RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 SEPT4O43236 478 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 ADCY6O43306 1168 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 CHMP2AO43633 222 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 GAS7O60861 476 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 YEATS4O95619 227 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 SMPD1P17405 629 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 MARCKSP29966 332 aaPredicted RBP13.71□□□□□ -0.21
IFT20-207ENST00000578547 NASPP49321 788 aaPredicted RBP13.71□□□□□ -0.21
IFT20-207ENST00000578547 ATP2C1P98194 919 aaPredicted RBP13.71□□□□□ -0.21
IFT20-207ENST00000578547 SP2Q02086 613 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 PTPAQ15257 358 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 CCDC62Q6P9F0 684 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 CYFIP1Q7L576 1253 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 C4orf32Q8N8J7 132 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 SLC5A5Q92911 643 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 SPATA32Q96LK8 384 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 FAM20AQ96MK3 541 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 MTMR9Q96QG7 549 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 TEKT3Q9BXF9 490 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 BCAS3Q9H6U6 928 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 GDPD2Q9HCC8 539 aa13.71□□□□□ -0.21
IFT20-207ENST00000578547 DDX41Q9UJV9 622 aaKnown RBP13.71□□□□□ -0.21
IFT20-207ENST00000578547 DOCK5Q9H7D0 1870 aa13.7□□□□□ -0.22
IFT20-207ENST00000578547 LAD1O00515 517 aa13.7□□□□□ -0.22
IFT20-207ENST00000578547 SPTLC2O15270 562 aa13.7□□□□□ -0.22
IFT20-207ENST00000578547 GH1P01241 217 aa13.7□□□□□ -0.22
IFT20-207ENST00000578547 TGFB3P10600 412 aa13.7□□□□□ -0.22
IFT20-207ENST00000578547 NEDD9Q14511 834 aa13.7□□□□□ -0.22
IFT20-207ENST00000578547 SLC39A14Q15043 492 aa13.7□□□□□ -0.22
IFT20-207ENST00000578547 TMEM266Q2M3C6 531 aa13.7□□□□□ -0.22
IFT20-207ENST00000578547 DUSP28Q4G0W2 176 aa13.7□□□□□ -0.22
IFT20-207ENST00000578547 LHX8Q68G74 356 aa13.7□□□□□ -0.22
IFT20-207ENST00000578547 TLK2Q86UE8 772 aa13.7□□□□□ -0.22
IFT20-207ENST00000578547 DHX37Q8IY37 1157 aaKnown RBP13.7□□□□□ -0.22
IFT20-207ENST00000578547 LINC00301Q8NCQ3 95 aa13.7□□□□□ -0.22
IFT20-207ENST00000578547 GIMAP8Q8ND71 665 aaPredicted RBP13.7□□□□□ -0.22
IFT20-207ENST00000578547 OR6J1Q8NGC5 347 aa13.7□□□□□ -0.22
IFT20-207ENST00000578547 RIT2Q99578 217 aa13.7□□□□□ -0.22
IFT20-207ENST00000578547 TTC12Q9H892 705 aaPredicted RBP13.7□□□□□ -0.22
IFT20-207ENST00000578547 MLXIPQ9HAP2 919 aa13.7□□□□□ -0.22
IFT20-207ENST00000578547 JPH1Q9HDC5 661 aaPredicted RBP13.7□□□□□ -0.22
IFT20-207ENST00000578547 PAK6Q9NQU5 681 aaPredicted RBP13.7□□□□□ -0.22
IFT20-207ENST00000578547 TBC1D22BQ9NU19 505 aa13.7□□□□□ -0.22
IFT20-207ENST00000578547 DDX20Q9UHI6 824 aaKnown RBP13.7□□□□□ -0.22
IFT20-207ENST00000578547 NFASCO94856 1347 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 VWA3AA6NCI4 1184 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 PSMD10O75832 226 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
IFT20-207ENST00000578547 RARBP10826 455 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 TECP42680 631 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 ARHGAP1Q07960 439 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 TPRNQ4KMQ1 711 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 CELF3Q5SZQ8 465 aaKnown RBP13.69□□□□□ -0.22
IFT20-207ENST00000578547 NCAPH2Q6IBW4 605 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 DTHD1Q6ZMT9 781 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 KCNG4Q8TDN1 519 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 LEO1Q8WVC0 666 aaPredicted RBP13.69□□□□□ -0.22
IFT20-207ENST00000578547 ABHD8Q96I13 439 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 DEFB118Q96PH6 123 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 SENP7Q9BQF6 1050 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 SCAND2PQ9GZW5 306 aaPredicted RBP13.69□□□□□ -0.22
IFT20-207ENST00000578547 AP5M1Q9H0R1 490 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 UNC45AQ9H3U1 944 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 SLC9A2Q9UBY0 812 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 PCDHA12Q9UN75 941 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 GNEQ9Y223 722 aaKnown RBP13.69□□□□□ -0.22
IFT20-207ENST00000578547 TELO2Q9Y4R8 837 aa13.69□□□□□ -0.22
IFT20-207ENST00000578547 POTEFA5A3E0 1075 aa13.68□□□□□ -0.22
IFT20-207ENST00000578547 POTEMA6NI47 508 aa13.68□□□□□ -0.22
IFT20-207ENST00000578547 NOP56O00567 594 aaKnown RBP13.68□□□□□ -0.22
IFT20-207ENST00000578547 NKRFO15226 690 aaKnown RBP eCLIP13.68□□□□□ -0.22
IFT20-207ENST00000578547 DHX15O43143 795 aaKnown RBP13.68□□□□□ -0.22
IFT20-207ENST00000578547 DYNC1LI2O43237 492 aaPredicted RBP13.68□□□□□ -0.22
IFT20-207ENST00000578547 DUSP11O75319 330 aaKnown RBP13.68□□□□□ -0.22
IFT20-207ENST00000578547 FARP2O94887 1054 aaPredicted RBP13.68□□□□□ -0.22
IFT20-207ENST00000578547 PRPHP41219 470 aa13.68□□□□□ -0.22
IFT20-207ENST00000578547 ME1P48163 572 aa13.68□□□□□ -0.22
IFT20-207ENST00000578547 IRX5P78411 483 aaPredicted RBP13.68□□□□□ -0.22
IFT20-207ENST00000578547 KRT76Q01546 638 aa13.68□□□□□ -0.22
IFT20-207ENST00000578547 GRIN1Q05586 938 aa13.68□□□□□ -0.22
IFT20-207ENST00000578547 IL17AQ16552 155 aa13.68□□□□□ -0.22
IFT20-207ENST00000578547 ARL6IP4Q66PJ3 421 aaKnown RBP13.68□□□□□ -0.22
IFT20-207ENST00000578547 METTL7BQ6UX53 244 aa13.68□□□□□ -0.22
IFT20-207ENST00000578547 TNS4Q8IZW8 715 aa13.68□□□□□ -0.22
IFT20-207ENST00000578547 KRI1Q8N9T8 703 aaKnown RBP13.68□□□□□ -0.22
IFT20-207ENST00000578547 SPATA33Q96N06 139 aa13.68□□□□□ -0.22
IFT20-207ENST00000578547 CLIC6Q96NY7 704 aa13.68□□□□□ -0.22
IFT20-207ENST00000578547 XPNPEP3Q9NQH7 507 aa13.68□□□□□ -0.22
IFT20-207ENST00000578547 FBXO2Q9UK22 296 aaPredicted RBP13.68□□□□□ -0.22
IFT20-207ENST00000578547 VAV3Q9UKW4 847 aa13.68□□□□□ -0.22
IFT20-207ENST00000578547 SAMM50Q9Y512 469 aa13.68□□□□□ -0.22
IFT20-207ENST00000578547 SYNRGQ9UMZ2 1314 aa13.67□□□□□ -0.22
IFT20-207ENST00000578547 MSCO60682 206 aa13.67□□□□□ -0.22
IFT20-207ENST00000578547 CCNE2O96020 404 aa13.67□□□□□ -0.22
IFT20-207ENST00000578547 GJB1P08034 283 aa13.67□□□□□ -0.22
IFT20-207ENST00000578547 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
IFT20-207ENST00000578547 ACTR2P61160 394 aa13.67□□□□□ -0.22
IFT20-207ENST00000578547 LAMC2Q13753 1193 aa13.67□□□□□ -0.22
IFT20-207ENST00000578547 MIER3Q7Z3K6 550 aa13.67□□□□□ -0.22
IFT20-207ENST00000578547 AFG1LQ8WV93 481 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms