RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 GH1P01241 217 aa8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 TXNP10599 105 aaKnown RBP8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 CASTP20810 708 aaKnown RBP8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 SDHBP21912 280 aa8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 MCCP23508 829 aa8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 PLEKHG4Q58EX7 1191 aa8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 CCDC62Q6P9F0 684 aa8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 BTNL9Q6UXG8 535 aa8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 PPP1R13LQ8WUF5 828 aa8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 AFG1LQ8WV93 481 aa8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 PURBQ96QR8 312 aaKnown RBP8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 RTKNQ9BST9 563 aa8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 C11orf84Q9BUA3 381 aaPredicted RBP8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 BOLA2Q9H3K6 86 aa8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 EPB41L4AQ9HCS5 686 aaPredicted RBP8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 ANGPTL2Q9UKU9 493 aa8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 DDX19BQ9UMR2 479 aa8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 ZNF462Q96JM2 2506 aa8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 WDR19Q8NEZ3 1342 aa8.47□□□□□ -1.05
CDK5RAP3-209ENST00000578663 PTPDC1A2A3K4 754 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 HAS3O00219 553 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 RAB11FIP3O75154 756 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 CAND2O75155 1236 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PRDM1O75626 825 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 ARIH2O95376 493 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 CHGBP05060 677 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 HOXD8P13378 290 aaPredicted RBP8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 TDO2P48775 406 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 RING1Q06587 406 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PDE4BQ07343 736 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 ARHGAP1Q07960 439 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 DGKDQ16760 1214 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PPM1JQ5JR12 505 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 ZNF618Q5T7W0 954 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 CWF19L1Q69YN2 538 aaKnown RBP8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 SLC30A10Q6XR72 485 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 RNF207Q6ZRF8 634 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 KCTD1Q719H9 257 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 CCDC105Q8IYK2 499 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 C7orf31Q8N865 590 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 DBF4BQ8NFT6 615 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 DCAF4Q8WV16 495 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 APPBP2Q92624 585 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 COPS5Q92905 334 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 TOP1MTQ969P6 601 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PPP2R3CQ969Q6 453 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 EMID1Q96A84 441 aaPredicted RBP8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 HDAC6Q9UBN7 1215 aa8.46□□□□□ -1.06
CDK5RAP3-209ENST00000578663 LAMA5O15230 3695 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PI15O43692 258 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 MMP1P03956 469 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 SLC3A2P08195 630 aaKnown RBP8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PMLP29590 882 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 CTNNB1P35222 781 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 NOVP48745 357 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PSEN2P49810 448 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 CLCN5P51795 746 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 RPS6P62753 249 aaKnown RBP8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 SERINC5Q86VE9 423 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 STK11IPQ8N1F8 1099 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 SUMF1Q8NBK3 374 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 SMRP1Q8NCR6 262 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 RGS22Q8NE09 1264 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 EXOC6Q8TAG9 804 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 CLEC4DQ8WXI8 215 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 SEPT8Q92599 483 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 RPGRIP1Q96KN7 1286 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PHF7Q9BWX1 381 aaPredicted RBP8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 SMOC2Q9H3U7 446 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 CDV3Q9UKY7 258 aaKnown RBP8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 LHX6Q9UPM6 363 aa8.45□□□□□ -1.06
CDK5RAP3-209ENST00000578663 KIAA1217Q5T5P2 1943 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 RSPH10B2B2RC85 870 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 GPAA1O43292 621 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 HMMRO75330 724 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 BRD1O95696 1058 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 ZFYP08048 801 aaPredicted RBP8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 LINC00271P0C7V0 271 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 RSPH10BP0C881 870 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 CALML3P27482 149 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 HOXC8P31273 242 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 BMPR1AP36894 532 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 CHMP4BP1P59074 171 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 SNAP25P60880 206 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 TFAP4Q01664 338 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 COASYQ13057 564 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 ADAM15Q13444 863 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 MFSD10Q14728 455 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 CCDC96Q2M329 555 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 SOWAHCQ53LP3 525 aaPredicted RBP8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 SYDE2Q5VT97 1194 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 FIBCD1Q8N539 461 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 KBTBD3Q8NAB2 608 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PPTC7Q8NI37 304 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 APBB2Q92870 758 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 CLP1Q92989 425 aaKnown RBP8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 WNT8BQ93098 351 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 OSBP2Q969R2 916 aa8.44□□□□□ -1.06
CDK5RAP3-209ENST00000578663 PLVAPQ9BX97 442 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms