RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 SLC39A14Q15043 492 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 STK38Q15208 465 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 SLC9C1Q4G0N8 1177 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 DUSP28Q4G0W2 176 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 IQSEC1Q6DN90 963 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 SLFN12Q8IYM2 578 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 LINC00301Q8NCQ3 95 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 FAM20AQ96MK3 541 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 SENP7Q9BQF6 1050 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 BCAS3Q9H6U6 928 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 RTN4Q9NQC3 1192 aaKnown RBP9.65□□□□□ -0.86
PRPF8-213ENST00000576407 FAM184BQ9ULE4 1060 aa9.65□□□□□ -0.86
PRPF8-213ENST00000576407 CENPFP49454 3210 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 NFASCO94856 1347 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 DDX39AO00148 427 aaKnown RBP9.64□□□□□ -0.87
PRPF8-213ENST00000576407 SPTLC2O15270 562 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 SEPT4O43236 478 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 SORBS3O60504 671 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 GAS7O60861 476 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 PSMD10O75832 226 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 GGPS1O95749 300 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 AKR1A1P14550 325 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 PTGS1P23219 599 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 MARCKSP29966 332 aaPredicted RBP9.64□□□□□ -0.87
PRPF8-213ENST00000576407 CLCN1P35523 988 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 PRPHP41219 470 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 NEDD9Q14511 834 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 HSP90AA2PQ14568 343 aaPredicted RBP9.64□□□□□ -0.87
PRPF8-213ENST00000576407 NFKBIBQ15653 356 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 IL17AQ16552 155 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 CELF3Q5SZQ8 465 aaKnown RBP9.64□□□□□ -0.87
PRPF8-213ENST00000576407 GJC2Q5T442 439 aaPredicted RBP9.64□□□□□ -0.87
PRPF8-213ENST00000576407 LRCH2Q5VUJ6 765 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 ARL6IP4Q66PJ3 421 aaKnown RBP9.64□□□□□ -0.87
PRPF8-213ENST00000576407 CYFIP1Q7L576 1253 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 GIMAP8Q8ND71 665 aaPredicted RBP9.64□□□□□ -0.87
PRPF8-213ENST00000576407 LEO1Q8WVC0 666 aaPredicted RBP9.64□□□□□ -0.87
PRPF8-213ENST00000576407 COPS5Q92905 334 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 LENG1Q96BZ8 264 aaPredicted RBP9.64□□□□□ -0.87
PRPF8-213ENST00000576407 MAP7D2Q96T17 732 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 RIT2Q99578 217 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 SDF4Q9BRK5 362 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 SCAND2PQ9GZW5 306 aaPredicted RBP9.64□□□□□ -0.87
PRPF8-213ENST00000576407 ZMYND15Q9H091 742 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 TTC12Q9H892 705 aaPredicted RBP9.64□□□□□ -0.87
PRPF8-213ENST00000576407 HMX1Q9NP08 348 aaPredicted RBP9.64□□□□□ -0.87
PRPF8-213ENST00000576407 TBC1D22BQ9NU19 505 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 RNF216Q9NWF9 866 aaPredicted RBP9.64□□□□□ -0.87
PRPF8-213ENST00000576407 RCOR1Q9UKL0 485 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 PCDHA12Q9UN75 941 aa9.64□□□□□ -0.87
PRPF8-213ENST00000576407 MORC2Q9Y6X9 1032 aaPredicted RBP9.64□□□□□ -0.87
PRPF8-213ENST00000576407 NKRFO15226 690 aaKnown RBP eCLIP9.63□□□□□ -0.87
PRPF8-213ENST00000576407 PPP6R2O75170 966 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 FARP2O94887 1054 aaPredicted RBP9.63□□□□□ -0.87
PRPF8-213ENST00000576407 GH1P01241 217 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 TECP42680 631 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 ARHGAP1Q07960 439 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 SPIRE1Q08AE8 756 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 METTL7BQ6UX53 244 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 DTHD1Q6ZMT9 781 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 CLEC17AQ6ZS10 378 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 DHX37Q8IY37 1157 aaKnown RBP9.63□□□□□ -0.87
PRPF8-213ENST00000576407 KCNG4Q8TDN1 519 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 SPATA32Q96LK8 384 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 TEKT3Q9BXF9 490 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 MLXIPQ9HAP2 919 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 GDPD2Q9HCC8 539 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 JPH1Q9HDC5 661 aaPredicted RBP9.63□□□□□ -0.87
PRPF8-213ENST00000576407 SLC9A2Q9UBY0 812 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 FBXO2Q9UK22 296 aaPredicted RBP9.63□□□□□ -0.87
PRPF8-213ENST00000576407 VAV3Q9UKW4 847 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 GNEQ9Y223 722 aaKnown RBP9.63□□□□□ -0.87
PRPF8-213ENST00000576407 TELO2Q9Y4R8 837 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 DOCK5Q9H7D0 1870 aa9.63□□□□□ -0.87
PRPF8-213ENST00000576407 POTEFA5A3E0 1075 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 VWA3AA6NCI4 1184 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 DYNC1LI2O43237 492 aaPredicted RBP9.62□□□□□ -0.87
PRPF8-213ENST00000576407 CHMP2AO43633 222 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 DUSP11O75319 330 aaKnown RBP9.62□□□□□ -0.87
PRPF8-213ENST00000576407 CCNE2O96020 404 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 MYCP01106 439 aaPredicted RBP9.62□□□□□ -0.87
PRPF8-213ENST00000576407 TPM2P07951 284 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 RARBP10826 455 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 ME1P48163 572 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 FXR2P51116 673 aaKnown RBP eCLIP9.62□□□□□ -0.871e-13■■■■■ 30.6
PRPF8-213ENST00000576407 KRT76Q01546 638 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 SP4Q02446 784 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 GRIN1Q05586 938 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 PPP2R5CQ13362 524 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 LAMC2Q13753 1193 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 MTFR1Q15390 333 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 TMEM266Q2M3C6 531 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 B3GNT9Q6UX72 402 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 TLK2Q86UE8 772 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 KRI1Q8N9T8 703 aaKnown RBP9.62□□□□□ -0.87
PRPF8-213ENST00000576407 EMID1Q96A84 441 aaPredicted RBP9.62□□□□□ -0.87
PRPF8-213ENST00000576407 FERMT2Q96AC1 680 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 ZNF333Q96JL9 665 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 SPATA33Q96N06 139 aa9.62□□□□□ -0.87
PRPF8-213ENST00000576407 MCOLN1Q9GZU1 580 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms