RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 LINC00271P0C7V0 271 aa16.57■□□□□ 0.24
PPP4R1-206ENST00000577779 NUBP1P53384 320 aa16.57■□□□□ 0.24
PPP4R1-206ENST00000577779 CTDSPL2Q05D32 466 aa16.57■□□□□ 0.24
PPP4R1-206ENST00000577779 USH1GQ495M9 461 aa16.57■□□□□ 0.24
PPP4R1-206ENST00000577779 PANK1Q8TE04 598 aa16.57■□□□□ 0.24
PPP4R1-206ENST00000577779 NSUN6Q8TEA1 469 aaKnown RBP16.57■□□□□ 0.24
PPP4R1-206ENST00000577779 APBB2Q92870 758 aa16.57■□□□□ 0.24
PPP4R1-206ENST00000577779 ATP6V0A1Q93050 837 aa16.57■□□□□ 0.24
PPP4R1-206ENST00000577779 RPGRIP1Q96KN7 1286 aa16.57■□□□□ 0.24
PPP4R1-206ENST00000577779 OSBPL7Q9BZF2 842 aa16.57■□□□□ 0.24
PPP4R1-206ENST00000577779 ECHDC1Q9NTX5 307 aa16.57■□□□□ 0.24
PPP4R1-206ENST00000577779 CLEC1BQ9P126 229 aa16.57■□□□□ 0.24
PPP4R1-206ENST00000577779 USP15Q9Y4E8 981 aaPredicted RBP16.57■□□□□ 0.24
PPP4R1-206ENST00000577779 MRVI1Q9Y6F6 885 aa16.57■□□□□ 0.24
PPP4R1-206ENST00000577779 EP300Q09472 2414 aaPredicted RBP16.57■□□□□ 0.24
PPP4R1-206ENST00000577779 C17orf102A2RUQ5 167 aa16.56■□□□□ 0.24
PPP4R1-206ENST00000577779 GALR2O43603 387 aaPredicted RBP16.56■□□□□ 0.24
PPP4R1-206ENST00000577779 NOVP48745 357 aa16.56■□□□□ 0.24
PPP4R1-206ENST00000577779 COASYQ13057 564 aa16.56■□□□□ 0.24
PPP4R1-206ENST00000577779 EFHBQ8N7U6 833 aa16.56■□□□□ 0.24
PPP4R1-206ENST00000577779 CLP1Q92989 425 aaKnown RBP16.56■□□□□ 0.24
PPP4R1-206ENST00000577779 TAAR1Q96RJ0 339 aa16.56■□□□□ 0.24
PPP4R1-206ENST00000577779 IWS1Q96ST2 819 aa16.56■□□□□ 0.24
PPP4R1-206ENST00000577779 PHF7Q9BWX1 381 aaPredicted RBP16.56■□□□□ 0.24
PPP4R1-206ENST00000577779 PPFIA4O75335 1185 aa16.55■□□□□ 0.24
PPP4R1-206ENST00000577779 TOP1P11387 765 aaKnown RBP16.55■□□□□ 0.24
PPP4R1-206ENST00000577779 HOXD8P13378 290 aaPredicted RBP16.55■□□□□ 0.24
PPP4R1-206ENST00000577779 ICAM3P32942 547 aa16.55■□□□□ 0.24
PPP4R1-206ENST00000577779 NBL1P41271 181 aa16.55■□□□□ 0.24
PPP4R1-206ENST00000577779 RMDN3Q96TC7 470 aa16.55■□□□□ 0.24
PPP4R1-206ENST00000577779 LRRCC1Q9C099 1032 aa16.55■□□□□ 0.24
PPP4R1-206ENST00000577779 KMT2BQ9UMN6 2715 aaPredicted RBP16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 TPRP12270 2363 aaKnown RBP16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 SMARCA5O60264 1052 aaPredicted RBP16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 SORBS3O60504 671 aa16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 CAND2O75155 1236 aa16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 EIF3JO75822 258 aaKnown RBP16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 PDGFBP01127 241 aaPredicted RBP16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 CAMK1Q14012 370 aa16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 BTG3Q14201 252 aaPredicted RBP16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 PTPN21Q16825 1174 aa16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 ADGRD2Q7Z7M1 963 aa16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 SYTL5Q8TDW5 730 aaPredicted RBP16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 TBC1D5Q92609 795 aa16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 SPATA33Q96N06 139 aa16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 SEC62Q99442 399 aaKnown RBP16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 TMEM47Q9BQJ4 181 aa16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 PLVAPQ9BX97 442 aa16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 COL20A1Q9P218 1284 aa16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 BARX2Q9UMQ3 279 aaPredicted RBP16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 PLAGL2Q9UPG8 496 aa16.54■□□□□ 0.24
PPP4R1-206ENST00000577779 TREHO43280 583 aa16.53■□□□□ 0.24
PPP4R1-206ENST00000577779 PDHBP11177 359 aa16.53■□□□□ 0.24
PPP4R1-206ENST00000577779 EIF2AK2P19525 551 aaKnown RBP16.53■□□□□ 0.24
PPP4R1-206ENST00000577779 NRIP1P48552 1158 aa16.53■□□□□ 0.24
PPP4R1-206ENST00000577779 ARHGEF16Q5VV41 709 aa16.53■□□□□ 0.24
PPP4R1-206ENST00000577779 ZBTB33Q86T24 672 aa16.53■□□□□ 0.24
PPP4R1-206ENST00000577779 SMIM10L2AP0DMW4 78 aa16.52■□□□□ 0.24
PPP4R1-206ENST00000577779 SMIM10L2BP0DMW5 78 aa16.52■□□□□ 0.24
PPP4R1-206ENST00000577779 DNAJB1P25685 340 aa16.52■□□□□ 0.24
PPP4R1-206ENST00000577779 ZNF543Q08ER8 600 aa16.52■□□□□ 0.24
PPP4R1-206ENST00000577779 HSDL1Q3SXM5 330 aa16.52■□□□□ 0.24
PPP4R1-206ENST00000577779 MYSM1Q5VVJ2 828 aa16.52■□□□□ 0.24
PPP4R1-206ENST00000577779 RBM23Q86U06 439 aaKnown RBP16.52■□□□□ 0.24
PPP4R1-206ENST00000577779 NKD2Q969F2 451 aaPredicted RBP16.52■□□□□ 0.24
PPP4R1-206ENST00000577779 GPATCH3Q96I76 525 aa16.52■□□□□ 0.24
PPP4R1-206ENST00000577779 RIPOR3Q96MK2 946 aa16.52■□□□□ 0.24
PPP4R1-206ENST00000577779 C16orf70Q9BSU1 422 aa16.52■□□□□ 0.24
PPP4R1-206ENST00000577779 MAF1Q9H063 256 aa16.52■□□□□ 0.24
PPP4R1-206ENST00000577779 RC3H2Q9HBD1 1191 aaKnown RBP16.52■□□□□ 0.24
PPP4R1-206ENST00000577779 CACNA1GO43497 2377 aa16.52■□□□□ 0.23
PPP4R1-206ENST00000577779 GLP2RO95838 553 aa16.51■□□□□ 0.23
PPP4R1-206ENST00000577779 HOXC8P31273 242 aa16.51■□□□□ 0.23
PPP4R1-206ENST00000577779 CELF3Q5SZQ8 465 aaKnown RBP16.51■□□□□ 0.23
PPP4R1-206ENST00000577779 TSHZ3Q63HK5 1081 aa16.51■□□□□ 0.23
PPP4R1-206ENST00000577779 FRMD5Q7Z6J6 570 aa16.51■□□□□ 0.23
PPP4R1-206ENST00000577779 ADSSL1Q8N142 457 aa16.51■□□□□ 0.23
PPP4R1-206ENST00000577779 P2RX5Q93086 422 aa16.51■□□□□ 0.23
PPP4R1-206ENST00000577779 TOMM22Q9NS69 142 aa16.51■□□□□ 0.23
PPP4R1-206ENST00000577779 ABCB11O95342 1321 aa16.5■□□□□ 0.23
PPP4R1-206ENST00000577779 H3BRB1 525 aa16.5■□□□□ 0.23
PPP4R1-206ENST00000577779 ORC4O43929 436 aa16.5■□□□□ 0.23
PPP4R1-206ENST00000577779 GGPS1O95749 300 aa16.5■□□□□ 0.23
PPP4R1-206ENST00000577779 ITGB1P05556 798 aa16.5■□□□□ 0.23
PPP4R1-206ENST00000577779 NR3C2P08235 984 aa16.5■□□□□ 0.23
PPP4R1-206ENST00000577779 ATF7P17544 494 aaPredicted RBP16.5■□□□□ 0.23
PPP4R1-206ENST00000577779 MCF2L2Q86YR7 1114 aa16.5■□□□□ 0.23
PPP4R1-206ENST00000577779 SPPL3Q8TCT6 385 aa16.5■□□□□ 0.23
PPP4R1-206ENST00000577779 ZNF689Q96CS4 500 aaPredicted RBP16.5■□□□□ 0.23
PPP4R1-206ENST00000577779 RNPEPQ9H4A4 650 aa16.5■□□□□ 0.23
PPP4R1-206ENST00000577779 TUT1Q9H6E5 874 aaKnown RBP16.5■□□□□ 0.23
PPP4R1-206ENST00000577779 ACACBO00763 2458 aa16.5■□□□□ 0.23
PPP4R1-206ENST00000577779 NAALADL2Q58DX5 795 aa16.49■□□□□ 0.23
PPP4R1-206ENST00000577779 RRP12Q5JTH9 1297 aaKnown RBP16.49■□□□□ 0.23
PPP4R1-206ENST00000577779 MCTP2Q6DN12 878 aa16.49■□□□□ 0.23
PPP4R1-206ENST00000577779 KCNV1Q6PIU1 500 aa16.49■□□□□ 0.23
PPP4R1-206ENST00000577779 PXMP2Q9NR77 195 aa16.49■□□□□ 0.23
PPP4R1-206ENST00000577779 ZBTB40Q9NUA8 1239 aa16.49■□□□□ 0.23
PPP4R1-206ENST00000577779 ANAPC4Q9UJX5 808 aa16.49■□□□□ 0.23
PPP4R1-206ENST00000577779 MRPL42Q9Y6G3 142 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms