RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 DDX12PQ92771 950 aa9.18□□□□□ -0.94
SKA2-203ENST00000578105 CNOT6LQ96LI5 555 aaKnown RBP9.18□□□□□ -0.94
SKA2-203ENST00000578105 POLR3CQ9BUI4 534 aaPredicted RBP9.18□□□□□ -0.94
SKA2-203ENST00000578105 NOC4LQ9BVI4 516 aaKnown RBP9.18□□□□□ -0.94
SKA2-203ENST00000578105 TSGA10Q9BZW7 698 aa9.18□□□□□ -0.94
SKA2-203ENST00000578105 TDRD3Q9H7E2 651 aaKnown RBP9.18□□□□□ -0.94
SKA2-203ENST00000578105 KCND2Q9NZV8 630 aa9.18□□□□□ -0.94
SKA2-203ENST00000578105 ZNF70Q9UC06 446 aaPredicted RBP9.18□□□□□ -0.94
SKA2-203ENST00000578105 ZNF215Q9UL58 517 aaPredicted RBP9.18□□□□□ -0.94
SKA2-203ENST00000578105 DAAM1Q9Y4D1 1078 aa9.18□□□□□ -0.94
SKA2-203ENST00000578105 YDJCA8MPS7 323 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 GH2P01242 217 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 ASNSP08243 561 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 TRIM21P19474 475 aaKnown RBP9.17□□□□□ -0.94
SKA2-203ENST00000578105 CHRNA5P30532 468 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 SLC16A2P36021 539 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 FXR1P51114 621 aaKnown RBP eCLIP9.17□□□□□ -0.94
SKA2-203ENST00000578105 FAM193AP78312 1265 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 RBM10P98175 930 aaKnown RBP9.17□□□□□ -0.94
SKA2-203ENST00000578105 TNFAIP1Q13829 316 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 MCM6Q14566 821 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 VWA3BQ502W6 1294 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 FAM26FQ5R3K3 315 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 ANKRD40Q6AI12 368 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 TOGARAM2Q6ZUX3 1019 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 KRT26Q7Z3Y9 468 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 ZC3H3Q8IXZ2 948 aaKnown RBP9.17□□□□□ -0.94
SKA2-203ENST00000578105 NIM1KQ8IY84 436 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 LARGE2Q8N3Y3 721 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 SYT2Q8N9I0 419 aaPredicted RBP9.17□□□□□ -0.94
SKA2-203ENST00000578105 ETNPPLQ8TBG4 499 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 DNAJC19Q96DA6 116 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 PRMT6Q96LA8 375 aaPredicted RBP9.17□□□□□ -0.94
SKA2-203ENST00000578105 TTYH3Q9C0H2 523 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 RANBP17Q9H2T7 1088 aaKnown RBP9.17□□□□□ -0.94
SKA2-203ENST00000578105 VCPKMTQ9H867 229 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 TUFT1Q9NNX1 390 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 PANK4Q9NVE7 773 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 FEM1BQ9UK73 627 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 ZNRF3Q9ULT6 936 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 DNM3Q9UQ16 869 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 VPS9D1Q9Y2B5 631 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 MRFAP1Q9Y605 127 aa9.17□□□□□ -0.94
SKA2-203ENST00000578105 EPN1Q9Y6I3 576 aaPredicted RBP9.17□□□□□ -0.94
SKA2-203ENST00000578105 UBE4BO95155 1302 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 LOXHD1Q8IVV2 1947 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 TTC26A0AVF1 554 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 CTAGE9A4FU28 777 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 TRIM49BA6NDI0 452 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 SOWAHDA6NJG2 315 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 EIF3CLB5ME19 914 aaKnown RBP9.16□□□□□ -0.94
SKA2-203ENST00000578105 GCOM1H8Y6P7 765 aaPredicted RBP9.16□□□□□ -0.94
SKA2-203ENST00000578105 KRT86O43790 486 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 C21orf2O43822 256 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 URI1O94763 535 aaPredicted RBP9.16□□□□□ -0.94
SKA2-203ENST00000578105 NDUFA10O95299 355 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 PLA2G4BP0C869 781 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 POLR2MP0CAP2 368 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 GAP43P17677 238 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 PMS1P54277 932 aaKnown RBP9.16□□□□□ -0.94
SKA2-203ENST00000578105 GHRHRQ02643 423 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 COASYQ13057 564 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 IKQ13123 557 aaPredicted RBP9.16□□□□□ -0.94
SKA2-203ENST00000578105 TNIP1Q15025 636 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 EZH2Q15910 746 aaKnown RBP9.16□□□□□ -0.94
SKA2-203ENST00000578105 WHAMMP3Q1A5X7 153 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 KIF4BQ2VIQ3 1234 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 ZCWPW2Q504Y3 356 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 RAD9BQ6WBX8 426 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 NIPA1Q7RTP0 329 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 CLEC10AQ8IUN9 316 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 FMNL3Q8IVF7 1028 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 GPR161Q8N6U8 529 aaKnown RBP9.16□□□□□ -0.94
SKA2-203ENST00000578105 LRRC15Q8TF66 581 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 LPAR1Q92633 364 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 SYN2Q92777 582 aaPredicted RBP9.16□□□□□ -0.94
SKA2-203ENST00000578105 HOOK2Q96ED9 719 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 ZBED3Q96IU2 234 aaPredicted RBP9.16□□□□□ -0.94
SKA2-203ENST00000578105 RPGRIP1Q96KN7 1286 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 EIF3CQ99613 913 aaKnown RBP9.16□□□□□ -0.94
SKA2-203ENST00000578105 WDR11Q9BZH6 1224 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 NDST4Q9H3R1 872 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 LUC7LQ9NQ29 371 aaKnown RBP9.16□□□□□ -0.94
SKA2-203ENST00000578105 OGFRQ9NZT2 677 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 SEL1LQ9UBV2 794 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 ZBTB21Q9ULJ3 1066 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 PRR12Q9ULL5 1215 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 PLAGL2Q9UPG8 496 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 COL4A3BPQ9Y5P4 624 aa9.16□□□□□ -0.94
SKA2-203ENST00000578105 ATP8B3O60423 1300 aa9.15□□□□□ -0.94
SKA2-203ENST00000578105 SSU72P8A0A1W2PR75 194 aa9.15□□□□□ -0.94
SKA2-203ENST00000578105 ANO9A1A5B4 782 aa9.15□□□□□ -0.94
SKA2-203ENST00000578105 USP17L15C9J2P7 530 aa9.15□□□□□ -0.94
SKA2-203ENST00000578105 USP17L13C9JLJ4 530 aa9.15□□□□□ -0.94
SKA2-203ENST00000578105 USP17L11C9JVI0 530 aa9.15□□□□□ -0.94
SKA2-203ENST00000578105 USP17L18D6R9N7 530 aa9.15□□□□□ -0.94
SKA2-203ENST00000578105 USP17L22D6RA61 530 aa9.15□□□□□ -0.94
SKA2-203ENST00000578105 USP17L17D6RBQ6 530 aa9.15□□□□□ -0.94
SKA2-203ENST00000578105 USP17L19D6RCP7 530 aa9.15□□□□□ -0.94
SKA2-203ENST00000578105 USP17L20D6RJB6 530 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms