP30.59■■■□□ 2.49
LINC00271-205ENST00000579339 MTMR10Q9NXD2 777 aa30.59■■■□□ 2.49
LINC00271-205ENST00000579339 ZNF215Q9UL58 517 aaPredicted RBP30.59■■■□□ 2.49
LINC00271-205ENST00000579339 TRIP12Q14669 1992 aaPredicted RBP30.58■■■□□ 2.49
LINC00271-205ENST00000579339 FAM86B1E9PN63 330 aa30.58■■■□□ 2.49
LINC00271-205ENST00000579339 MEIS1O00470 390 aa30.58■■■□□ 2.49
LINC00271-205ENST00000579339 FAM86B2P0C5J1 330 aa30.58■■■□□ 2.49
LINC00271-205ENST00000579339 NLRP5P59047 1200 aa30.58■■■□□ 2.49
LINC00271-205ENST00000579339 PTK7Q13308 1070 aa30.58■■■□□ 2.49
LINC00271-205ENST00000579339 ZNF697Q5TEC3 545 aa30.58■■■□□ 2.49
LINC00271-205ENST00000579339 CRYGNQ8WXF5 182 aa30.58■■■□□ 2.49
LINC00271-205ENST00000579339 SEPT1Q8WYJ6 367 aa30.58■■■□□ 2.49
LINC00271-205ENST00000579339 IL17RAQ96F46 866 aa30.58■■■□□ 2.49
LINC00271-205ENST00000579339 RNPEPQ9H4A4 650 aa30.58■■■□□ 2.49
LINC00271-205ENST00000579339 TANC1Q9C0D5 1861 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms