RNA–Protein interactions for RNA: ENST00000578348.5

GGA3-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-205ENST00000578348 RAD21O60216 631 aa12.66□□□□□ -0.38
GGA3-205ENST00000578348 SYF2O95926 243 aaKnown RBP12.66□□□□□ -0.38
GGA3-205ENST00000578348 AMPD3Q01432 767 aa12.66□□□□□ -0.38
GGA3-205ENST00000578348 KLRC3Q07444 240 aa12.66□□□□□ -0.38
GGA3-205ENST00000578348 C2orf54Q08AI8 447 aa12.66□□□□□ -0.38
GGA3-205ENST00000578348 PDIA5Q14554 519 aa12.66□□□□□ -0.38
GGA3-205ENST00000578348 MCTP2Q6DN12 878 aa12.66□□□□□ -0.38
GGA3-205ENST00000578348 SMCR8Q8TEV9 937 aaPredicted RBP12.66□□□□□ -0.38
GGA3-205ENST00000578348 C7orf25Q9BPX7 421 aa12.66□□□□□ -0.38
GGA3-205ENST00000578348 HINFPQ9BQA5 517 aa12.66□□□□□ -0.38
GGA3-205ENST00000578348 PDGFDQ9GZP0 370 aaPredicted RBP12.66□□□□□ -0.38
GGA3-205ENST00000578348 VIPAS39Q9H9C1 493 aa12.66□□□□□ -0.38
GGA3-205ENST00000578348 SLC39A2Q9NP94 309 aa12.66□□□□□ -0.38
GGA3-205ENST00000578348 HPCAL4Q9UM19 191 aa12.66□□□□□ -0.38
GGA3-205ENST00000578348 COL4A5P29400 1685 aa12.66□□□□□ -0.38
GGA3-205ENST00000578348 ANO9A1A5B4 782 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 TARSL2A2RTX5 802 aaKnown RBP12.65□□□□□ -0.38
GGA3-205ENST00000578348 MYO1CO00159 1063 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 ZNF263O14978 683 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 NDUFB10O96000 172 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 GH2P01242 217 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 MYBL2P10244 700 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 DPEP1P16444 411 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 VAV2P52735 878 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 DLGAP5Q15398 846 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 SPA17Q15506 151 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 FOXR1Q6PIV2 292 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 GPIHBP1Q8IV16 184 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 GOLGA6L1Q8N7Z2 621 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 KIAA0895Q8NCT3 520 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 FAM151AQ8WW52 585 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 RIN2Q8WYP3 895 aaPredicted RBP12.65□□□□□ -0.38
GGA3-205ENST00000578348 DRC1Q96MC2 740 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 ZNF70Q9UC06 446 aaPredicted RBP12.65□□□□□ -0.38
GGA3-205ENST00000578348 RAD17O75943 681 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 IVLP07476 585 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 KCNA3P22001 575 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 PPP1R2P41236 205 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 CNNM4Q6P4Q7 775 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 SRLQ86TD4 932 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 C10orf67Q8IYJ2 551 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 COG1Q8WTW3 980 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 PURBQ96QR8 312 aaKnown RBP12.65□□□□□ -0.38
GGA3-205ENST00000578348 ERGIC2Q96RQ1 377 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 SEMA6BQ9H3T3 888 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.65□□□□□ -0.38
GGA3-205ENST00000578348 ZNF277Q9NRM2 450 aaPredicted RBP12.65□□□□□ -0.38
GGA3-205ENST00000578348 FAM207AQ9NSI2 230 aaPredicted RBP12.65□□□□□ -0.38
GGA3-205ENST00000578348 DDX25Q9UHL0 483 aaKnown RBP12.65□□□□□ -0.38
GGA3-205ENST00000578348 PCDHA1Q9Y5I3 950 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 MYH7BA7E2Y1 1941 aa12.65□□□□□ -0.38
GGA3-205ENST00000578348 A0A1W2PQJ5 194 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 TRIM66O15016 1216 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 ERCC3P19447 782 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 AARSP49588 968 aaKnown RBP eCLIP12.64□□□□□ -0.39
GGA3-205ENST00000578348 GRB10Q13322 594 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 AP3B2Q13367 1082 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 SPDYE2Q495Y8 402 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 SYDE2Q5VT97 1194 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 HOMEZQ8IX15 550 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 OGFOD1Q8N543 542 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 IFIH1Q9BYX4 1025 aaKnown RBP12.64□□□□□ -0.39
GGA3-205ENST00000578348 RRP15Q9Y3B9 282 aaKnown RBP12.64□□□□□ -0.39
GGA3-205ENST00000578348 CAPN6Q9Y6Q1 641 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 TCP10L2B9ZVM9 353 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 EPHB6O15197 1021 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 BMP3P12645 472 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 JAG1P78504 1218 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 FIGNQ5HY92 759 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 FKBP1CQ5VVH2 108 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 BTNL9Q6UXG8 535 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 AFAP1L1Q8TED9 768 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 CDK5RAP3Q96JB5 506 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 PNMA5Q96PV4 448 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 CRACR2AQ9BSW2 395 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 SELENOOQ9BVL4 669 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 AMNQ9BXJ7 453 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 TSGA10Q9BZW7 698 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 DEF6Q9H4E7 631 aa12.64□□□□□ -0.39
GGA3-205ENST00000578348 CLRN2A0PK11 232 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 USO1O60763 962 aaKnown RBP12.63□□□□□ -0.39
GGA3-205ENST00000578348 PRPF6O94906 941 aaKnown RBP12.63□□□□□ -0.39
GGA3-205ENST00000578348 GGCXP38435 758 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 USP11P51784 963 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 CDK17Q00537 523 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 RRP1BQ14684 758 aaKnown RBP12.63□□□□□ -0.39
GGA3-205ENST00000578348 KRT79Q5XKE5 535 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 IQCEQ6IPM2 695 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 MOXD1Q6UVY6 613 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 CCNI2Q6ZMN8 369 aaPredicted RBP12.63□□□□□ -0.39
GGA3-205ENST00000578348 SV2BQ7L1I2 683 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 DYMQ7RTS9 669 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 FBXO11Q86XK2 927 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 NIM1KQ8IY84 436 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 MTMR14Q8NCE2 650 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 AGBL3Q8NEM8 1001 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 TRIM58Q8NG06 486 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 ANO3Q9BYT9 981 aa12.63□□□□□ -0.39
GGA3-205ENST00000578348 MMRN2Q9H8L6 949 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms