RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 NOP56O00567 594 aaKnown RBP11.86□□□□□ -0.51
RNF43-203ENST00000577716 AP5Z1O43299 807 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 PALMO75781 387 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 NSFP46459 744 aaKnown RBP11.86□□□□□ -0.51
RNF43-203ENST00000577716 NT5C2P49902 561 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 LIG4P49917 911 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 RASSF2P50749 326 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 PDIA6Q15084 440 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 C10orf76Q5T2E6 689 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 ZNF710Q8N1W2 664 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 ZNF653Q96CK0 615 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 NT5C1BQ96P26 610 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 GPR101Q96P66 508 aaPredicted RBP11.86□□□□□ -0.51
RNF43-203ENST00000577716 USP21Q9UK80 565 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 MROH7-TTC4A0A0A0MT08 1334 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 PNPLA7Q6ZV29 1317 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 HIP1RO75146 1068 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 TRIM37O94972 964 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 TROVE2P10155 538 aaKnown RBP eCLIP11.86□□□□□ -0.51
RNF43-203ENST00000577716 ARL1P40616 181 aaPredicted RBP11.86□□□□□ -0.51
RNF43-203ENST00000577716 USP14P54578 494 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 AOC3Q16853 763 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 LGSNQ5TDP6 509 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 POMGNT1Q8WZA1 660 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 RAB20Q9NX57 234 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 ADD3Q9UEY8 706 aaKnown RBP11.86□□□□□ -0.51
RNF43-203ENST00000577716 KCNG1Q9UIX4 513 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 UTYO14607 1347 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 PNMA6FA0A0J9YX94 578 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 PVALEFA0A1B0GWK0 134 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 SLCO1A2P46721 670 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 ITIH3Q06033 890 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 ARHGAP24Q8N264 748 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 TTC16Q8NEE8 873 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 FMO2Q99518 471 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 PCIF1Q9H4Z3 704 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 GJA3Q9Y6H8 435 aa11.86□□□□□ -0.51
RNF43-203ENST00000577716 BBOX1O75936 387 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 SUN1O94901 812 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 ATP1A1P05023 1023 aaKnown RBP11.85□□□□□ -0.51
RNF43-203ENST00000577716 ZKSCAN8Q15776 578 aaPredicted RBP11.85□□□□□ -0.51
RNF43-203ENST00000577716 NFRKBQ6P4R8 1299 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.85□□□□□ -0.51
RNF43-203ENST00000577716 TCP11Q8WWU5 503 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 TMOD4Q9NZQ9 345 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 DIP2AQ14689 1571 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 A0A1W2PQC6 194 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 EIF3CLB5ME19 914 aaKnown RBP11.85□□□□□ -0.51
RNF43-203ENST00000577716 GDF11O95390 407 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 HOXA7P31268 230 aaPredicted RBP11.85□□□□□ -0.51
RNF43-203ENST00000577716 PTK2Q05397 1052 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 CCDC38Q502W7 563 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 RAD9BQ6WBX8 426 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 PALM2Q8IXS6 379 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 SRBD1Q8N5C6 995 aaKnown RBP11.85□□□□□ -0.51
RNF43-203ENST00000577716 EIF3CQ99613 913 aaKnown RBP11.85□□□□□ -0.51
RNF43-203ENST00000577716 ZNF577Q9BSK1 485 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 USP32Q8NFA0 1604 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 ESYT3A0FGR9 886 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 I3L4J1 428 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 ZSCAN20P17040 1043 aaPredicted RBP11.85□□□□□ -0.51
RNF43-203ENST00000577716 SLC8A1P32418 973 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 GFPT1Q06210 699 aaPredicted RBP11.85□□□□□ -0.51
RNF43-203ENST00000577716 RASA3Q14644 834 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 FAM83BQ5T0W9 1011 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 FAM182BQ5T319 152 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 CCDC110Q8TBZ0 833 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 RSAD2Q8WXG1 361 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 NACC1Q96RE7 527 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 ANO3Q9BYT9 981 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 AZI2Q9H6S1 392 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 PARVGQ9HBI0 331 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 CD2APQ9Y5K6 639 aa11.85□□□□□ -0.51
RNF43-203ENST00000577716 HNRNPDLO14979 420 aaKnown RBP11.84□□□□□ -0.51
RNF43-203ENST00000577716 SERPINB2P05120 415 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 MFAP3P55082 362 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 ADCY1Q08828 1119 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 NR1I3Q14994 352 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 SNCBQ16143 134 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 MAP7D1Q3KQU3 841 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 GLE1Q53GS7 698 aaKnown RBP11.84□□□□□ -0.51
RNF43-203ENST00000577716 KAZNQ674X7 775 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 CASC4Q6P4E1 433 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 PPP4R3CPQ6ZMV5 832 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 RNF10Q8N5U6 811 aaKnown RBP11.84□□□□□ -0.51
RNF43-203ENST00000577716 NEK9Q8TD19 979 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 OSBPL9Q96SU4 736 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 WDR11Q9BZH6 1224 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 CCPG1Q9ULG6 757 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 HPS5Q9UPZ3 1129 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 SPATA31D1Q6ZQQ2 1576 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 USP17L5A8MUK1 530 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 HMGB1P1B2RPK0 211 aaPredicted RBP11.84□□□□□ -0.51
RNF43-203ENST00000577716 CCDC188H7C350 402 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 BMP3P12645 472 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 DMP1Q13316 513 aaPredicted RBP11.84□□□□□ -0.51
RNF43-203ENST00000577716 E2F5Q15329 346 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 E2F4Q16254 413 aa11.84□□□□□ -0.51
RNF43-203ENST00000577716 TAB3Q8N5C8 712 aaPredicted RBP11.84□□□□□ -0.51
RNF43-203ENST00000577716 COG1Q8WTW3 980 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms