RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 PCP11498 1178 aaKnown RBP4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 ZNF157P51786 506 aaPredicted RBP4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 EXOSC10Q01780 885 aaKnown RBP4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 KIF23Q02241 960 aaPredicted RBP4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 MSMPQ1L6U9 139 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 ABCB5Q2M3G0 1257 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 SLC35G1Q2M3R5 365 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 CERKLQ49MI3 558 aaPredicted RBP4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 FAM47AQ5JRC9 791 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 TREML2Q5T2D2 321 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 TMEM179Q6ZVK1 233 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 FAM43AQ8N2R8 423 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 CRACR2BQ8N4Y2 399 aaPredicted RBP4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 ZNF280CQ8ND82 737 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 IGDCC4Q8TDY8 1250 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 FAM46AQ96IP4 442 aaKnown RBP4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 CCDC17Q96LX7 622 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 AGXT2Q9BYV1 514 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 NACAP1Q9BZK3 213 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 KIAA1683Q9H0B3 1180 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 SMG9Q9H0W8 520 aaKnown RBP4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 R3HDMLQ9H3Y0 253 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 ANO2Q9NQ90 1003 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 MTMR4Q9NYA4 1195 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 ZSWIM5Q9P217 1185 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 NYAP2Q9P242 653 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 ABT1Q9ULW3 272 aaKnown RBP4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 SYNPO2Q9UMS6 1093 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 TMX2Q9Y320 296 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 CENPFP49454 3210 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 WDR19Q8NEZ3 1342 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 TCHHQ07283 1943 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 USP17L5A8MUK1 530 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 BTBD19C9JJ37 291 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 ZNF213O14771 459 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 CNMDO75829 334 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 MAP3K6O95382 1288 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 EEF2P13639 858 aaKnown RBP4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 VCAM1P19320 739 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 MAP2K2P36507 400 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 RBM25P49756 843 aaKnown RBP4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 NT5C2P49902 561 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 BACE1P56817 501 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 EVCP57679 992 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 TFAP4Q01664 338 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 SPP2Q13103 211 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 NOGQ13253 232 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 COL19A1Q14993 1142 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 SETDB1Q15047 1291 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 HIF1AQ16665 826 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 IMMTQ16891 758 aaKnown RBP4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 BTLAQ7Z6A9 289 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 SLC9A9Q8IVB4 645 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 FAM20CQ8IXL6 584 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 STK11IPQ8N1F8 1099 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 FBXL16Q8N461 479 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 ENAHQ8N8S7 591 aaPredicted RBP4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 GMCL1P1Q8NEA9 526 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 REPS2Q8NFH8 660 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 TTC14Q96N46 770 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 BACH2Q9BYV9 841 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 VCPKMTQ9H867 229 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 KANSL2Q9H9L4 492 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 LY9Q9HBG7 655 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 ZCCHC17Q9NP64 241 aaKnown RBP4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 CTNNA3Q9UI47 895 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 ADAMTS5Q9UNA0 930 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 CSADQ9Y600 493 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 ZHX2Q9Y6X8 837 aa4.47□□□□□ -1.69
SMARCE1-215ENST00000578995 TNKSO95271 1327 aa4.46□□□□□ -1.69
SMARCE1-215ENST00000578995 CCL15-CCL14A0A0B4J2E2 113 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 MANSC4A6NHS7 340 aaPredicted RBP4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 TRIM75PA6NK02 468 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 ZBTB42B2RXF5 422 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 C19orf81C9J6K1 198 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 USP17L10C9JJH3 530 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 SH2B2O14492 632 aaPredicted RBP4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 GPR37L1O60883 481 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 REC8O95072 547 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 NDUFB10O96000 172 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 CPA1P15085 419 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 FOSL1P15407 271 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 GRNP28799 593 aaKnown RBP4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 CTGFP29279 349 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 HOXA7P31268 230 aaPredicted RBP4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 HMGCS2P54868 508 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 GPLD1P80108 840 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 ICA1Q05084 483 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 PDE4BQ07343 736 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 ST3GAL1Q11201 340 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 TROAPQ12815 778 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 SNAPC2Q13487 334 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 TOB2Q14106 344 aaPredicted RBP4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 CPSF6Q16630 551 aaKnown RBP eCLIP4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 CCL15Q16663 113 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 SH3PXD2AQ5TCZ1 1133 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 LBX2Q6XYB7 198 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 NFXL1Q6ZNB6 911 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 MFSD6Q6ZSS7 791 aa4.46□□□□□ -1.7
SMARCE1-215ENST00000578995 BEND4Q6ZU67 534 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms