RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 GALNT17Q6IS24 598 aa25.3■■□□□ 1.64
SMARCD2-206ENST00000577990 CYFIP1Q7L576 1253 aa25.3■■□□□ 1.64
SMARCD2-206ENST00000577990 FAM126BQ8IXS8 530 aa25.3■■□□□ 1.64
SMARCD2-206ENST00000577990 DAGLBQ8NCG7 672 aa25.3■■□□□ 1.64
SMARCD2-206ENST00000577990 GIMAP8Q8ND71 665 aaPredicted RBP25.3■■□□□ 1.64
SMARCD2-206ENST00000577990 CRYGNQ8WXF5 182 aa25.3■■□□□ 1.64
SMARCD2-206ENST00000577990 ZSCAN31Q96LW9 406 aaPredicted RBP25.3■■□□□ 1.64
SMARCD2-206ENST00000577990 BACH2Q9BYV9 841 aa25.3■■□□□ 1.64
SMARCD2-206ENST00000577990 BCAS3Q9H6U6 928 aa25.3■■□□□ 1.64
SMARCD2-206ENST00000577990 TLR3O15455 904 aaKnown RBP25.29■■□□□ 1.64
SMARCD2-206ENST00000577990 CYP3A4P08684 503 aa25.29■■□□□ 1.64
SMARCD2-206ENST00000577990 FDPSP14324 419 aaKnown RBP25.29■■□□□ 1.64
SMARCD2-206ENST00000577990 KCNA2P16389 499 aa25.29■■□□□ 1.64
SMARCD2-206ENST00000577990 ZNF76P36508 570 aa25.29■■□□□ 1.64
SMARCD2-206ENST00000577990 BLIDQ8IZY5 108 aa25.29■■□□□ 1.64
SMARCD2-206ENST00000577990 CYP2W1Q8TAV3 490 aa25.29■■□□□ 1.64
SMARCD2-206ENST00000577990 NOP56O00567 594 aaKnown RBP25.28■■□□□ 1.64
SMARCD2-206ENST00000577990 ST18O60284 1047 aa25.28■■□□□ 1.64
SMARCD2-206ENST00000577990 ATP9AO75110 1047 aa25.28■■□□□ 1.64
SMARCD2-206ENST00000577990 PPFIA4O75335 1185 aa25.28■■□□□ 1.64
SMARCD2-206ENST00000577990 ITGB8P26012 769 aa25.28■■□□□ 1.64
SMARCD2-206ENST00000577990 NPY5RQ15761 445 aa25.28■■□□□ 1.64
SMARCD2-206ENST00000577990 NBPF20Q3BBV1 942 aa25.28■■□□□ 1.64
SMARCD2-206ENST00000577990 Q7L0L9 218 aa25.28■■□□□ 1.64
SMARCD2-206ENST00000577990 CCDC83Q8IWF9 413 aa25.28■■□□□ 1.64
SMARCD2-206ENST00000577990 IL27Q8NEV9 243 aa25.28■■□□□ 1.64
SMARCD2-206ENST00000577990 KAT2BQ92831 832 aa25.28■■□□□ 1.64
SMARCD2-206ENST00000577990 ALG1Q9BT22 464 aa25.28■■□□□ 1.64
SMARCD2-206ENST00000577990 SH2B1Q9NRF2 756 aaPredicted RBP25.28■■□□□ 1.64
SMARCD2-206ENST00000577990 KCNH7Q9NS40 1196 aa25.28■■□□□ 1.64
SMARCD2-206ENST00000577990 TMEM39AQ9NV64 488 aa25.28■■□□□ 1.64
SMARCD2-206ENST00000577990 KCNJ14Q9UNX9 436 aa25.28■■□□□ 1.64
SMARCD2-206ENST00000577990 MEIS1O00470 390 aa25.27■■□□□ 1.64
SMARCD2-206ENST00000577990 KIAA0355O15063 1070 aa25.27■■□□□ 1.64
SMARCD2-206ENST00000577990 JAK2O60674 1132 aa25.27■■□□□ 1.64
SMARCD2-206ENST00000577990 ZNF286BP0CG31 522 aa25.27■■□□□ 1.64
SMARCD2-206ENST00000577990 NFRKBQ6P4R8 1299 aa25.27■■□□□ 1.64
SMARCD2-206ENST00000577990 NIPA1Q7RTP0 329 aa25.27■■□□□ 1.64
SMARCD2-206ENST00000577990 PHF20Q9BVI0 1012 aa25.27■■□□□ 1.64
SMARCD2-206ENST00000577990 PKD2L1Q9P0L9 805 aa25.27■■□□□ 1.64
SMARCD2-206ENST00000577990 M0R2N6 131 aa25.26■■□□□ 1.63
SMARCD2-206ENST00000577990 F2P00734 622 aa25.26■■□□□ 1.63
SMARCD2-206ENST00000577990 CD4P01730 458 aa25.26■■□□□ 1.63
SMARCD2-206ENST00000577990 CHMP4BP1P59074 171 aa25.26■■□□□ 1.63
SMARCD2-206ENST00000577990 FAM47CQ5HY64 1035 aa25.26■■□□□ 1.63
SMARCD2-206ENST00000577990 GPR20Q99678 358 aa25.26■■□□□ 1.63
SMARCD2-206ENST00000577990 KATNAL1Q9BW62 490 aa25.26■■□□□ 1.63
SMARCD2-206ENST00000577990 TBX21Q9UL17 535 aa25.26■■□□□ 1.63
SMARCD2-206ENST00000577990 FAM86B1E9PN63 330 aa25.25■■□□□ 1.63
SMARCD2-206ENST00000577990 FAM86B2P0C5J1 330 aa25.25■■□□□ 1.63
SMARCD2-206ENST00000577990 ARP10275 920 aa25.25■■□□□ 1.63
SMARCD2-206ENST00000577990 PSEN2P49810 448 aa25.25■■□□□ 1.63
SMARCD2-206ENST00000577990 SP4Q02446 784 aa25.25■■□□□ 1.63
SMARCD2-206ENST00000577990 PTPN11Q06124 597 aaPredicted RBP25.25■■□□□ 1.63
SMARCD2-206ENST00000577990 C9orf50Q5SZB4 431 aa25.25■■□□□ 1.63
SMARCD2-206ENST00000577990 AGO4Q9HCK5 861 aaKnown RBP25.25■■□□□ 1.63
SMARCD2-206ENST00000577990 GJB4Q9NTQ9 266 aa25.25■■□□□ 1.63
SMARCD2-206ENST00000577990 B4GALT4O60513 344 aa25.24■■□□□ 1.63
SMARCD2-206ENST00000577990 MFSD10Q14728 455 aa25.24■■□□□ 1.63
SMARCD2-206ENST00000577990 SHHQ15465 462 aa25.24■■□□□ 1.63
SMARCD2-206ENST00000577990 PLA2G4DQ86XP0 818 aa25.24■■□□□ 1.63
SMARCD2-206ENST00000577990 DEFB123Q8N688 67 aa25.24■■□□□ 1.63
SMARCD2-206ENST00000577990 PPP1R13LQ8WUF5 828 aa25.24■■□□□ 1.63
SMARCD2-206ENST00000577990 LLPHQ9BRT6 129 aaKnown RBP25.24■■□□□ 1.63
SMARCD2-206ENST00000577990 TRPV6Q9H1D0 765 aa25.24■■□□□ 1.63
SMARCD2-206ENST00000577990 TELO2Q9Y4R8 837 aa25.24■■□□□ 1.63
SMARCD2-206ENST00000577990 NFASCO94856 1347 aa25.23■■□□□ 1.63
SMARCD2-206ENST00000577990 IGLV3-22A0A075B6J6 115 aa25.23■■□□□ 1.63
SMARCD2-206ENST00000577990 LGALS2P05162 132 aa25.23■■□□□ 1.63
SMARCD2-206ENST00000577990 RAG1P15918 1043 aa25.23■■□□□ 1.63
SMARCD2-206ENST00000577990 CIITAP33076 1130 aa25.23■■□□□ 1.63
SMARCD2-206ENST00000577990 SETQ01105 290 aaPredicted RBP25.23■■□□□ 1.63
SMARCD2-206ENST00000577990 KRT25Q7Z3Z0 450 aa25.23■■□□□ 1.63
SMARCD2-206ENST00000577990 TBCKQ8TEA7 893 aa25.23■■□□□ 1.63
SMARCD2-206ENST00000577990 SDF4Q9BRK5 362 aa25.23■■□□□ 1.63
SMARCD2-206ENST00000577990 C16orf70Q9BSU1 422 aa25.23■■□□□ 1.63
SMARCD2-206ENST00000577990 JPH1Q9HDC5 661 aaPredicted RBP25.23■■□□□ 1.63
SMARCD2-206ENST00000577990 HAS3O00219 553 aa25.22■■□□□ 1.63
SMARCD2-206ENST00000577990 USP11P51784 963 aa25.22■■□□□ 1.63
SMARCD2-206ENST00000577990 ITGB3BPQ13352 177 aaPredicted RBP25.22■■□□□ 1.63
SMARCD2-206ENST00000577990 KIAA0753Q2KHM9 967 aa25.22■■□□□ 1.63
SMARCD2-206ENST00000577990 SESTD1Q86VW0 696 aa25.22■■□□□ 1.63
SMARCD2-206ENST00000577990 TRMT13Q9NUP7 481 aaKnown RBP25.22■■□□□ 1.63
SMARCD2-206ENST00000577990 SUPT20HL2P0C7V6 817 aa25.21■■□□□ 1.63
SMARCD2-206ENST00000577990 NONOQ15233 471 aaKnown RBP eCLIP25.21■■□□□ 1.63
SMARCD2-206ENST00000577990 GPR153Q6NV75 609 aa25.21■■□□□ 1.63
SMARCD2-206ENST00000577990 SEPT1Q8WYJ6 367 aa25.21■■□□□ 1.63
SMARCD2-206ENST00000577990 SLC9A2Q9UBY0 812 aa25.21■■□□□ 1.63
SMARCD2-206ENST00000577990 EDIL3O43854 480 aa25.2■■□□□ 1.62
SMARCD2-206ENST00000577990 TIMP1P01033 207 aa25.2■■□□□ 1.62
SMARCD2-206ENST00000577990 EPHB4P54760 987 aa25.2■■□□□ 1.62
SMARCD2-206ENST00000577990 TRIM29Q14134 588 aa25.2■■□□□ 1.62
SMARCD2-206ENST00000577990 PRR16Q569H4 304 aa25.2■■□□□ 1.62
SMARCD2-206ENST00000577990 UTP14CQ5TAP6 766 aaKnown RBP25.2■■□□□ 1.62
SMARCD2-206ENST00000577990 C7orf31Q8N865 590 aa25.2■■□□□ 1.62
SMARCD2-206ENST00000577990 BRMS1Q9HCU9 246 aa25.2■■□□□ 1.62
SMARCD2-206ENST00000577990 CCDC194A0A1B0GVG4 234 aa25.19■■□□□ 1.62
SMARCD2-206ENST00000577990 GSTTP1A0A1W2PQM5 241 aa25.19■■□□□ 1.62
SMARCD2-206ENST00000577990 H3BRB1 525 aa25.19■■□□□ 1.62
SMARCD2-206ENST00000577990 CD2BP2O95400 341 aaKnown RBP25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms