RNA–Protein interactions for RNA: ENST00000578958.1

SLC9A3R1-203, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2

Gene SLC9A3R1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-203ENST00000578958 CCDC85BQ15834 202 aaPredicted RBP20.14■□□□□ 0.81
SLC9A3R1-203ENST00000578958 UTP14CQ5TAP6 766 aaKnown RBP20.14■□□□□ 0.81
SLC9A3R1-203ENST00000578958 CTAGE1Q96RT6 745 aa20.14■□□□□ 0.81
SLC9A3R1-203ENST00000578958 NAP1L2Q9ULW6 460 aaPredicted RBP20.14■□□□□ 0.81
SLC9A3R1-203ENST00000578958 TANC1Q9C0D5 1861 aa20.13■□□□□ 0.81
SLC9A3R1-203ENST00000578958 ZBTB43O43298 467 aa20.13■□□□□ 0.81
SLC9A3R1-203ENST00000578958 TLL1O43897 1013 aa20.13■□□□□ 0.81
SLC9A3R1-203ENST00000578958 SMIM10L2AP0DMW4 78 aa20.13■□□□□ 0.81
SLC9A3R1-203ENST00000578958 SMIM10L2BP0DMW5 78 aa20.13■□□□□ 0.81
SLC9A3R1-203ENST00000578958 IKBKEQ14164 716 aa20.13■□□□□ 0.81
SLC9A3R1-203ENST00000578958 ZNF618Q5T7W0 954 aa20.13■□□□□ 0.81
SLC9A3R1-203ENST00000578958 DHX32Q7L7V1 743 aaKnown RBP20.13■□□□□ 0.81
SLC9A3R1-203ENST00000578958 SYMPKQ92797 1274 aaKnown RBP20.13■□□□□ 0.81
SLC9A3R1-203ENST00000578958 CCDC136Q96JN2 1154 aa20.13■□□□□ 0.81
SLC9A3R1-203ENST00000578958 SENP7Q9BQF6 1050 aa20.13■□□□□ 0.81
SLC9A3R1-203ENST00000578958 TSPYL2Q9H2G4 693 aaPredicted RBP20.13■□□□□ 0.81
SLC9A3R1-203ENST00000578958 TRIP12Q14669 1992 aaPredicted RBP20.12■□□□□ 0.81
SLC9A3R1-203ENST00000578958 EMSYQ7Z589 1322 aa20.12■□□□□ 0.81
SLC9A3R1-203ENST00000578958 ABHD14A-ACY1A0A1B0GW23 586 aa20.12■□□□□ 0.81
SLC9A3R1-203ENST00000578958 EFCAB14O75071 495 aa20.12■□□□□ 0.81
SLC9A3R1-203ENST00000578958 COL9A3Q14050 684 aaPredicted RBP20.12■□□□□ 0.81
SLC9A3R1-203ENST00000578958 ADGRE1Q14246 886 aa20.12■□□□□ 0.81
SLC9A3R1-203ENST00000578958 UBE2SQ16763 222 aa20.12■□□□□ 0.81
SLC9A3R1-203ENST00000578958 RTN1Q16799 776 aa20.12■□□□□ 0.81
SLC9A3R1-203ENST00000578958 APOA5Q6Q788 366 aa20.12■□□□□ 0.81
SLC9A3R1-203ENST00000578958 MICALL1Q8N3F8 863 aa20.12■□□□□ 0.81
SLC9A3R1-203ENST00000578958 USP38Q8NB14 1042 aa20.12■□□□□ 0.81
SLC9A3R1-203ENST00000578958 GPR20Q99678 358 aa20.12■□□□□ 0.81
SLC9A3R1-203ENST00000578958 BCAS3Q9H6U6 928 aa20.12■□□□□ 0.81
SLC9A3R1-203ENST00000578958 CERS4Q9HA82 394 aa20.12■□□□□ 0.81
SLC9A3R1-203ENST00000578958 GBF1Q92538 1859 aa20.11■□□□□ 0.81
SLC9A3R1-203ENST00000578958 RSPH10B2B2RC85 870 aa20.11■□□□□ 0.81
SLC9A3R1-203ENST00000578958 GTPBP6O43824 516 aaPredicted RBP20.11■□□□□ 0.81
SLC9A3R1-203ENST00000578958 NBNO60934 754 aa20.11■□□□□ 0.81
SLC9A3R1-203ENST00000578958 CXCL10P02778 98 aa20.11■□□□□ 0.81
SLC9A3R1-203ENST00000578958 HMGB1P09429 215 aaKnown RBP20.11■□□□□ 0.81
SLC9A3R1-203ENST00000578958 RSPH10BP0C881 870 aa20.11■□□□□ 0.81
SLC9A3R1-203ENST00000578958 NAPAP54920 295 aa20.11■□□□□ 0.81
SLC9A3R1-203ENST00000578958 WDR5P61964 334 aaKnown RBP20.11■□□□□ 0.81
SLC9A3R1-203ENST00000578958 SEMA3FQ13275 785 aa20.11■□□□□ 0.81
SLC9A3R1-203ENST00000578958 GPRASP2Q96D09 838 aa20.11■□□□□ 0.81
SLC9A3R1-203ENST00000578958 TCEANC2Q96MN5 208 aa20.11■□□□□ 0.81
SLC9A3R1-203ENST00000578958 PCDHA6Q9UN73 950 aa20.11■□□□□ 0.81
SLC9A3R1-203ENST00000578958 PCDHA8Q9Y5H6 950 aa20.11■□□□□ 0.81
SLC9A3R1-203ENST00000578958 MYO9BQ13459 2157 aa20.11■□□□□ 0.81
SLC9A3R1-203ENST00000578958 PRUNE2Q8WUY3 3088 aa20.11■□□□□ 0.81
SLC9A3R1-203ENST00000578958 GOLGA8AA7E2F4 631 aa20.1■□□□□ 0.81
SLC9A3R1-203ENST00000578958 GOLGA8BA8MQT2 603 aa20.1■□□□□ 0.81
SLC9A3R1-203ENST00000578958 MTMR1Q13613 665 aa20.1■□□□□ 0.81
SLC9A3R1-203ENST00000578958 SERINC5Q86VE9 423 aa20.1■□□□□ 0.81
SLC9A3R1-203ENST00000578958 ARNTL2Q8WYA1 636 aa20.1■□□□□ 0.81
SLC9A3R1-203ENST00000578958 RNPEPQ9H4A4 650 aa20.1■□□□□ 0.81
SLC9A3R1-203ENST00000578958 PKD2L1Q9P0L9 805 aa20.1■□□□□ 0.81
SLC9A3R1-203ENST00000578958 KLF18A0A0U1RQI7 1052 aa20.09■□□□□ 0.81
SLC9A3R1-203ENST00000578958 TREHO43280 583 aa20.09■□□□□ 0.81
SLC9A3R1-203ENST00000578958 LGR5O75473 907 aa20.09■□□□□ 0.81
SLC9A3R1-203ENST00000578958 EXOSC10Q01780 885 aaKnown RBP20.09■□□□□ 0.81
SLC9A3R1-203ENST00000578958 HIC1Q14526 733 aa20.09■□□□□ 0.81
SLC9A3R1-203ENST00000578958 GPNMBQ14956 572 aa20.09■□□□□ 0.81
SLC9A3R1-203ENST00000578958 TRIM71Q2Q1W2 868 aaKnown RBP20.09■□□□□ 0.81
SLC9A3R1-203ENST00000578958 TSGA10IPQ3SY00 556 aa20.09■□□□□ 0.81
SLC9A3R1-203ENST00000578958 TRIM50Q86XT4 487 aa20.09■□□□□ 0.81
SLC9A3R1-203ENST00000578958 IL27Q8NEV9 243 aa20.09■□□□□ 0.81
SLC9A3R1-203ENST00000578958 WNT8BQ93098 351 aa20.09■□□□□ 0.81
SLC9A3R1-203ENST00000578958 SETD4Q9NVD3 440 aa20.09■□□□□ 0.81
SLC9A3R1-203ENST00000578958 THEGQ9P2T0 379 aa20.09■□□□□ 0.81
SLC9A3R1-203ENST00000578958 CHD9Q3L8U1 2897 aa20.09■□□□□ 0.81
SLC9A3R1-203ENST00000578958 MAFGO15525 162 aa20.08■□□□□ 0.81
SLC9A3R1-203ENST00000578958 ARHGAP4P98171 946 aa20.08■□□□□ 0.81
SLC9A3R1-203ENST00000578958 SKIV2LQ15477 1246 aaKnown RBP20.08■□□□□ 0.81
SLC9A3R1-203ENST00000578958 ADCK5Q3MIX3 580 aa20.08■□□□□ 0.81
SLC9A3R1-203ENST00000578958 TJAP1Q5JTD0 557 aa20.08■□□□□ 0.81
SLC9A3R1-203ENST00000578958 RASEFQ8IZ41 740 aa20.08■□□□□ 0.81
SLC9A3R1-203ENST00000578958 SEPT1Q8WYJ6 367 aa20.08■□□□□ 0.81
SLC9A3R1-203ENST00000578958 BRPF3Q9ULD4 1205 aa20.08■□□□□ 0.81
SLC9A3R1-203ENST00000578958 V9GY48 417 aaPredicted RBP20.08■□□□□ 0.81
SLC9A3R1-203ENST00000578958 CAND2O75155 1236 aa20.07■□□□□ 0.8
SLC9A3R1-203ENST00000578958 CTSHP09668 335 aa20.07■□□□□ 0.8
SLC9A3R1-203ENST00000578958 TCF7P36402 384 aaPredicted RBP20.07■□□□□ 0.8
SLC9A3R1-203ENST00000578958 ADCY7P51828 1080 aa20.07■□□□□ 0.8
SLC9A3R1-203ENST00000578958 DEFB103AP81534 67 aa20.07■□□□□ 0.8
SLC9A3R1-203ENST00000578958 TAP1Q03518 808 aa20.07■□□□□ 0.8
SLC9A3R1-203ENST00000578958 WWC2Q6AWC2 1192 aa20.07■□□□□ 0.8
SLC9A3R1-203ENST00000578958 PPP1R18Q6NYC8 613 aa20.07■□□□□ 0.8
SLC9A3R1-203ENST00000578958 FAM117BQ6P1L5 589 aa20.07■□□□□ 0.8
SLC9A3R1-203ENST00000578958 GLG1Q92896 1179 aa20.07■□□□□ 0.8
SLC9A3R1-203ENST00000578958 JADE2Q9NQC1 790 aa20.07■□□□□ 0.8
SLC9A3R1-203ENST00000578958 PRDM6Q9NQX0 595 aa20.07■□□□□ 0.8
SLC9A3R1-203ENST00000578958 TET1Q8NFU7 2136 aa20.06■□□□□ 0.8
SLC9A3R1-203ENST00000578958 CNTNAP5Q8WYK1 1306 aa20.06■□□□□ 0.8
SLC9A3R1-203ENST00000578958 NRCAMQ92823 1304 aa20.06■□□□□ 0.8
SLC9A3R1-203ENST00000578958 CCDC196A0A1B0GTZ2 297 aa20.06■□□□□ 0.8
SLC9A3R1-203ENST00000578958 hCG_1984214I3L0E3 225 aa20.06■□□□□ 0.8
SLC9A3R1-203ENST00000578958 RFXAPO00287 272 aa20.06■□□□□ 0.8
SLC9A3R1-203ENST00000578958 ATP9AO75110 1047 aa20.06■□□□□ 0.8
SLC9A3R1-203ENST00000578958 FOSP01100 380 aaPredicted RBP20.06■□□□□ 0.8
SLC9A3R1-203ENST00000578958 AMHP03971 560 aa20.06■□□□□ 0.8
SLC9A3R1-203ENST00000578958 KCNA2P16389 499 aa20.06■□□□□ 0.8
SLC9A3R1-203ENST00000578958 ITGB5P18084 799 aa20.06■□□□□ 0.8
SLC9A3R1-203ENST00000578958 TMCO2Q7Z6W1 182 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms